메뉴 건너뛰기




Volumn 10, Issue 2, 2013, Pages

Swimming motility plays a key role in the stochastic dynamics of cell clumping

Author keywords

[No Author keywords available]

Indexed keywords

AZOSPIRILLUM BRASILENSE; BACTERIA (MICROORGANISMS);

EID: 84876224456     PISSN: 14783967     EISSN: 14783975     Source Type: Journal    
DOI: 10.1088/1478-3975/10/2/026005     Document Type: Article
Times cited : (8)

References (46)
  • 2
    • 67749098104 scopus 로고    scopus 로고
    • Chlamydomonas swims with 'two gears' in a eukaryotic version of run-and-tumble locomotion
    • 10.1126/science.1172667 0036-8075
    • Polin M, Tuval I, Drescher K, Gollub J P and Goldstein R E 2009 Chlamydomonas swims with 'two gears' in a eukaryotic version of run-and-tumble locomotion Science 325 487-90
    • (2009) Science , vol.325 , Issue.5939 , pp. 487-490
    • Polin, M.1    Tuval, I.2    Drescher, K.3    Gollub, J.P.4    Goldstein, R.E.5
  • 3
    • 84890506631 scopus 로고
    • Life at low Reynolds number
    • 10.1119/1.10903 0002-9505
    • Purcell E M 1977 Life at low Reynolds number Am. J. Phys. 45 3-11
    • (1977) Am. J. Phys. , vol.45 , Issue.1 , pp. 3-11
    • Purcell, E.M.1
  • 4
    • 0034641740 scopus 로고    scopus 로고
    • A model for individual and collective cell movement in Dictyostelium discoideum
    • 10.1073/pnas.97.19.10448 0027-8424
    • Palsson E and Othmer H G 2000 A model for individual and collective cell movement in Dictyostelium discoideum Proc. Natl Acad. Sci. USA 97 10448-53
    • (2000) Proc. Natl Acad. Sci. USA , vol.97 , Issue.19 , pp. 10448-10453
    • Palsson, E.1    Othmer, H.G.2
  • 5
    • 33744981593 scopus 로고    scopus 로고
    • Microbial sciences: The superficial life of microbes
    • 10.1038/441300a 0028-0836
    • Kolter R and Greenberg E P 2006 Microbial sciences: the superficial life of microbes Nature 441 300-2
    • (2006) Nature , vol.441 , Issue.7091 , pp. 300-302
    • Kolter, R.1    Greenberg, E.P.2
  • 6
    • 0019967067 scopus 로고
    • Segmental specialization of a leech swim-initiating interneuron, cell 2051
    • Weeks J C 1982 Segmental specialization of a leech swim-initiating interneuron, cell 2051 J. Neurosci. 2 972-85
    • (1982) J. Neurosci. , vol.2 , pp. 972-985
    • Weeks, J.C.1
  • 7
    • 0028822933 scopus 로고
    • How bacteria sense and swim
    • 10.1146/annurev.mi.49.100195.002421 0066-4227
    • Blair D F 1995 How bacteria sense and swim Annu. Rev. Microbiol. 49 489-520
    • (1995) Annu. Rev. Microbiol. , vol.49 , Issue.1 , pp. 489-520
    • Blair, D.F.1
  • 8
    • 10044252242 scopus 로고    scopus 로고
    • Making sense of it all: Bacterial chemotaxis
    • 10.1038/nrm1524 1471-0072
    • Wadhams G H and Armitage J P 2004 Making sense of it all: bacterial chemotaxis Nature Rev. Mol. Cell Biol. 5 1024-37
    • (2004) Nature Rev. Mol. Cell Biol. , vol.5 , Issue.12 , pp. 1024-1037
    • Wadhams, G.H.1    Armitage, J.P.2
  • 9
    • 0034770056 scopus 로고    scopus 로고
    • Quorum sensing in bacteria
    • 10.1146/annurev.micro.55.1.165 0066-4227
    • Miller M B and Bassler B L 2001 Quorum sensing in bacteria Annu. Rev. Microbiol. 55 165-99
    • (2001) Annu. Rev. Microbiol. , vol.55 , Issue.1 , pp. 165-199
    • Miller, M.B.1    Bassler, B.L.2
  • 10
    • 0032864725 scopus 로고    scopus 로고
    • A hierarchical quorum-sensing system in Yersinia pseudotuberculosis is involved in the regulation of motility and clumping
    • 10.1046/j.1365-2958.1999.01578.x 0950-382X
