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Volumn 195, Issue 8, 2013, Pages 1758-1768

Interplay between type 1A topoisomerases and Gyrase in chromosome segregation in Escherichia coli

Author keywords

[No Author keywords available]

Indexed keywords

DNA TOPOISOMERASE; DNA TOPOISOMERASE (ATP HYDROLYSING) B; GYRASE INHIBITOR; TOPOISOMERASE A; TOPOISOMERASE B; UNCLASSIFIED DRUG;

EID: 84876091631     PISSN: 00219193     EISSN: 10985530     Source Type: Journal    
DOI: 10.1128/JB.02001-12     Document Type: Article
Times cited : (21)

References (49)
  • 1
    • 0034923502 scopus 로고    scopus 로고
    • DNA topoisomerases: structure, function, and mechanism
    • Champoux JJ. 2001. DNA topoisomerases: structure, function, and mechanism. Annu. Rev. Biochem. 70:369-413.
    • (2001) Annu. Rev. Biochem. , vol.70 , pp. 369-413
    • Champoux, J.J.1
  • 2
    • 0021930945 scopus 로고
    • Bacterial DNA topoisomerase I can relax positively supercoiled DNA containing a single-stranded loop
    • Kirkegaard K, Wang JC. 1985. Bacterial DNA topoisomerase I can relax positively supercoiled DNA containing a single-stranded loop. J. Mol. Biol. 185:625-637.
    • (1985) J. Mol. Biol. , vol.185 , pp. 625-637
    • Kirkegaard, K.1    Wang, J.C.2
  • 3
    • 0026555506 scopus 로고
    • Control of bacterial DNA supercoiling
    • Drlica K. 1992. Control of bacterial DNA supercoiling. Mol. Microbiol. 6:425-433.
    • (1992) Mol. Microbiol. , vol.6 , pp. 425-433
    • Drlica, K.1
  • 4
    • 0033523016 scopus 로고    scopus 로고
    • Relaxation of transcription-induced negative supercoiling is an essential function of Escherichia coli DNA topoisomerase I
    • Massé E, Drolet M. 1999. Relaxation of transcription-induced negative supercoiling is an essential function of Escherichia coli DNA topoisomerase I. J. Biol. Chem. 274:16654-16658.
    • (1999) J. Biol. Chem. , vol.274 , pp. 16654-16658
    • Massé, E.1    Drolet, M.2
  • 5
    • 33645052194 scopus 로고    scopus 로고
    • Growth inhibition mediated by excess negative supercoiling: the interplay between transcription elongation, R-loop formation and DNA topology
    • Drolet M. 2006. Growth inhibition mediated by excess negative supercoiling: the interplay between transcription elongation, R-loop formation and DNA topology. Mol. Microbiol. 59:723-730.
    • (2006) Mol. Microbiol. , vol.59 , pp. 723-730
    • Drolet, M.1
  • 6
    • 0020426677 scopus 로고
    • Escherichia coli DNA topoisomerase I mutants have compensatory mutations in DNA gyrase genes
    • DiNardo S, Voelkel KA, Sternglanz R, Reynolds AE, Wright A. 1982. Escherichia coli DNA topoisomerase I mutants have compensatory mutations in DNA gyrase genes. Cell 31:43-51.
    • (1982) Cell , vol.31 , pp. 43-51
    • DiNardo, S.1    Voelkel, K.A.2    Sternglanz, R.3    Reynolds, A.E.4    Wright, A.5
  • 7
    • 0020426111 scopus 로고
    • Escherichia coli DNA topoisomerase I mutants: increased supercoiling is corrected by mutations near gyrase genes
    • Pruss GJ, Manes SH, Drlica K. 1982. Escherichia coli DNA topoisomerase I mutants: increased supercoiling is corrected by mutations near gyrase genes. Cell 31:35-42.
