-
1
-
-
26944477491
-
MRNA processing and genomic instability
-
Aguilera A. 2005 mRNA processing and genomic instability Nat Struct Mol Biol 12 737 738
-
(2005)
Nat Struct Mol Biol
, vol.12
, pp. 737-738
-
-
Aguilera, A.1
-
2
-
-
0025212715
-
HPR1, a novel yeast gene that prevents intrachromosomal excision recombination, shows carboxy-terminal homology to the Saccharomyces cerevisiae TOP1 gene
-
Aguilera A. Klein HL. 1990 HPR1, a novel yeast gene that prevents intrachromosomal excision recombination, shows carboxy-terminal homology to the Saccharomyces cerevisiae TOP1 gene Mol Cell Biol 10 1439 1451
-
(1990)
Mol Cell Biol
, vol.10
, pp. 1439-1451
-
-
Aguilera, A.1
Klein, H.L.2
-
3
-
-
4744343661
-
RNase HI is required for efficient full-length RNA synthesis in the absence of topoisomerase I in Escherichia coli
-
Baaklini I. Hraiky C. Rallu F. Tse-Dinh Y-C. Drolet M. 2004 RNase HI is required for efficient full-length RNA synthesis in the absence of topoisomerase I in Escherichia coli Mol Microbiol 54 198 211
-
(2004)
Mol Microbiol
, vol.54
, pp. 198-211
-
-
Baaklini, I.1
Hraiky, C.2
Rallu, F.3
Tse-Dinh, Y.-C.4
Drolet, M.5
-
4
-
-
0024299511
-
Transcription-dependent DNA supercoiling in yeast DNA topoisomerase mutants
-
Brill SJ. Sternglanz R. 1988 Transcription-dependent DNA supercoiling in yeast DNA topoisomerase mutants Cell 54 403 411
-
(1988)
Cell
, vol.54
, pp. 403-411
-
-
Brill, S.J.1
Sternglanz, R.2
-
5
-
-
0023127037
-
Need for DNA topoisomerase activity as a swivel for DNA replication for transcription of ribosomal RNA
-
Brill SJ. DiNardo S. Voelkel-Meiman K. Sternglanz R. 1987 Need for DNA topoisomerase activity as a swivel for DNA replication for transcription of ribosomal RNA Nature 326 414 416
-
(1987)
Nature
, vol.326
, pp. 414-416
-
-
Brill, S.J.1
Dinardo, S.2
Voelkel-Meiman, K.3
Sternglanz, R.4
-
6
-
-
3042550193
-
Effects of RNA polymerase modifications on transcription-induced supercoiling and associated R-loop formation
-
Broccoli S. Rallu F. Sanscartier P. Cerritelli SM. Crouch RJ. Drolet M. 2004 Effects of RNA polymerase modifications on transcription-induced supercoiling and associated R-loop formation Mol Microbiol 52 1769 1779
-
(2004)
Mol Microbiol
, vol.52
, pp. 1769-1779
-
-
Broccoli, S.1
Rallu, F.2
Sanscartier, P.3
Cerritelli, S.M.4
Crouch, R.J.5
Drolet, M.6
-
7
-
-
0141803271
-
Transcription-driven DNA supercoiling and gene expression control
-
Chen CC. Wu HY. 2003 Transcription-driven DNA supercoiling and gene expression control Front Biosci 8 D430 D439
-
(2003)
Front Biosci
, vol.8
-
-
Chen, C.C.1
Wu, H.Y.2
-
8
-
-
0042733395
-
Direct interaction between E. coli RNA polymerase and the zinc ribbon domains of DNA topoisomerase I
-
Cheng B. Zhu CX. Ji C. Ahumada A. Tse-Dinh YC. 2003a Direct interaction between E. coli RNA polymerase and the zinc ribbon domains of DNA topoisomerase I J Biol Chem 278 30705 30710
-
(2003)
J Biol Chem
, vol.278
, pp. 30705-30710
-
-
Cheng, B.1
Zhu, C.X.2
Ji, C.3
Ahumada, A.4
Tse-Dinh, Y.C.5
-
10
-
-
0026442269
-
Dynamics of DNA supercoiling by transcription in Escherichia coli
-
Cook DN. Ma D. Pon NG. Hearst JE. 1992 Dynamics of DNA supercoiling by transcription in Escherichia coli Proc Natl Acad Sci USA 89 10603 10607
-
(1992)
Proc Natl Acad Sci USA
, vol.89
, pp. 10603-10607
-
-
Cook, D.N.1
Ma, D.2
Pon, N.G.3
Hearst, J.E.4
-
11
-
-
0029598833
-
RNA:DNA complex formation upon transcription of immunoglobulin switch regions: Implications for the mechanism and regulation of class switch recombination