    • Atkinson S, Throup J P, Stewart G S and Williams P 1999 A hierarchical quorum-sensing system in Yersinia pseudotuberculosis is involved in the regulation of motility and clumping Mol. Microbiol. 33 1267-77
    • (1999) Mol. Microbiol. , vol.33 , Issue.6 , pp. 1267-1277
    • Atkinson, S.1    Throup, J.P.2    Stewart, G.S.3    Williams, P.4
  • 11
    • 0032692797 scopus 로고    scopus 로고
    • How bacteria talk to each other: Regulation of gene expression by quorum sensing
    • 10.1016/S1369-5274(99)00025-9 1369-5274
    • Bassler B L 1999 How bacteria talk to each other: regulation of gene expression by quorum sensing Curr. Opin. Microbiol. 2 582-7
    • (1999) Curr. Opin. Microbiol. , vol.2 , Issue.6 , pp. 582-587
    • Bassler, B.L.1
  • 12
    • 80054124775 scopus 로고    scopus 로고
    • Sequential establishment of stripe patterns in an expanding cell population
    • 10.1126/science.1209042 0036-8075
    • Liu C et al 2011 Sequential establishment of stripe patterns in an expanding cell population Science 334 238-41
    • (2011) Science , vol.334 , Issue.6053 , pp. 238-241
    • Liu, C.1
  • 13
    • 76549110816 scopus 로고    scopus 로고
    • Bacterial strategies for chemotaxis response
    • 10.1073/pnas.0909673107 0027-8424
    • Celani A and Vergassola M 2010 Bacterial strategies for chemotaxis response Proc. Natl Acad. Sci. USA 107 1391-6
    • (2010) Proc. Natl Acad. Sci. USA , vol.107 , Issue.4 , pp. 1391-1396
    • Celani, A.1    Vergassola, M.2
  • 14
    • 52649087801 scopus 로고    scopus 로고
    • Function of a chemotaxis-like signal transduction pathway in modulating motility, cell clumping, and cell length in the alphaproteobacterium Azospirillum brasilense
    • 10.1128/JB.00734-08 0021-9193
    • Bible A N, Stephens B B, Ortega D R, Xie Z and Alexandre G 2008 Function of a chemotaxis-like signal transduction pathway in modulating motility, cell clumping, and cell length in the alphaproteobacterium Azospirillum brasilense J. Bacteriol. 190 6365-75
    • (2008) J. Bacteriol. , vol.190 , Issue.19 , pp. 6365-6375
    • Bible, A.N.1    Stephens, B.B.2    Ortega, D.R.3    Xie, Z.4    Alexandre, G.5
  • 15
    • 80052901173 scopus 로고    scopus 로고
    • The chemotaxis-like Che1 pathway has an indirect role in adhesive cell properties of Azospirillum brasilense
    • 10.1111/j.1574-6968.2011.02366.x 0378-1097
    • Siuti P, Green C, Edwards A N, Doktycz M J and Alexandre G 2011 The chemotaxis-like Che1 pathway has an indirect role in adhesive cell properties of Azospirillum brasilense FEMS Microbiol. Lett. 323 105-12
    • (2011) FEMS Microbiol. Lett. , vol.323 , Issue.2 , pp. 105-112
    • Siuti, P.1    Green, C.2    Edwards, A.N.3    Doktycz, M.J.4    Alexandre, G.5
  • 16
    • 0031825203 scopus 로고    scopus 로고
    • Aggregation in Azospirillum brasilense: Effects of chemical and physical and involvement of extracellular components
    • 10.1099/00221287-144-7-1989 1350-0872
    • Burdman S, Jurkevitch E, Schwartsburd B, Hampel M and Okon Y 1998 Aggregation in Azospirillum brasilense: effects of chemical and physical and involvement of extracellular components Microbiology 144 1989-99
    • (1998) Microbiology , vol.144 , Issue.7 , pp. 1989-1999
    • Burdman, S.1    Jurkevitch, E.2    Schwartsburd, B.3    Hampel, M.4    Okon, Y.5
  • 17
    • 0026331470 scopus 로고
    • Behaviour of Azospirillum brasilense in a spatial gradient of oxygen and in a 'redox' gradient of an artificial electron acceptor
    • 10.1099/00221287-137-12-2781 0022-1287
    • Grishanin R N, Chalmina I I and Zhulin I B 1991 Behaviour of Azospirillum brasilense in a spatial gradient of oxygen and in a 'redox' gradient of an artificial electron acceptor J. Gen. Microbiol. 137 2781-5