    • (1982) Cell , vol.31 , pp. 35-42
    • Pruss, G.J.1    Manes, S.H.2    Drlica, K.3
  • 8
    • 0033522905 scopus 로고    scopus 로고
    • Escherichia coli DNA topoisomerase I inhibits R-loop formation by relaxing transcription-induced negative supercoiling
    • Massé E, Drolet M. 1999. Escherichia coli DNA topoisomerase I inhibits R-loop formation by relaxing transcription-induced negative supercoiling. J. Biol. Chem. 274:16659-16664.
    • (1999) J. Biol. Chem. , vol.274 , pp. 16659-16664
    • Massé, E.1    Drolet, M.2
  • 10
    • 0024441516 scopus 로고
    • Molecular cloning and DNA sequence analysis of Escherichia coli topB, the gene encoding topoisomerase III
    • DiGate RJ, Marians KJ. 1989. Molecular cloning and DNA sequence analysis of Escherichia coli topB, the gene encoding topoisomerase III. J. Biol. Chem. 264:17924-17930.
    • (1989) J. Biol. Chem. , vol.264 , pp. 17924-17930
    • DiGate, R.J.1    Marians, K.J.2
  • 11
    • 0023712287 scopus 로고
    • Identification of a potent decatenating enzyme from Escherichia coli
    • DiGate RJ, Marians KJ. 1988. Identification of a potent decatenating enzyme from Escherichia coli. J. Biol. Chem. 263:13366-13373.
    • (1988) J. Biol. Chem. , vol.263 , pp. 13366-13373
    • DiGate, R.J.1    Marians, K.J.2
  • 14
    • 0023014127 scopus 로고
    • Complete enzymatic replication of plasmids containing the origin of the Escherichia coli chromosome
    • Funnell BE, Baker TA, Kornberg A. 1986. Complete enzymatic replication of plasmids containing the origin of the Escherichia coli chromosome. J. Biol. Chem. 261:5616-5624.
    • (1986) J. Biol. Chem. , vol.261 , pp. 5616-5624
    • Funnell, B.E.1    Baker, T.A.2    Kornberg, A.3
  • 15
    • 0031407768 scopus 로고    scopus 로고
    • DNA gyrase, topoisomerase IV, and the 4-quinolones
    • Drlica K, Zhao X. 1997. DNA gyrase, topoisomerase IV, and the 4-quinolones. Microbiol. Mol. Biol. Rev. 61:377-392.
    • (1997) Microbiol. Mol. Biol. Rev. , vol.61 , pp. 377-392
    • Drlica, K.1    Zhao, X.2
  • 16
    • 51149119105 scopus 로고    scopus 로고
    • Modulation of Escherichia coli sister chromosome cohesion by topoisomerase IV
    • Wang X, Reyes-Lamothe R, Sherratt DJ. 2008. Modulation of Escherichia coli sister chromosome cohesion by topoisomerase IV. Genes Dev. 22: 2426-2433.
    • (2008) Genes Dev. , vol.22 , pp. 2426-2433
    • Wang, X.1    Reyes-Lamothe, R.2    Sherratt, D.J.3
  • 18
    • 0029831664 scopus 로고    scopus 로고
    • Two distinct modes of strand unlinking during theta-type DNA replication
    • Hiasa H, Marians KJ. 1996. Two distinct modes of strand unlinking during theta-type DNA replication. J. Biol. Chem. 271:21529-21535.
    • (1996) J. Biol. Chem. , vol.271 , pp. 21529-21535
    • Hiasa, H.1    Marians, K.J.2
  • 19
    • 0001436335 scopus 로고
    • Unlinking of DNA by topoisomerases during DNA replication, p 115-142
    • Lilley DMJ, Eckstein F (ed), Springer-Verlag, Berlin, Germany
    • Ullsperger CJ, Vologodskii AA, Cozzarelli NR. 1995. Unlinking of DNA by topoisomerases during DNA replication, p 115-142. In Lilley DMJ, Eckstein F (ed), Nucleic acids and molecular biology. Springer-Verlag, Berlin, Germany.