-
Daniels GA. Lieber MR. 1995 RNA:DNA complex formation upon transcription of immunoglobulin switch regions: implications for the mechanism and regulation of class switch recombination Nucleic Acids Res 23 5006 5011
-
(1995)
Nucleic Acids Res
, vol.23
, pp. 5006-5011
-
-
Daniels, G.A.1
Lieber, M.R.2
-
12
-
-
0020426677
-
Escherichia coli DNA topoisomerase I mutants have compensatory mutations in DNA gyrase genes
-
DiNardo S. Voelkel KA. Sternglanz R. Reynolds AE. Wright A. 1982 Escherichia coli DNA topoisomerase I mutants have compensatory mutations in DNA gyrase genes Cell 31 43 51
-
(1982)
Cell
, vol.31
, pp. 43-51
-
-
Dinardo, S.1
Voelkel, K.A.2
Sternglanz, R.3
Reynolds, A.E.4
Wright, A.5
-
13
-
-
0026555506
-
Control of bacterial DNA supercoiling
-
Drlica K. 1992 Control of bacterial DNA supercoiling Mol Microbiol 6 425 433
-
(1992)
Mol Microbiol
, vol.6
, pp. 425-433
-
-
Drlica, K.1
-
14
-
-
0028006543
-
Hypernegative supercoiling of the DNA template during transcription elongation in vitro
-
Drolet M. Bi X. Liu LF. 1994 Hypernegative supercoiling of the DNA template during transcription elongation in vitro J Biol Chem 269 2068 2074
-
(1994)
J Biol Chem
, vol.269
, pp. 2068-2074
-
-
Drolet, M.1
Bi, X.2
Liu, L.F.3
-
15
-
-
0028966185
-
Overexpression of RNase H partially complements the growth defect of an Escherichia coli delta topA mutant: R-loop formation is a major problem in the absence of DNA topoisomerase I
-
Drolet M. Phoenix P. Menzel R. Massé E. Liu LF. Crouch RJ. 1995 Overexpression of RNase H partially complements the growth defect of an Escherichia coli delta topA mutant: R-loop formation is a major problem in the absence of DNA topoisomerase I Proc Natl Acad Sci USA 92 3526 3530
-
(1995)
Proc Natl Acad Sci USA
, vol.92
, pp. 3526-3530
-
-
Drolet, M.1
Phoenix, P.2
Menzel, R.3
Massé, E.4
Liu, L.F.5
Crouch, R.J.6
-
17
-
-
3042785608
-
Intracellular transcription of G-rich DNAs induces formation of G-loops, novel structures containing G4 DNA
-
Duquette ML. Handa P. Vincent JA. Taylor AF. Maizels N. 2004 Intracellular transcription of G-rich DNAs induces formation of G-loops, novel structures containing G4 DNA Genes Dev 18 1618 1629
-
(2004)
Genes Dev
, vol.18
, pp. 1618-1629
-
-
Duquette, M.L.1
Handa, P.2
Vincent, J.A.3
Taylor, A.F.4
Maizels, N.5
-
18
-
-
26944465454
-
AID binds to transcription-induced structures in c-MYC that map to regions associated with translocation and hypermutation
-
Duquette ML. Pham P. Goodman MF. Maizels N. 2005 AID binds to transcription-induced structures in c-MYC that map to regions associated with translocation and hypermutation Oncogene 24 5791 5798
-
(2005)
Oncogene
, vol.24
, pp. 5791-5798
-
-
Duquette, M.L.1
Pham, P.2
Goodman, M.F.3
Maizels, N.4
-
19
-
-
0033538419
-
Characterization of structural features important for T7 RNAP elongation complex stability reveals competing complex conformations and a role for the non-template strand in RNA displacement
-
Gopal V. Brieba LG. Guajardo R. McAllister WT. Sousa R. 1999 Characterization of structural features important for T7 RNAP elongation complex stability reveals competing complex conformations and a role for the non-template strand in RNA displacement J Mol Biol 290 411 431
-
(1999)
J Mol Biol
, vol.290
, pp. 411-431
-
-
Gopal, V.1
Brieba, L.G.2
Guajardo, R.3
McAllister, W.T.4
Sousa, R.5
-
20
-
-
7644223774
-
Why is transcription coupled to translation in bacteria?
