New constitutive vectors: Useful genetic engineering tools for biocatalysis

Applied and Environmental Microbiology

Volumn 79, Issue 8, 2013, Pages 2836-2840

  Xu, Youqiang ^a   Tao, Fei ^b   Ma, Cuiqing ^a   Xu, Ping ^a,b  

^a SHANDONG UNIVERSITY   (China)

^b Shanghai Jiao Tong University   (China)

Author keywords

[No Author keywords available]

Indexed keywords

BIOCATALYSIS; GENETIC TOOLS;

GENETIC ENGINEERING;

VECTORS;

CATALYSIS; COMPARATIVE STUDY; DISEASE VECTOR; GENE EXPRESSION; GENETIC ENGINEERING; HOST USE;

ARTICLE; BIOCATALYSIS; GENE EXPRESSION REGULATION; GENE VECTOR; GENETIC ENGINEERING; GENETICS; METABOLISM; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PROMOTER REGION; PSEUDOMONAS;

BIOCATALYSIS; GENE EXPRESSION REGULATION, BACTERIAL; GENETIC ENGINEERING; GENETIC VECTORS; MOLECULAR SEQUENCE DATA; PROMOTER REGIONS, GENETIC; PSEUDOMONAS;

PSEUDOMONAS;

EID: 84876206509     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.03746-12     Document Type: Article

References (36)