    • (1995) Nucleic acids and molecular biology
    • Ullsperger, C.J.1    Vologodskii, A.A.2    Cozzarelli, N.R.3
  • 20
    • 0028589156 scopus 로고
    • Topoisomerase III, but not topoisomerase I, can support nascent chain elongation during theta-type DNA replication
    • Hiasa H, Marians KJ. 1994. Topoisomerase III, but not topoisomerase I, can support nascent chain elongation during theta-type DNA replication. J. Biol. Chem. 269:32655-32659.
    • (1994) J. Biol. Chem. , vol.269 , pp. 32655-32659
    • Hiasa, H.1    Marians, K.J.2
  • 21
    • 0027976667 scopus 로고
    • Decatenating activity of Escherichia coli DNA gyrase and topoisomerases I and III during oriC and pBR322 DNA replication in vitro
    • Hiasa H, DiGate RJ, Marians KJ. 1994. Decatenating activity of Escherichia coli DNA gyrase and topoisomerases I and III during oriC and pBR322 DNA replication in vitro. J. Biol. Chem. 269:2093-2099.
    • (1994) J. Biol. Chem. , vol.269 , pp. 2093-2099
    • Hiasa, H.1    DiGate, R.J.2    Marians, K.J.3
  • 22
    • 0037424533 scopus 로고    scopus 로고
    • Topoisomerase III can serve as the cellular decatenase in Escherichia coli
    • Nurse P, Levine C, Hassing H, Marians KJ. 2003. Topoisomerase III can serve as the cellular decatenase in Escherichia coli. J. Biol. Chem. 278:8653-8660.
    • (2003) J. Biol. Chem. , vol.278 , pp. 8653-8660
    • Nurse, P.1    Levine, C.2    Hassing, H.3    Marians, K.J.4
  • 23
    • 0024389431 scopus 로고
    • Escherichia coli parA is an allele of the gyrB gene
    • Kato J, Nishimura Y, Suzuki H. 1989. Escherichia coli parA is an allele of the gyrB gene. Mol. Gen. Genet. 217:178-181.
    • (1989) Mol. Gen. Genet. , vol.217 , pp. 178-181
    • Kato, J.1    Nishimura, Y.2    Suzuki, H.3
  • 24
    • 0026712869 scopus 로고
    • The role of topoisomerase IV in partitioning bacterial replicons and the structure of catenated intermediates in DNA replication
    • Adams DE, Shekhtman EM, Zechiedrich EL, Schmid MB, Cozzarelli NR. 1992. The role of topoisomerase IV in partitioning bacterial replicons and the structure of catenated intermediates in DNA replication. Cell 71:277-288.
    • (1992) Cell , vol.71 , pp. 277-288
    • Adams, D.E.1    Shekhtman, E.M.2    Zechiedrich, E.L.3    Schmid, M.B.4    Cozzarelli, N.R.5
  • 25
    • 0027171678 scopus 로고
    • Decatenation activity of topoisomerase IV during oriC and pBR322 DNA replication in vitro
    • Peng H, Marians KJ. 1993. Decatenation activity of topoisomerase IV during oriC and pBR322 DNA replication in vitro. Proc. Natl. Acad. Sci. U. S. A. 90:8571-8575.
    • (1993) Proc. Natl. Acad. Sci. U. S. A. , vol.90 , pp. 8571-8575
    • Peng, H.1    Marians, K.J.2
  • 26
    • 0029856729 scopus 로고    scopus 로고
    • Contrasting enzymatic activities of topoisomerase IV and DNA gyrase from Escherichia coli
    • Ullsperger C, Cozzarelli NR. 1996. Contrasting enzymatic activities of topoisomerase IV and DNA gyrase from Escherichia coli. J. Biol. Chem. 271:31549-31555.
    • (1996) J. Biol. Chem. , vol.271 , pp. 31549-31555
    • Ullsperger, C.1    Cozzarelli, N.R.2
  • 27
    • 0030771373 scopus 로고    scopus 로고
    • Topoisomerase IV, not gyrase, decatenates products of site-specific recombination in Escherichia coli
    • Zechiedrich EL, Khodursky AB, Cozzarelli NR. 1997. Topoisomerase IV, not gyrase, decatenates products of site-specific recombination in Escherichia coli. Genes Dev. 19:2580-2592.
