-
1
-
-
0038606194
-
Community assembly, niche conservatism, and adaptive evolution in changing environments
-
Ackerly, D. D. (2003). Community assembly, niche conservatism, and adaptive evolution in changing environments. Int. J. Plant Sci. 164, S165-S184.
-
(2003)
Int. J. Plant Sci.
, vol.164
-
-
Ackerly, D.D.1
-
2
-
-
0016355478
-
A new look at the statistical model identification
-
Akaike, H. (1974). A new look at the statistical model identification. IEEE Trans. Automat. Contr. 19, 716-723.
-
(1974)
IEEE Trans. Automat. Contr.
, vol.19
, pp. 716-723
-
-
Akaike, H.1
-
3
-
-
84855949949
-
Using network analysis to explore cooccurrence patterns in soil microbial communities
-
Barberán, A., Bates, S. T., Casamayor, E. O., and Fierer, N. (2012). Using network analysis to explore cooccurrence patterns in soil microbial communities. ISME J. 6, 343-351.
-
(2012)
ISME J
, vol.6
, pp. 343-351
-
-
Barberán, A.1
Bates, S.T.2
Casamayor, E.O.3
Fierer, N.4
-
4
-
-
61649118780
-
Plant species and soil type cooperatively shape the structure and function of microbial communities in the rhizosphere
-
Berg, G., and Smalla, K. (2009). Plant species and soil type cooperatively shape the structure and function of microbial communities in the rhizosphere. FEMS Microbiol. Ecol. 68, 1-13.
-
(2009)
FEMS Microbiol. Ecol.
, vol.68
, pp. 1-13
-
-
Berg, G.1
Smalla, K.2
-
5
-
-
77954658843
-
Rooting theories of plant community ecology in microbial interactions
-
Bever, J. D., Dickie, I. A., Facelli, E., Facelli, J. M., Klironomos, J., Moora, M., Rillig, M. C., Stock, W. D., Tibbett, M., and Zobel, M. (2010). Rooting theories of plant community ecology in microbial interactions. Trends Ecol. Evol. (Amst.) 25, 468-478.
-
(2010)
Trends Ecol. Evol. (Amst.)
, vol.25
, pp. 468-478
-
-
Bever, J.D.1
Dickie, I.A.2
Facelli, E.3
Facelli, J.M.4
Klironomos, J.5
Moora, M.6
Rillig, M.C.7
Stock, W.D.8
Tibbett, M.9
Zobel, M.10
-
6
-
-
77957744523
-
Divergent composition but similar function of soil food webs of individual plants: plant species and community effects
-
Bezemer, T. M., Fountain, M. T., Barea, J. M., Christensen, S., Dekker, S. C., Duyts, H., van Hal, R., Harvey, J. A., Hedlund, K., Maraun, M., Mikola, J., Mladenov, A. G., Robin, C., de Ruiter, P. C., Scheu, S., Setala, H., Smilaure, P., and van der Puttern, W. H. (2010). Divergent composition but similar function of soil food webs of individual plants: plant species and community effects. Ecology 91, 3027-3036.
-
(2010)
Ecology
, vol.91
, pp. 3027-3036
-
-
Bezemer, T.M.1
Fountain, M.T.2
Barea, J.M.3
Christensen, S.4
Dekker, S.C.5
Duyts, H.6
van Hal, R.7
Harvey, J.A.8
Hedlund, K.9
Maraun, M.10
Mikola, J.11
Mladenov, A.G.12
Robin, C.13
De Ruiter, P.C.14
Scheu, S.15
Setala, H.16
Smilaure, P.17
Van Der Puttern, W.H.18
-
7
-
-
0029804430
-
Cellular interactions between arbuscular mycorrhizal fungi and rhizosphere bacteria
-
Bianciotto, V., Minerdi, D., Perotto, S., Bonfante, P., and Vegetale, B. (1996). Cellular interactions between arbuscular mycorrhizal fungi and rhizosphere bacteria. Protoplasma 193, 23-131.