-
Gowrishankar J. Harinarayanan R. 2004 Why is transcription coupled to translation in bacteria? Mol Microbiol 54 598 603
-
(2004)
Mol Microbiol
, vol.54
, pp. 598-603
-
-
Gowrishankar, J.1
Harinarayanan, R.2
-
21
-
-
0043237757
-
Host factor titration by chromosomal R-loops as a mechanism for runaway plasmid replication in transcription termination-defective mutants of Escherichia coli
-
Harinarayanan R. Gowrishankar J. 2003 Host factor titration by chromosomal R-loops as a mechanism for runaway plasmid replication in transcription termination-defective mutants of Escherichia coli J Mol Biol 332 31 46
-
(2003)
J Mol Biol
, vol.332
, pp. 31-46
-
-
Harinarayanan, R.1
Gowrishankar, J.2
-
22
-
-
0036953237
-
DNA topology-mediated control of global gene expression in Escherichia coli
-
Hatfield GW. Benham CJ. 2002 DNA topology-mediated control of global gene expression in Escherichia coli Annu Rev Genet 36 175 203
-
(2002)
Annu Rev Genet
, vol.36
, pp. 175-203
-
-
Hatfield, G.W.1
Benham, C.J.2
-
23
-
-
16544387644
-
Topological behavior of plasmid DNA
-
In. American Society for Microbiology Press Washington, DC pp.
-
Higgins NP. Vologodskii A. 2004 Topological behavior of plasmid DNA In Plasmid Biology Phillips G. Funnell B. (eds) Washington, DC American Society for Microbiology Press pp. 181 201
-
(2004)
Plasmid Biology*Phillips G.*Funnell B. (Eds)
, pp. 181-201
-
-
Higgins, N.P.1
Vologodskii, A.2
-
24
-
-
0034646628
-
RNase H overproduction corrects a defect at the level of transcription elongation during rRNA synthesis in the absence of DNA topoisomerase I in Escherichia coli
-
Hraiky C. Raymond MA. Drolet M. 2000 RNase H overproduction corrects a defect at the level of transcription elongation during rRNA synthesis in the absence of DNA topoisomerase I in Escherichia coli J Biol Chem 275 11257 11263
-
(2000)
J Biol Chem
, vol.275
, pp. 11257-11263
-
-
Hraiky, C.1
Raymond, M.A.2
Drolet, M.3
-
25
-
-
0141819093
-
Cotranscriptionally formed DNA:RNA hybrids mediate transcription elongation impairment and transcription-associated recombination
-
Huertas P. Aguilera A. 2003 Cotranscriptionally formed DNA:RNA hybrids mediate transcription elongation impairment and transcription-associated recombination Mol Cell 12 711 721
-
(2003)
Mol Cell
, vol.12
, pp. 711-721
-
-
Huertas, P.1
Aguilera, A.2
-
26
-
-
1842391776
-
Formation of an RNA primer for initiation of replication of ColE1 DNA by ribonuclease H
-
Itoh T. Tomizawa J. 1980 Formation of an RNA primer for initiation of replication of ColE1 DNA by ribonuclease H Proc Natl Acad Sci USA 77 2450 2454
-
(1980)
Proc Natl Acad Sci USA
, vol.77
, pp. 2450-2454
-
-
Itoh, T.1
Tomizawa, J.2
-
27
-
-
0021268392
-
Topoisomerase I confers specificity in enzymatic replication of the Escherichia coli chromosomal origin
-
Kaguni JM. Kornberg A. 1984 Topoisomerase I confers specificity in enzymatic replication of the Escherichia coli chromosomal origin J Biol Chem 259 8578 8583
-
(1984)
J Biol Chem
, vol.259
, pp. 8578-8583
-
-
Kaguni, J.M.1
Kornberg, A.2
-
29
-
-
0030737725
-
Stable DNA replication: Interplay between DNA replication, homologous recombination, and transcription
-