    • (1991) J. Gen. Microbiol. , vol.137 , Issue.12 , pp. 2781-2785
    • Grishanin, R.N.1    Chalmina, I.I.2    Zhulin, I.B.3
  • 18
    • 0033936201 scopus 로고    scopus 로고
    • Surface characteristics of Azospirillum brasilense in relation to cell aggregation and attachment to plant roots
    • 10.1080/10408410091154200 1040-841X
    • Burdman S, Okon Y and Jurkevitch E 2000 Surface characteristics of Azospirillum brasilense in relation to cell aggregation and attachment to plant roots Crit. Rev. Microbiol. 26 91-100
    • (2000) Crit. Rev. Microbiol. , vol.26 , Issue.2 , pp. 91-100
    • Burdman, S.1    Okon, Y.2    Jurkevitch, E.3
  • 19
    • 70149122145 scopus 로고    scopus 로고
    • Helicobacter pylori moves through mucus by reducing mucin viscoelasticity
    • 10.1073/pnas.0903438106 0027-8424
    • Celli J P et al 2009 Helicobacter pylori moves through mucus by reducing mucin viscoelasticity Proc. Natl Acad. Sci. USA 106 14321-6
    • (2009) Proc. Natl Acad. Sci. USA , vol.106 , Issue.34 , pp. 14321-14326
    • Celli, J.P.1
  • 20
    • 77953438996 scopus 로고    scopus 로고
    • Modelling bacterial behaviour close to a no-slip plane boundary: The influence of bacterial geometry
    • 10.1098/rspa.2009.0520 1364-5021 A
    • Shum H, Gaffney E A and Smith D J 2010 Modelling bacterial behaviour close to a no-slip plane boundary: the influence of bacterial geometry Proc. R. Soc. A 466 1725-48
    • (2010) Proc. R. Soc. , vol.466 , Issue.2118 , pp. 1725-1748
    • Shum, H.1    Gaffney, E.A.2    Smith, D.J.3
  • 21
    • 76249126819 scopus 로고    scopus 로고
    • Conformational spread as a mechanism for cooperativity in the bacterial flagellar switch
    • 10.1126/science.1182105 0036-8075
    • Bai F, Branch R W, Nicolau D V Jr, Pilizota T, Steel B C, Maini P K and Berry R M 2010 Conformational spread as a mechanism for cooperativity in the bacterial flagellar switch Science 327 685-9
    • (2010) Science , vol.327 , Issue.5966 , pp. 685-689
    • Bai, F.1    Branch, R.W.2    Nicolau Jr., D.V.3    Pilizota, T.4    Steel, B.C.5    Maini, P.K.6    Berry, R.M.7
  • 22
    • 0001730998 scopus 로고
    • Novel type of phase transition in a system of self-driven particles
    • 10.1103/PhysRevLett.75.1226 0031-9007
    • Vicsek T, Czirok A, Eshel B, Cohen I and Shochet O 1995 Novel type of phase transition in a system of self-driven particles Phys. Rev. Lett. 75 1226-9
    • (1995) Phys. Rev. Lett. , vol.75 , Issue.6 , pp. 1226-1229
    • Vicsek, T.1    Czirok, A.2    Eshel, B.3    Cohen, I.4    Shochet, O.5
  • 23
    • 77950857095 scopus 로고    scopus 로고
    • Hierarchical group dynamics in pigeon flocks
    • 10.1038/nature08891 0028-0836
    • Nagy M, Akos Z, Biro D and Vicsek T 2010 Hierarchical group dynamics in pigeon flocks Nature 464 890-3
    • (2010) Nature , vol.464 , Issue.7290 , pp. 890-893
    • Nagy, M.1    Akos, Z.2    Biro, D.3    Vicsek, T.4
  • 26
    • 0034612523 scopus 로고    scopus 로고
    • Inspiration for optimization from social insect behaviour
    • 10.1038/35017500 0028-0836
    • Bonabean E, Dorigo M and Theraulaz G 2000 Inspiration for optimization from social insect behaviour Nature 406 39-42
    • (2000) Nature , vol.406 , Issue.6791 , pp. 39-42
    • Bonabean, E.1    Dorigo, M.2    Theraulaz, G.3
  • 27
    • 79551513795 scopus 로고    scopus 로고
    • Collective hydrodynamics of swimming microorganisms: Living fluids
    • 10.1146/annurev-fluid-121108-145434 0066-4189