1. Di Gennaro P, Ferrara S, Bestetti G, Sello G, Solera D, Galli E, Renzi F, Bertoni G. 2008. Novel auto-inducing expression systems for the development of whole-cell biocatalysts. Appl. Microbiol. Biotechnol. 79:617-625.
2. Keasling JD. 2012. Synthetic biology and the development of tools for metabolic engineering. Metab. Eng. 14:189 -195.
3. Lale R, Brautaset T, Valla S. 2011. Broad-host-range plasmid vectors for gene expression in bacteria. Methods Mol. Biol. 765:327-343.
4. Schweizer HP. 2001. Vectors to express foreign genes and techniques to monitor gene expression in Pseudomonads. Curr. Opin. Biotechnol. 12: 439-445.
5. Tao F, Liu Y, Luo Q, Su F, Xu Y, Li F, Yu B, Ma C, Xu P. 2011. Novel organic solvent-responsive expression vectors for biocatalysis: application for development of an organic solvent-tolerant biodesulfurizing strain. Bioresour. Technol. 102:9380 -9387.
6. Hayes F. 2003. The function and organization of plasmids. Methods Mol. Biol. 235:1-17.
7. Palomares LA, Estrada-Mondaca S, Ramírez OT. 2004. Production of recombinant proteins: challenges and solutions. Methods Mol. Biol. 267: 15-52.
8. Poo H, Song JJ, Hong S, Choi Y, Yun SW, Kim J, Lee SC, Lee S, Sung MH. 2002. Novel high-level constitutive expression system, pHCE vector, for a convenient and cost-effective soluble production of human tumor necrosis factor-α. Biotechnol. Lett. 24:1185-1189.
9. Donovan RS, Robinson CW, Glick BR. 1996. Review: optimizing inducer and culture conditions for expression of foreign proteins under the control of the lac promoter. J. Ind. Microbiol. 16:145-154.
10. Jensen PR, Hammer K. 1998. The sequence of spacers between the consensus sequences modulates the strength of prokaryotic promoters. Appl. Environ. Microbiol. 64:82- 87.
11. Jeong KJ, Choi JH, Yoo WM, Keum KC, Yoo NC, Lee SY, Sung MH. 2004. Constitutive production of human leptin by fed-batch culture of recombinant rpoS-Escherichia coli. Protein Expr. Purif. 36:150 -156.
12. Santos CN, Stephanopoulos G. 2008. Combinatorial engineering of microbes for optimizing cellular phenotype. Curr. Opin. Chem. Biol. 12: 168-176.
13. Xu H, Davies J, Miao V. 2007. Molecular characterization of class 3 integrons from Delftia spp. J. Bacteriol. 189:6276-6283.
14. Sundström L. 1998. The potential of integrons and connected programmed rearrangements for mediating horizontal gene transfer. APMIS Suppl. 84:37- 42.
15. Lévesque C, Brassard S, Lapointe J, Roy PH. 1994. Diversity and relative strength of tandem promoters for the antibiotic-resistance genes of several integrons. Gene 142:49 -54.
16. Fürste JP, Pansegrau W, Frank R, Blöcker H, Scholz P, Bagdasarian M, Lanka E. 1986. Molecular cloning of the plasmid RP4 primase region in a multi-host-range tacP expression vector. Gene 48:119 -131.
17. Li Q, Wang X, Yin G, Gai Z, Tang H, Ma C, Deng Z, Xu P. 2009. New metabolites in dibenzofuran cometabolic degradation by a biphenylcultivated Pseudomonas putida strain B6-2. Environ. Sci. Technol. 43: 8635-8642.
18. Asturias JA, Timmis KN. 1993. Three different 2,3-dihydroxybiphenyl-1,2-dioxygenase genes in the gram-positive polychlorobiphenyldegrading bacterium Rhodococcus globerulus P6. J. Bacteriol. 175:4631-4640.
19. Artiguenave F, Vilaginès R, Danglot C. 1997. High-efficiency transposon mutagenesis by electroporation of a Pseudomonas fluorescens strain. FEMS Microbiol. Lett. 153:363-369.
20. Cho JH, Kim EK, So JS. 1995. Improved transformation of Pseudomonas putida KT2440 by electroporation. Biotechnol. Tech. 9:41- 44.
21. Deziel E, Paquette G, Villemur R, Lepine F, Bisaillon J. 1996. Biosurfactant production by a soil Pseudomonas strain growing on polycyclic aromatic hydrocarbons. Appl. Environ. Microbiol. 62:1908 -1912.
22. Gao C, Jiang T, Dou P, Ma C, Li L, Kong J, Xu P. 2012. NADindependent l-lactate dehydrogenase is required for L-lactate utilization in Pseudomonas stutzeri SDM. PLoS One 7:e36519. doi:10.1371/journal.pone.0036519.
23. Timmis KN. 2002. Pseudomonas putida: a cosmopolitan opportunist par excellence. Environ. Microbiol. 4:779 -781.
24. Wackett LP. 2003. Pseudomonas putida-a versatile biocatalyst. Nat. Biotechnol. 21:136 -138.
25. de Boer HA, Comstock LJ, Vasser M. 1983. The tac promoter: a functional hybrid derived from the trp and lac promoters. Proc. Natl. Acad. Sci. U. S. A. 80:21-25.
26. Klatte M, Bauer P. 2009. Accurate real-time reverse transcription quantitative PCR. Methods Mol. Biol. 479:61-77.
27. Nieto PA, Covarrubias PC, Jedlicki E, Holmes DS, Quatrini R. 2009. Selection and evaluation of reference genes for improved interrogation of microbial transcriptomes: case study with the extremophile Acidithiobacillus ferrooxidans. BMC Mol. Biol. 10:63.
28. Smith CJ, Osborn AM. 2009. Advantages and limitations of quantitative PCR (Q-PCR)-based approaches in microbial ecology. FEMS Microbiol. Ecol. 67:6 -20.
29. Olsen RH, DeBusscher G, McCombie WR. 1982. Development of broadhost- range vectors and gene banks: self-cloning of the Pseudomonas aeruginosa PAO chromosome. J. Bacteriol. 150:60-69.
30. Scholz P, Haring V, Wittmann-Liebold B, Ashman K, Bagdasarian M, Scherzinger E. 1989. Complete nucleotide sequence and gene organization of the broad-host-range plasmid RSF1010. Gene 75:271-288.
31. Choi KH, Gaynor JB, White KG, Lopez C, Bosio CM, Karkhoff-Schweizer RR, Schweizer HP. 2005. A Tn7-based broad-range bacterial cloning and expression system. Nat. Methods 2:443- 448.
32. Lee TS, Krupa RA, Zhang F, Hajimorad M, Holtz WJ, Prasad N, Lee SK, Keasling JD. 2011. BglBrick vectors and datasheets: a synthetic biology platform for gene expression. J. Biol. Eng. 5:12.
33. Qin JY, Zhang L, Clift KL, Hulur I, Xiang AP, Ren BZ, Lahn BT. 2010. Systematic comparison of constitutive promoters and the doxycyclineinducible promoter. PLoS One 5:e10611. doi:10.1371/journal.pone.0010611.
34. Tao F, Yu B, Xu P, Ma C. 2006. Biodesulfurization in biphasic systems containing organic solvents. Appl. Environ. Microbiol. 72:4604-4609.
35. Xu Y, Wang A, Tao F, Su F, Tang H, Ma C, Xu P. 2012. Genome sequence of Enterobacter cloacae subsp. dissolvens SDM, an efficient biomass- utilizing producer of platform chemical 2,3-butanediol. J. Bacteriol. 194:897- 898.
36. Zeng AP, Sabra W. 2011. Microbial production of diols as platform chemicals: recent progresses. Curr. Opin. Biotechnol. 22:749 -757.