Kogoma T. 1997 Stable DNA replication: interplay between DNA replication, homologous recombination, and transcription Microbiol Mol Biol Rev 61 212 238
-
(1997)
Microbiol Mol Biol Rev
, vol.61
, pp. 212-238
-
-
Kogoma, T.1
-
31
-
-
0026522448
-
Effects of the template topology on RNA polymerase pausing during in vitro transcription of the E. coli rrnB leader region
-
Krohn M. Pardon B. Wagner R. 1992 Effects of the template topology on RNA polymerase pausing during in vitro transcription of the E. coli rrnB leader region Mol Microbiol 6 581 589
-
(1992)
Mol Microbiol
, vol.6
, pp. 581-589
-
-
Krohn, M.1
Pardon, B.2
Wagner, R.3
-
32
-
-
0029796960
-
Properties of a primer RNA-DNA hybrid at the mouse mitochondrial DNA leading-strand origin of replication
-
Lee DY. Clayton DA. 1996 Properties of a primer RNA-DNA hybrid at the mouse mitochondrial DNA leading-strand origin of replication J Biol Chem 271 24262 24269
-
(1996)
J Biol Chem
, vol.271
, pp. 24262-24269
-
-
Lee, D.Y.1
Clayton, D.A.2
-
33
-
-
0037047088
-
Potent stimulation of transcription-coupled DNA supercoiling by sequence-specific DNA-binding proteins
-
Leng F. McMacken R. 2002 Potent stimulation of transcription-coupled DNA supercoiling by sequence-specific DNA-binding proteins Proc Natl Acad Sci USA 99 9139 9144
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 9139-9144
-
-
Leng, F.1
McMacken, R.2
-
34
-
-
23744455164
-
Inactivation of the SR protein splicing factor ASF/SF2 results in genomic instability
-
Li X. Manley JL. 2005 Inactivation of the SR protein splicing factor ASF/SF2 results in genomic instability Cell 122 365 378
-
(2005)
Cell
, vol.122
, pp. 365-378
-
-
Li, X.1
Manley, J.L.2
-
35
-
-
0023433855
-
Supercoiling of the DNA template during transcription
-
Liu LF. Wang JC. 1987 Supercoiling of the DNA template during transcription Proc Natl Acad Sci USA 84 7024 7027
-
(1987)
Proc Natl Acad Sci USA
, vol.84
, pp. 7024-7027
-
-
Liu, L.F.1
Wang, J.C.2
-
36
-
-
0027467896
-
Anchoring of DNA to the bacterial cytoplasmic membrane through cotranscriptional synthesis of polypeptides encoding membrane proteins or proteins for export: A mechanism of plasmid hypernegative supercoiling in mutants deficient in DNA topoisomerase I
-
Lynch AS. Wang JC. 1993 Anchoring of DNA to the bacterial cytoplasmic membrane through cotranscriptional synthesis of polypeptides encoding membrane proteins or proteins for export: a mechanism of plasmid hypernegative supercoiling in mutants deficient in DNA topoisomerase I J Bacteriol 175 1645 1655
-
(1993)
J Bacteriol
, vol.175
, pp. 1645-1655
-
-
Lynch, A.S.1
Wang, J.C.2
-
37
-
-
0033523016
-
Relaxation of transcription-induced negative supercoiling is an essential function of Escherichia coli DNA topoisomerase I
-
Massé E. Drolet M. 1999a Relaxation of transcription-induced negative supercoiling is an essential function of Escherichia coli DNA topoisomerase I J Biol Chem 274 16654 16658
-
(1999)
J Biol Chem
, vol.274
, pp. 16654-16658
-
-
Massé, E.1
Drolet, M.2
-
38
-
-
0033522905
-
Escherichia coli DNA topoisomerase I inhibits R-loop formation by relaxing transcription-induced negative supercoiling
-
Massé E. Drolet M. 1999b Escherichia coli DNA topoisomerase I inhibits R-loop formation by relaxing transcription-induced negative supercoiling J Biol Chem 274 16659 16664