    • (1997) Genes Dev. , vol.19 , pp. 2580-2592
    • Zechiedrich, E.L.1    Khodursky, A.B.2    Cozzarelli, N.R.3
  • 28
    • 0034652329 scopus 로고    scopus 로고
    • Closing the ring: links between SMC proteins and chromosome partitioning, condensation, and supercoiling
    • Holmes VF, Cozzarelli NR. 2000. Closing the ring: links between SMC proteins and chromosome partitioning, condensation, and supercoiling. Proc. Natl. Acad. Sci. U. S. A. 97:1322-1324.
    • (2000) Proc. Natl. Acad. Sci. U. S. A. , vol.97 , pp. 1322-1324
    • Holmes, V.F.1    Cozzarelli, N.R.2
  • 29
    • 77952301118 scopus 로고    scopus 로고
    • DNA supercoiling and its role in DNA decatenation and unknotting
    • Witz G, Stasiak A. 2010. DNA supercoiling and its role in DNA decatenation and unknotting. Nucleic Acids Res. 38:2119-2133.
    • (2010) Nucleic Acids Res. , vol.38 , pp. 2119-2133
    • Witz, G.1    Stasiak, A.2
  • 30
    • 0035859935 scopus 로고    scopus 로고
    • Type I topoisomerase activity is required for proper chromosomal segregation in Escherichia coli
    • Zhu Q, Pongpech P, DiGate RJ. 2001. Type I topoisomerase activity is required for proper chromosomal segregation in Escherichia coli. Proc. Natl. Acad. Sci. U. S. A. 98:9766-9771.
    • (2001) Proc. Natl. Acad. Sci. U. S. A. , vol.98 , pp. 9766-9771
    • Zhu, Q.1    Pongpech, P.2    DiGate, R.J.3
  • 31
    • 0028966185 scopus 로고
    • Overexpression of RNaseHpartially complements the growth defect of an Escherichia coli delta topA mutant: R-loop formation is a major problem in the absence of DNA topoisomerase I
    • Drolet M, Phoenix P, Menzel R, Massé E, Liu LF, Crouch RJ. 1995. Overexpression of RNaseHpartially complements the growth defect of an Escherichia coli delta topA mutant: R-loop formation is a major problem in the absence of DNA topoisomerase I. Proc. Natl. Acad. Sci. U. S. A. 92: 3526-3530.
    • (1995) Proc. Natl. Acad. Sci. U. S. A. , vol.92 , pp. 3526-3530
    • Drolet, M.1    Phoenix, P.2    Menzel, R.3    Massé, E.4    Liu, L.F.5    Crouch, R.J.6
  • 32
    • 47749130441 scopus 로고    scopus 로고
    • Depletion of RNase HI activity in Escherichia coli lacking DNA topoisomerase I leads to defects in DNA supercoiling and segregation
    • Usongo V, Nolent F, Sanscartier P, Tanguay C, Broccoli S, Baaklini I, Drlica K, Drolet M. 2008. Depletion of RNase HI activity in Escherichia coli lacking DNA topoisomerase I leads to defects in DNA supercoiling and segregation. Mol. Microbiol. 69:968-981.
    • (2008) Mol. Microbiol. , vol.69 , pp. 968-981
    • Usongo, V.1    Nolent, F.2    Sanscartier, P.3    Tanguay, C.4    Broccoli, S.5    Baaklini, I.6    Drlica, K.7    Drolet, M.8
  • 33
    • 0033958423 scopus 로고    scopus 로고
    • Isolation of the topB gene encoding DNA topoisomerase III as a multicopy suppressor of topA null mutations in Escherichia coli
    • Broccoli S, Phoenix P, Drolet M. 2000. Isolation of the topB gene encoding DNA topoisomerase III as a multicopy suppressor of topA null mutations in Escherichia coli. Mol. Microbiol. 35:58-68.
