Impact of biodegradation of organic matters on ammonia oxidation in compost

Bioresource Technology

Volumn 136, Issue , 2013, Pages 49-57

  Zeng, Yang ^a,b   De Guardia, Amaury ^a   Ziebal, Christine ^a   De Macedo, Flávia Junqueira ^a   Dabert, Patrick ^a  

^a Cemagref   (France)

^b UNIVERSITÉ EUROPÉENNE DE BRETAGNE   (France)

Author keywords

Ammonia oxidizing archaea; Ammonia oxidizing bacteria; Composting; Nitrification; Nitrous oxide

Indexed keywords

AMMONIA; BACTERIA; BIODEGRADATION; BIOGEOCHEMISTRY; BIOLOGICAL MATERIALS; MICROBIOLOGY; NITRIFICATION; NITROGEN; NITROGEN OXIDES; ORGANIC COMPOUNDS; OXIDATION; REACTION INTERMEDIATES;

AMMONIA OXIDIZING BACTERIA; AMMONIA-OXIDIZING ARCHAEA; ELEVATED TEMPERATURE; INTERMEDIATE TEMPERATURES; NITROGEN MASS BALANCE; NITROUS OXIDE; NITROUS OXIDE EMISSIONS; POSSIBLE MECHANISMS;

COMPOSTING;

AMMONIA; NITRATE; NITRITE; NITROGEN; NITROUS OXIDE; ORGANIC MATTER;

AMMONIA; BACTERIUM; BIODEGRADATION; COMPOST; COMPOSTING; HIGH TEMPERATURE; MICROBIAL ACTIVITY; MICROBIAL ECOLOGY; NITRATE; NITRIFICATION; NITRITE; ORGANIC MATTER; OXIDATION; POPULATION DYNAMICS; REACTION KINETICS;

ARTICLE; BIODEGRADATION; COMPOST; OXIDATION; PRIORITY JOURNAL; TEMPERATURE;

NITROSOMONADALES;

EID: 84876308366     PISSN: 09608524     EISSN: 18732976     Source Type: Journal    
DOI: 10.1016/j.biortech.2013.02.038     Document Type: Article

References (35)