    • Koch D L and Subramanian G 2011 Collective hydrodynamics of swimming microorganisms: living fluids Annu. Rev. Fluid Mech. 43 637-59
    • (2011) Annu. Rev. Fluid Mech. , vol.43 , Issue.1 , pp. 637-659
    • Koch, D.L.1    Subramanian, G.2
  • 28
    • 77957255790 scopus 로고    scopus 로고
    • Swarm behavior of self-propelled rods and swimming flagella
    • 10.1103/PhysRevE.82.031904 1539-3755 E 031904
    • Yang Y, Marceau V and Gompper G 2010 Swarm behavior of self-propelled rods and swimming flagella Phys. Rev. E 82 031904
    • (2010) Phys. Rev. , vol.82 , Issue.3
    • Yang, Y.1    Marceau, V.2    Gompper, G.3
  • 29
    • 79958765970 scopus 로고    scopus 로고
    • Collective motion from local attraction
    • 10.1016/j.jtbi.2011.05.019 0022-5193
    • Strombom D 2011 Collective motion from local attraction J. Theor. Biol. 283 145-51
    • (2011) J. Theor. Biol. , vol.283 , Issue.1 , pp. 145-151
    • Strombom, D.1
  • 30
    • 79960821580 scopus 로고    scopus 로고
    • Adaptive-network models of swarm dynamics
    • 1367-2630 073022
    • Huepe C, Zschaler G, Do A L and Gross T 2011 Adaptive-network models of swarm dynamics New J. Phys. 13 073022
    • (2011) New J. Phys. , vol.13 , Issue.7
    • Huepe, C.1    Zschaler, G.2    Do, A.L.3    Gross, T.4
  • 32
    • 77956377721 scopus 로고    scopus 로고
    • Collective motion and density fluctuations in bacterial colonies
    • 10.1073/pnas.1001651107 0027-8424
    • Zhang H P, Be'er A, Florin E L and Swinney H L 2010 Collective motion and density fluctuations in bacterial colonies Proc. Natl Acad. Sci. USA 107 13626-30
    • (2010) Proc. Natl Acad. Sci. USA , vol.107 , Issue.31 , pp. 13626-13630
    • Zhang, H.P.1    Be'Er, A.2    Florin, E.L.3    Swinney, H.L.4
  • 33
    • 80052680647 scopus 로고    scopus 로고
    • Self-organization in bacterial swarming: Lessons from myxobacteria
    • 1478-3975 055003
    • Wu Y, Jiang Y, Kaiser A D and Alber M 2011 Self-organization in bacterial swarming: lessons from myxobacteria Phys. Biol. 8 055003
    • (2011) Phys. Biol. , vol.8 , Issue.5
    • Wu, Y.1    Jiang, Y.2    Kaiser, A.D.3    Alber, M.4
  • 34
    • 66749083981 scopus 로고    scopus 로고
    • Signals, regulatory networks, and materials that build and break bacterial biofilms
    • 10.1128/MMBR.00041-08 1092-2172
    • Karatan E and Watnick P 2009 Signals, regulatory networks, and materials that build and break bacterial biofilms Microbiol. Mol. Biol. Rev. 73 310-47
    • (2009) Microbiol. Mol. Biol. Rev. , vol.73 , Issue.2 , pp. 310-347
    • Karatan, E.1    Watnick, P.2
  • 35
    • 0036731699 scopus 로고    scopus 로고
    • Listening in on bacteria: Acyl-homoserine lactone signaling
    • 10.1038/nrm907 1471-0072
    • Fuqua C and Greenberg E P 2002 Listening in on bacteria: acyl-homoserine lactone signaling Nature Rev. Mol. Cell Biol. 3 685-95
    • (2002) Nature Rev. Mol. Cell Biol. , vol.3 , Issue.9 , pp. 685-695
    • Fuqua, C.1    Greenberg, E.P.2
  • 36
    • 33644945189 scopus 로고    scopus 로고
    • Bacterial motility: Links to the environment and a driving force for microbial physics
    • 10.1111/j.1574-6941.2005.00003.x 0168-6496
    • Mitchell J G and Kogure K 2006 Bacterial motility: links to the environment and a driving force for microbial physics FEMS Microbiol. Ecol. 55 3-16
    • (2006) FEMS Microbiol. Ecol. , vol.55 , Issue.1 , pp. 3-16
    • Mitchell, J.G.1    Kogure, K.2
  • 38
    • 84864003543 scopus 로고    scopus 로고
    • The Azospirillum brasilense Che1 chemotaxis pathway controls the swimming speed which affects transient cell-to-cell clumping
    • 10.1128/JB.00310-12 0021-9193