    • (2000) Mol. Microbiol. , vol.35 , pp. 58-68
    • Broccoli, S.1    Phoenix, P.2    Drolet, M.3
  • 34
    • 3042550193 scopus 로고    scopus 로고
    • Effects of RNA polymerase modifications on transcription-induced supercoiling and associated R-loop formation
    • Broccoli S, Rallu F, Sanscartier P, Cerritelli SM, Crouch RJ, Drolet M. 2004. Effects of RNA polymerase modifications on transcription-induced supercoiling and associated R-loop formation. Mol. Microbiol. 52:1769-1779.
    • (2004) Mol. Microbiol. , vol.52 , pp. 1769-1779
    • Broccoli, S.1    Rallu, F.2    Sanscartier, P.3    Cerritelli, S.M.4    Crouch, R.J.5    Drolet, M.6
  • 35
    • 0021233262 scopus 로고
    • Bacterial chromosome segregation: evidence for DNA gyrase involvement in decatenation
    • Steck TR, Drlica K. 1984. Bacterial chromosome segregation: evidence for DNA gyrase involvement in decatenation. Cell 36:1081-1088.
    • (1984) Cell , vol.36 , pp. 1081-1088
    • Steck, T.R.1    Drlica, K.2
  • 37
    • 0035943056 scopus 로고    scopus 로고
    • A ParE-ParC fusion protein is a functional topoisomerase
    • Lavasani LS, Hiasa H. 2001. A ParE-ParC fusion protein is a functional topoisomerase. Biochemistry 40:8438-8443.
    • (2001) Biochemistry , vol.40 , pp. 8438-8443
    • Lavasani, L.S.1    Hiasa, H.2
  • 38
    • 0019494571 scopus 로고
    • Essential role of the gyrB gene product in the transcriptional event coupled to dnaA-dependent initiation of Escherichia coli chromosome replication
    • Filutowicz M, Jonczyk P. 1981. Essential role of the gyrB gene product in the transcriptional event coupled to dnaA-dependent initiation of Escherichia coli chromosome replication. Mol. Gen. Genet. 183:134-138.
    • (1981) Mol. Gen. Genet. , vol.183 , pp. 134-138
    • Filutowicz, M.1    Jonczyk, P.2
  • 39
    • 0020512276 scopus 로고
    • The gyrB gene product functions in both initiation and chain polymerization of Escherichia coli chromosome replication: suppression of the initiation deficiency in gyrB-ts mutants by a class of rpoB mutations
    • Filutowicz M, Jonczyk P. 1983. The gyrB gene product functions in both initiation and chain polymerization of Escherichia coli chromosome replication: suppression of the initiation deficiency in gyrB-ts mutants by a class of rpoB mutations. Mol. Gen. Genet. 191:282-287.
    • (1983) Mol. Gen. Genet. , vol.191 , pp. 282-287
    • Filutowicz, M.1    Jonczyk, P.2
  • 40
    • 33644847122 scopus 로고    scopus 로고
    • Characterization of a unique type IA topoisomerase in Bacillus cereus
    • Li Z, Hiasa H, DiGate R. 2006. Characterization of a unique type IA topoisomerase in Bacillus cereus. Mol. Microbiol. 60:140-151.
    • (2006) Mol. Microbiol. , vol.60 , pp. 140-151
    • Li, Z.1    Hiasa, H.2    DiGate, R.3
  • 42
    • 84857409367 scopus 로고    scopus 로고
    • On the viability of Escherichia coli cells lacking DNA topoisomerase I
    • Stockum A, Lloyd RG, Rudolph CJ. 2012. On the viability of Escherichia coli cells lacking DNA topoisomerase I. BMC Microbiol. 12:26.