1. Banerjee S., Siciliano S.D. Factors driving potential ammonia oxidation in Canadian arctic ecosystems: does spatial scale matter?. Applied and Environmental Microbiology 2012, 78(2):346-353.
2. Bengtsson G., Bengtson P., Mansson K.F. Gross nitrogen mineralization-, immobilization-, and nitrification rates as a function of soil C/N ratio and microbial activity. Soil Biology & Biochemistry 2003, 35(1):143-154.
3. Canfield D.E., Glazer A.N., Falkowski P.G. The evolution and future of earth's nitrogen cycle. Science 2010, 330(6001):192-196.
4. Chandran K., Stein L.Y., Klotz M.G., van Loosdrecht M.C.M. Nitrous oxide production by lithotrophic ammonia-oxidizing bacteria and implications for engineered nitrogen-removal systems. Biochemical Society Transactions 2011, 39:1832-1837.
5. de Guardia A., Mallard P., Teglia C., Marin A., Le Pape C., Launay M., Benoist J.C., Petiot C. Comparison of five organic wastes regarding their behaviour during composting: Part 2, nitrogen dynamic. Waste Management 2010, 30(3):415-425.
6. 2O emissions from biological nitrogen removal systems. Current Opinion in Biotechnology 2012, 23(3):474-482.
7. Dore J.E., Popp B.N., Karl D.M., Sansone F.J. A large source of atmospheric nitrous oxide from subtropical North Pacific surface waters. Nature 1998, 396(6706):63-66.
8. Eklind Y., Kirchmann H. Composting and storage of organic household waste with different litter amendments. II: nitrogen turnover and losses. Bioresource Technology 2000, 74(2):125-133.
9. Gieseke A., Bjerrum L., Wagner M., Amann R. Structure and activity of multiple nitrifying bacterial populations co-existing in a biofilm. Environmental Microbiology 2003, 5(5):355-369.
10. Gubry-Rangin C., Hai B., Quince C., Engel M., Thomson B.C., James P., Schloter M., Griffiths R.I., Prosser J.I., Nicol G.W. Niche specialization of terrestrial archaeal ammonia oxidizers. Proceedings of the National Academy of Sciences of the United States of America 2011, 108(52):21206-21211.
11. 2O in a compost reactor treating organic household waste. Journal of Applied Microbiology 2009, 106(5):1502-1511.
12. Kim D.J., Lee D.I., Keller J. Effect of temperature and free ammonia on nitrification and nitrite accumulation in landfill leachate and analysis of its nitrifying bacterial community by FISH. Bioresource Technology 2006, 97(3):459-468.
13. Konneke M., Bernhard A.E., de la Torre J.R., Walker C.B., Waterbury J.B., Stahl D.A. Isolation of an autotrophic ammonia-oxidizing marine archaeon. Nature 2005, 437(7058):543-546.
14. Kowalchuk G.A., Stephen J.R. Ammonia-oxidizing bacteria: a model for molecular microbial ecology. Annual Review of Microbiology 2001, 55:485-529.
15. Kowalchuk G.A., Naoumenko Z.S., Derikx P.J.L., Felske A., Stephen J.R., Arkhipchenko I.A. Molecular analysis of ammonia-oxidizing bacteria of the beta subdivision of the class Proteobacteria in compost and composted materials. Applied and Environmental Microbiology 1999, 65(2):396-403.
16. Levicnik-Hofferle S., Nicol G.W., Ausec L., Mandic-Mulec I., Prosser J.I. Stimulation of thaumarchaeal ammonia oxidation by ammonia derived from organic nitrogen but not added inorganic nitrogen. FEMS Microbiology Ecology 2012, 80(1):114-123.
17. Ling J., Chen S.L. Impact of organic carbon on nitrification performance of different biofilters. Aquacultural Engineering 2005, 33(2):150-162.
18. Lu L., Han W.Y., Zhang J.B., Wu Y.C., Wang B.Z., Lin X.G., Zhu J.G., Cai Z.C., Jia Z.J. Nitrification of archaeal ammonia oxidizers in acid soils is supported by hydrolysis of urea. ISME Journal 2012, 6(10):1978-1984.
19. Maeda K., Toyoda S., Shimojima R., Osada T., Hanajima D., Morioka R., Yoshida N. Source of nitrous oxide emissions during the cow manure composting process as revealed by isotopomer analysis of and amoA abundance in betaproteobacterial ammonia-oxidizing bacteria. Applied and Environmental Microbiology 2010, 76(5):1555-1562.
20. Martens-Habbena W., Berube P.M., Urakawa H., de la Torre J.R., Stahl D.A. Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria. Nature 2009, 461(7266):976-979.
21. Mussmann M., Brito I., Pitcher A., Damste J.S.S., Hatzenpichler R., Richter A., Nielsen J.L., Nielsen P.H., Muller A., Daims H., Wagner M., Head I.M. Thaumarchaeotes abundant in refinery nitrifying sludges express amoA but are not obligate autotrophic ammonia oxidizers. Proceedings of the National Academy of Sciences of the United States of America 2011, 108(40):16771-16776.
22. Nogueira R., Melo L.F., Purkhold U., Wuertz S., Wagner M. Nitrifying and heterotrophic population dynamics in biofilm reactors: effects of hydraulic retention time and the presence of organic carbon. Water Research 2002, 36(2):469-481.
23. Racz L., Datta T., Goel R. Effect of organic carbon on ammonia oxidizing bacteria in a mixed culture. Bioresource Technology 2010, 101(16):6454-6460.
24. Sanchez-Monedero M.A., Roig A., Paredes C., Bernal M.P. Nitrogen transformation during organic waste composting by the Rutgers system and its effects on pH, EC and maturity of the composting mixtures. Bioresource Technology 2001, 78(3):301-308.
25. Schleper C. Ammonia oxidation: different niches for bacteria and archaea?. ISME Journal 2010, 4(9):1092-1094.
26. Strauss E.A., Lamberti G.A. Regulation of nitrification in aquatic sediments by organic carbon. Limnology and Oceanography 2000, 45(8):1854-1859.
27. Tourna M., Stieglmeier M., Spang A., Konneke M., Schintlmeister A., Urich T., Engel M., Schloter M., Wagner M., Richter A., Schleper C. Nitrososphaera viennensis, an ammonia oxidizing archaeon from soil. Proceedings of the National Academy of Sciences of the United States of America 2011, 108(20):8420-8425.
28. Tremier A., de Guardia A., Massiani C., Paul E., Martel J.L. A respirometric method for characterising the organic composition and biodegradation kinetics and the temperature influence on the biodegradation kinetics, for a mixture of sludge and bulking agent to be co-composted. Bioresource Technology 2005, 96(2):169-180.
29. Verhagen F.J.M., Laanbroek H.J. Competition for ammonium between nitrifying and heterotrophic bacteria in dual energy-limited chemostats. Applied and Environmental Microbiology 1991, 57(11):3255-3263.
30. Yamamoto N., Otawa K., Nakai Y. Diversity and abundance of ammonia-oxidizing bacteria and ammonia-oxidizing archaea during cattle manure composting. Microbial Ecology 2010, 60(4):807-815.
31. Yamamoto N., Asano R., Yoshii H., Otawa K., Nakai Y. Archaeal community dynamics and detection of ammonia-oxidizing archaea during composting of cattle manure using culture-independent DNA analysis. Applied Microbiology and Biotechnology 2011, 90(4):1501-1510.
32. Yao H., Gao Y., Nicol G.W., Campbell C.D., Prosser J.I., Zhang L., Han W., Singh B.K. Links between ammonia oxidizer community structure, abundance, and nitrification potential in acidic soils. Applied and Environmental Microbiology 2011, 77(13):4618-4625.
33. Zeng Y., de Guardia A., Daumoin M., Benoist J.-C. Characterizing the transformation and transfer of nitrogen during the aerobic treatment of organic wastes and digestates. Waste Management 2012, 32(12):2239-2247.
34. Zeng Y., De Guardia A., Ziebal C., De Macedo F.J., Dabert P. Nitrification and microbiological evolution during aerobic treatment of municipal solid wastes. Bioresource Technology 2012, 110:144-152.
35. Zumft W.G. Cell biology and molecular basis of denitrification. Microbiology and Molecular Biology Reviews 1997, 61(4):533-616.