-
(1999)
J Biol Chem
, vol.274
, pp. 16659-16664
-
-
Massé, E.1
Drolet, M.2
-
39
-
-
0033607485
-
R-loop-dependent hypernegative supercoiling in Escherichia coli topA mutants preferentially occurs at low temperatures and correlates with growth inhibition
-
Massé E. Drolet M. 1999c R-loop-dependent hypernegative supercoiling in Escherichia coli topA mutants preferentially occurs at low temperatures and correlates with growth inhibition J Mol Biol 294 321 332
-
(1999)
J Mol Biol
, vol.294
, pp. 321-332
-
-
Massé, E.1
Drolet, M.2
-
40
-
-
0030995436
-
DNA topoisomerases regulate R-loop formation during transcription of the rrnB operon in Escherichia coli
-
Massé E. Phoenix P. Drolet M. 1997 DNA topoisomerases regulate R-loop formation during transcription of the rrnB operon in Escherichia coli J Biol Chem 272 12816 12823
-
(1997)
J Biol Chem
, vol.272
, pp. 12816-12823
-
-
Massé, E.1
Phoenix, P.2
Drolet, M.3
-
41
-
-
0021344444
-
RNase H confers specificity in the dnaA-dependent initiation of replication at the unique origin of the Escherichia coli chromosome in vivo and in vitro
-
Ogawa T. Pickett GG. Kogoma T. Kornberg A. 1984 RNase H confers specificity in the dnaA-dependent initiation of replication at the unique origin of the Escherichia coli chromosome in vivo and in vitro Proc Natl Acad Sci USA 81 1040 1044
-
(1984)
Proc Natl Acad Sci USA
, vol.81
, pp. 1040-1044
-
-
Ogawa, T.1
Pickett, G.G.2
Kogoma, T.3
Kornberg, A.4
-
43
-
-
0031028203
-
Roles of DNA topoisomerases in the regulation of R-loop formation in vitro
-
Phoenix P. Raymond MA. Massé E. Drolet M. 1997 Roles of DNA topoisomerases in the regulation of R-loop formation in vitro J Biol Chem 272 1473 1479
-
(1997)
J Biol Chem
, vol.272
, pp. 1473-1479
-
-
Phoenix, P.1
Raymond, M.A.2
Massé, E.3
Drolet, M.4
-
44
-
-
3142774839
-
Topological domain structure of the Escherichia coli chromosome
-
Postow L. Hardy CD. Arsuaga J. Cozzarelli NR. 2004 Topological domain structure of the Escherichia coli chromosome Genes Dev 18 1766 1779
-
(2004)
Genes Dev
, vol.18
, pp. 1766-1779
-
-
Postow, L.1
Hardy, C.D.2
Arsuaga, J.3
Cozzarelli, N.R.4
-
45
-
-
2642672756
-
Topoisomerase I mutants: The gene on pBR322 that encodes resistance to tetracycline affects plasmid DNA supercoiling
-
Pruss GJ. Drlica K. 1986 Topoisomerase I mutants: the gene on pBR322 that encodes resistance to tetracycline affects plasmid DNA supercoiling Proc Natl Acad Sci USA 83 8952 8956
-
(1986)
Proc Natl Acad Sci USA
, vol.83
, pp. 8952-8956
-
-
Pruss, G.J.1
Drlica, K.2
-
46
-
-
0020426111
-
Escherichia coli DNA topoisomerase I mutants: Increased supercoiling is corrected by mutations near gyrase genes
-
Pruss GJ. Manes SH. Drlica K. 1982 Escherichia coli DNA topoisomerase I mutants: increased supercoiling is corrected by mutations near gyrase genes Cell 31 35 42
-
(1982)
Cell
, vol.31
, pp. 35-42
-
-
Pruss, G.J.1
Manes, S.H.2
Drlica, K.3
-
47
-
-
9444291891
-
Effect of the deletion of the sigma 32-dependent promoter (P1) of the Escherichia coli topoisomerase I gene on thermotolerance
-