    • (2012) BMC Microbiol. , vol.12 , pp. 26
    • Stockum, A.1    Lloyd, R.G.2    Rudolph, C.J.3
  • 43
    • 80053942097 scopus 로고    scopus 로고
    • Posting date, Chapter 4.4.1, Initiation ofDNAreplication
    • Böck A, Curtiss R, III, Kaper JB, Karp PD, Neidhardt FC, Nyström T, Slauch JM, Squires CL, and Ussery D (ed), ASM Press, Washington, DC. doi:10.1128/ecosal.4.4.1
    • Leonard AC, Grimwade JE. 5 January 2010, posting date. Chapter 4.4.1, Initiation ofDNAreplication. In Böck A, Curtiss R, III, Kaper JB, Karp PD, Neidhardt FC, Nyström T, Slauch JM, Squires CL, and Ussery D (ed), EcoSal-Escherichia coli and Salmonella: cellular and molecular biology. ASM Press, Washington, DC. doi:10.1128/ecosal.4.4.1.
    • (2010) EcoSal-Escherichia coli and Salmonella: cellular and molecular biology
    • Leonard, A.C.1    Grimwade, J.E.2
  • 44
    • 0344441713 scopus 로고    scopus 로고
    • Eclipse-synchrony relationship in Escherichia coli strains with mutations affecting sequestration, initiation of replication and superhelicity of the bacterial chromosome
    • Olsson JA, Nordström K, Hjort K, Dasgupta S. 2003. Eclipse-synchrony relationship in Escherichia coli strains with mutations affecting sequestration, initiation of replication and superhelicity of the bacterial chromosome. J. Mol. Biol. 334:919-931.
    • (2003) J. Mol. Biol. , vol.334 , pp. 919-931
    • Olsson, J.A.1    Nordström, K.2    Hjort, K.3    Dasgupta, S.4
  • 45
    • 0030737725 scopus 로고    scopus 로고
    • Stable DNA replication: interplay between DNA replication homologous recombination, and transcription
    • Kogoma T. 1997. Stable DNA replication: interplay between DNA replication homologous recombination, and transcription. Microbiol. Mol. Biol. Rev. 61:212-238.
    • (1997) Microbiol. Mol. Biol. Rev. , vol.61 , pp. 212-238
    • Kogoma, T.1
  • 46
    • 0021711089 scopus 로고
    • Biology of bacterial deoxyribonucleic acid topoisomerases
    • Drlica, K. 1984 Biology of bacterial deoxyribonucleic acid topoisomerases. Microbiol. Rev. 48:273-289.
    • (1984) Microbiol. Rev. , vol.48 , pp. 273-289
    • Drlica, K.1
  • 47
    • 84870987232 scopus 로고    scopus 로고
    • Posting date, A role for topoisomerase III in Escherichia coli chromosome segregation
    • doi:10. 1111/mmi. 12039. [Epub ahead of print]
    • Perez-Cheeks BA, Lee C, Hayama R, and Marians KJ. 16 October 2012, posting date. A role for topoisomerase III in Escherichia coli chromosome segregation. Mol. Microbiol. doi:10. 1111/mmi. 12039. [Epub ahead of print].
    • (2012) Mol. Microbiol.
    • Perez-Cheeks, B.A.1    Lee, C.2    Hayama, R.3    Marians, K.J.4
  • 48
    • 44949225070 scopus 로고    scopus 로고
    • Resolution of converging replication forks by RecQ and topoisomerase III
    • Suski C, Marians KJ. 2008. Resolution of converging replication forks by RecQ and topoisomerase III. Cell 30:779-789.
    • (2008) Cell , vol.30 , pp. 779-789
    • Suski, C.1    Marians, K.J.2
  • 49
    • 0021256637 scopus 로고
    • Genetic inactivation of topoisomerase I suppresses a defect in initiation of chromosome replication in Escherichia coli
    • Louarn J, Bouché JP, Patte J, Louarn JM. 1984. Genetic inactivation of topoisomerase I suppresses a defect in initiation of chromosome replication in Escherichia coli. Mol. Gen. Genet. 195:170-174.
    • (1984) Mol. Gen. Genet. , vol.195 , pp. 170-174
    • Louarn, J.1    Bouché, J.P.2    Patte, J.3    Louarn, J.M.4


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