    • Bible A, Russell M H and Alexandre G 2012 The Azospirillum brasilense Che1 chemotaxis pathway controls the swimming speed which affects transient cell-to-cell clumping J. Bacteriol. 194 3343-55
    • (2012) J. Bacteriol. , vol.194 , Issue.13 , pp. 3343-3355
    • Bible, A.1    Russell, M.H.2    Alexandre, G.3
  • 40
    • 33750652614 scopus 로고
    • Brownian dynamics with hydrodynamic interactions
    • 10.1063/1.436761 0021-9606
    • Ermak D and McCammon J 1978 Brownian dynamics with hydrodynamic interactions J. Chem. Phys. 69 1352-60
    • (1978) J. Chem. Phys. , vol.69 , Issue.4 , pp. 1352-1360
    • Ermak, D.1    McCammon, J.2
  • 41
    • 36549102274 scopus 로고
    • Brownian dynamics simulation of diffusion-influenced bimolecular reactions
    • 10.1063/1.446900 0021-9606
    • Northrup S H, Allison S A and McCammon J A 1984 Brownian dynamics simulation of diffusion-influenced bimolecular reactions J. Chem. Phys. 80 1517-24
    • (1984) J. Chem. Phys. , vol.80 , Issue.4 , pp. 1517-1524
    • Northrup, S.H.1    Allison, S.A.2    McCammon, J.A.3
  • 42
    • 33744940504 scopus 로고    scopus 로고
    • Gated binding of ligands to HIV-1 protease: Brownian dynamics simulations in a coarse-grained model
    • 10.1529/biophysj.105.074575 0006-3495
    • Chang C E, Shen T, Trylska J, Tozzini V and McCammon J A 2006 Gated binding of ligands to HIV-1 protease: Brownian dynamics simulations in a coarse-grained model Biophys. J. 90 3880-5
    • (2006) Biophys. J. , vol.90 , Issue.11 , pp. 3880-3885
    • Chang, C.E.1    Shen, T.2    Trylska, J.3    Tozzini, V.4    McCammon, J.A.5
  • 43
    • 0000051417 scopus 로고
    • Effect of hydrodynamic interactions on the distribution of adhering Brownian particles
    • 10.1103/PhysRevLett.70.623 0031-9007
    • Bafaluy J, Senger B, Voegel J C and Schaaf P 1993 Effect of hydrodynamic interactions on the distribution of adhering Brownian particles Phys. Rev. Lett 70 623-6
    • (1993) Phys. Rev. Lett , vol.70 , Issue.5 , pp. 623-626
    • Bafaluy, J.1    Senger, B.2    Voegel, J.C.3    Schaaf, P.4
  • 44
    • 77952375163 scopus 로고    scopus 로고
    • Exploring the discrepancies between experiment, theory, and simulation for the homogeneous gas-to-liquid nucleation of 1-pentanol
    • 10.1063/1.3368116 0021-9606 164517
    • Nellas R B, Keasler S J, Siepmann J I and Chen B 2010 Exploring the discrepancies between experiment, theory, and simulation for the homogeneous gas-to-liquid nucleation of 1-pentanol J. Chem. Phys. 132 164517
    • (2010) J. Chem. Phys. , vol.132 , Issue.16
    • Nellas, R.B.1    Keasler, S.J.2    Siepmann, J.I.3    Chen, B.4
  • 45
    • 33244484857 scopus 로고    scopus 로고
    • Nonequilibrium statistical mechanical models for cytoskeletal assembly: Towards understanding tensegrity in cells
    • 10.1103/PhysRevE.72.041927 1539-3755 E 041927
    • Shen T and Wolynes P G 2005 Nonequilibrium statistical mechanical models for cytoskeletal assembly: towards understanding tensegrity in cells Phys. Rev. E 72 041927
    • (2005) Phys. Rev. , vol.72 , Issue.4
    • Shen, T.1    Wolynes, P.G.2
  • 46
    • 0141569059 scopus 로고    scopus 로고
    • Remodeling of the airway smooth muscle cell: Are we built of glass?
    • 10.1016/S1569-9048(03)00141-1 1569-9048
    • Fabry B and Fredberg J J 2003 Remodeling of the airway smooth muscle cell: are we built of glass? Respir. Physiol. Neurobiol. 137 109-24
    • (2003) Respir. Physiol. Neurobiol. , vol.137 , Issue.2-3 , pp. 109-124
    • Fabry, B.1    Fredberg, J.J.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.