Qi H. Menzel R. Tse-Dinh YC. 1996 Effect of the deletion of the sigma 32-dependent promoter (P1) of the Escherichia coli topoisomerase I gene on thermotolerance Mol Microbiol 21 703 711
-
(1996)
Mol Microbiol
, vol.21
, pp. 703-711
-
-
Qi, H.1
Menzel, R.2
Tse-Dinh, Y.C.3
-
48
-
-
33645084828
-
Increased sensitivity to oxidative challenges associated with topA deletion in Escherichia coli
-
Qi H. Menzel R. Tse-Dinh YC. 1999 Increased sensitivity to oxidative challenges associated with topA deletion in Escherichia coli FEMS Microbiol Lett 182 829 832
-
(1999)
FEMS Microbiol Lett
, vol.182
, pp. 829-832
-
-
Qi, H.1
Menzel, R.2
Tse-Dinh, Y.C.3
-
49
-
-
0026502006
-
Direct evidence for the effect of transcription on local DNA supercoiling in vivo
-
Rahmouni AR. Wells RD. 1992 Direct evidence for the effect of transcription on local DNA supercoiling in vivo J Mol Biol 223 131 144
-
(1992)
J Mol Biol
, vol.223
, pp. 131-144
-
-
Rahmouni, A.R.1
Wells, R.D.2
-
50
-
-
0021855188
-
Genetic analysis of mutations that compensate for loss of Escherichia coli DNA topoisomerase I
-
Raji A. Zabel DJ. Laufer CS. Depew RE. 1985 Genetic analysis of mutations that compensate for loss of Escherichia coli DNA topoisomerase I J Bacteriol 162 1173 1179
-
(1985)
J Bacteriol
, vol.162
, pp. 1173-1179
-
-
Raji, A.1
Zabel, D.J.2
Laufer, C.S.3
Depew, R.E.4
-
51
-
-
0242308518
-
Topoisomerase function during bacterial responses to environmental challenge
-
Rui S. Tse-Dinh YC. 2003 Topoisomerase function during bacterial responses to environmental challenge Front Biosci 8 D256 D263
-
(2003)
Front Biosci
, vol.8
-
-
Rui, S.1
Tse-Dinh, Y.C.2
-
52
-
-
0026725797
-
Topoisomerases and yeast rRNA transcription: Negative supercoiling stimulates initiation and topoisomerase activity is required for elongation
-
Schultz MC. Brill SJ. Ju Q. Sternglanz R. Reeder RH. 1992 Topoisomerases and yeast rRNA transcription: negative supercoiling stimulates initiation and topoisomerase activity is required for elongation Genes Dev 6 1332 1341
-
(1992)
Genes Dev
, vol.6
, pp. 1332-1341
-
-
Schultz, M.C.1
Brill, S.J.2
Ju, Q.3
Sternglanz, R.4
Reeder, R.H.5
-
53
-
-
18444412915
-
Measuring chromosome dynamics on different time scales using resolvases with varying half-lives
-
Stein RA. Deng S. Higgins NP. 2005 Measuring chromosome dynamics on different time scales using resolvases with varying half-lives Mol Microbiol 56 1049 1061
-
(2005)
Mol Microbiol
, vol.56
, pp. 1049-1061
-
-
Stein, R.A.1
Deng, S.2
Higgins, N.P.3
-
54
-
-
12844250649
-
Viability of Escherichia coli topA mutants lacking DNA topoisomerase I
-
Stupina VA. Wang JC. 2005 Viability of Escherichia coli topA mutants lacking DNA topoisomerase I J Biol Chem 280 355 360
-
(2005)
J Biol Chem
, vol.280
, pp. 355-360
-
-
Stupina, V.A.1
Wang, J.C.2
-
56
-
-
0034604622
-
Transcription-induced cleavage of immunoglobulin switch regions by nucleotide excision repair nucleases in vitro
-
Tian M. Alt FW. 2000 Transcription-induced cleavage of immunoglobulin switch regions by nucleotide excision repair nucleases in vitro J Biol Chem 275 24163 24172
-
(2000)
J Biol Chem
, vol.275
, pp. 24163-24172
-
-
Tian, M.1
Alt, F.W.2
-
57
-
-
13444288385
-
DNA supercoiling - A global transcriptional regulator for enterobacterial growth?
-
Travers A. Muskhelishvili G. 2005 DNA supercoiling - a global transcriptional regulator for enterobacterial growth? Nat Rev Microbiol 3 157 169
-
(2005)
Nat Rev Microbiol
, vol.3
, pp. 157-169
-
-
Travers, A.1
Muskhelishvili, G.2
-
58
-
-
0024968110
-
Transcription-driven supercoiling of DNA: Direct biochemical evidence from in vitro studies
-
Tsao YP. Wu H-Y. Liu LF. 1989 Transcription-driven supercoiling of DNA: direct biochemical evidence from in vitro studies Cell 56 111 118
-
(1989)
Cell
, vol.56
, pp. 111-118
-
-
Tsao, Y.P.1
Wu, H.-Y.2
Liu, L.F.3
-
59
-
-
0033966498
-
Increased sensitivity to oxidative challenges associated with topA deletion in Escherichia coli
-
Tse-Dinh YC. 2000 Increased sensitivity to oxidative challenges associated with topA deletion in Escherichia coli J Bacteriol 182 829 832
-
(2000)
J Bacteriol
, vol.182
, pp. 829-832
-
-
Tse-Dinh, Y.C.1
-
60
-
-
0025328743
-
Ribosomes as sensors of heat and cold shock in Escherichia coli
-
VanBogelen RA. Neidhardt FC. 1990 Ribosomes as sensors of heat and cold shock in Escherichia coli Proc Natl Acad Sci USA 87 5589 5593
-
(1990)
Proc Natl Acad Sci USA
, vol.87
, pp. 5589-5593
-
-
Vanbogelen, R.A.1
Neidhardt, F.C.2
-
61
-
-
0026703360
-
DNA twist as a transcriptional sensor for environmental changes
-
Wang JY. Syvanen M. 1992 DNA twist as a transcriptional sensor for environmental changes Mol Microbiol 6 1861 1866
-
(1992)
Mol Microbiol
, vol.6
, pp. 1861-1866
-
-
Wang, J.Y.1
Syvanen, M.2
-
63
-
-
0034065133
-
Escherichia coli response to hydrogen peroxide: A role for DNA supercoiling, topoisomerase I and Fis
-
Weinstein-Fischer D. Elgrably-Weiss M. Altuvia S. 2000 Escherichia coli response to hydrogen peroxide: a role for DNA supercoiling, topoisomerase I and Fis Mol Microbiol 35 1413 1420
-
(2000)
Mol Microbiol
, vol.35
, pp. 1413-1420
-
-
Weinstein-Fischer, D.1
Elgrably-Weiss, M.2
Altuvia, S.3
-
64
-
-
1142310578
-
Structural basis of transcription: Separation of RNA from DNA by RNA polymerase II
-
Westover KD. Bushnell DA. Kornberg RD. 2004 Structural basis of transcription: separation of RNA from DNA by RNA polymerase II Science 303 1014 1016
-
(2004)
Science
, vol.303
, pp. 1014-1016
-
-
Westover, K.D.1
Bushnell, D.A.2
Kornberg, R.D.3
-
65
-
-
0024279845
-
Transcription generates positively and negatively supercoiled domains in the template
-
Wu HY. Shyy SH. Wang JC. Liu LF. 1988 Transcription generates positively and negatively supercoiled domains in the template Cell 53 433 440
-
(1988)
Cell
, vol.53
, pp. 433-440
-
-
Wu, H.Y.1
Shyy, S.H.2
Wang, J.C.3
Liu, L.F.4
-
66
-
-
0028917766
-
A persistent RNA-DNA hybrid is formed during transcription at a phylogenetically conserved mitochondrial DNA sequence
-
Xu B. Clayton DA. 1995 A persistent RNA-DNA hybrid is formed during transcription at a phylogenetically conserved mitochondrial DNA sequence Mol Cell Biol 15 580 589
-
(1995)
Mol Cell Biol
, vol.15
, pp. 580-589
-
-
Xu, B.1
Clayton, D.A.2
-
67
-
-
0037650190
-
R-loops at immunoglobulin class switch regions in the chromosomes of stimulated B cells
-
Yu K. Chedin F. Hsieh CL. Wilson TE. Lieber MR. 2003 R-loops at immunoglobulin class switch regions in the chromosomes of stimulated B cells Nat Immunol 4 442 451
-
(2003)
Nat Immunol
, vol.4
, pp. 442-451
-
-
Yu, K.1
Chedin, F.2
Hsieh, C.L.3
Wilson, T.E.4
Lieber, M.R.5
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