-
(1996)
Protoplasma
, vol.193
, pp. 23-131
-
-
Bianciotto, V.1
Minerdi, D.2
Perotto, S.3
Bonfante, P.4
Vegetale, B.5
-
8
-
-
70349551729
-
Plants,mycorrhizal fungi,and bacteria: a network of interactions
-
Bonfante, P., and Anca, I. A. (2009). Plants,mycorrhizal fungi,and bacteria: a network of interactions. Annu. Rev. Microbiol. 63, 363-383.
-
(2009)
Annu. Rev. Microbiol.
, vol.63
, pp. 363-383
-
-
Bonfante, P.1
Anca, I.A.2
-
10
-
-
0942289150
-
Litter effects of two co-occurring alpine species on plant growth, microbial activity and immobilization of nitrogen
-
Bowman, W. D., Steltzer, H., Rosenstiel, T. N., Cleveland, C. C., and Meier, C. L. (2004). Litter effects of two co-occurring alpine species on plant growth, microbial activity and immobilization of nitrogen. Oikos 140, 336-344.
-
(2004)
Oikos
, vol.140
, pp. 336-344
-
-
Bowman, W.D.1
Steltzer, H.2
Rosenstiel, T.N.3
Cleveland, C.C.4
Meier, C.L.5
-
11
-
-
77956094890
-
-
2nd Edn. New York: Springer
-
Brenner D. J., Krieg N. R., and Staley, J. T. (2005). Bergey's Manual of Systematic Bacteriology. Vol. Two, Part C, The Alpha-, Beta-, Delta-, and Epsilonproteobacteria, 2nd Edn. New York: Springer.
-
(2005)
Bergey's Manual of Systematic Bacteriology. Vol. Two, Part C, The Alpha-, Beta-, Delta-, and Epsilonproteobacteria
-
-
Brenner, D.J.1
Krieg, N.R.2
Staley, J.T.3
-
12
-
-
0037349347
-
Inclusion of facilitation into ecological theory
-
Bruno, J. F., Stachowicz, J. J., and Bertness,M. D. (2003). Inclusion of facilitation into ecological theory. Trends Ecol. Evol. (Amst.) 18, 119-125.
-
(2003)
Trends Ecol. Evol. (Amst.)
, vol.18
, pp. 119-125
-
-
Bruno, J.F.1
Stachowicz, J.J.2
Bertness, M.D.3
-
13
-
-
34249686035
-
Stable isotope probing with 15N2 reveals noncultivated diazotroph in soil
-
Buckley, D. H., Huangyutitham, V., Hsu, S., and Nelson, T. A. (2007). Stable isotope probing with 15N2 reveals noncultivated diazotroph in soil. Appl. Environ. Microbiol. 73, 3196-3204.
-
(2007)
Appl. Environ. Microbiol.
, vol.73
, pp. 3196-3204
-
-
Buckley, D.H.1
Huangyutitham, V.2
Hsu, S.3
Nelson, T.A.4
-
14
-
-
0031284545
-
Competition and facilitation: a synthetic approach to interactions in plant communities
-
Callaway, R. M., and Walker, L. R. (1997). Competition and facilitation: a synthetic approach to interactions in plant communities. Ecology 78, 1958-1965.
-
(1997)
Ecology
, vol.78
, pp. 1958-1965
-
-
Callaway, R.M.1
Walker, L.R.2
-
15
-
-
84861347511
-
The Western English Channel contains a persistent microbial seed bank
-
doi: 10.1038/ismej.2011.162
-
Caporaso, J. G., Paszkiewicz, K., Field, D., Knight, R., and Gilbert, J. A. (2011). The Western English Channel contains a persistent microbial seed bank. ISME J. doi: 10.1038/ismej.2011.162
-
(2011)
ISME J
-
-
Caporaso, J.G.1
Paszkiewicz, K.2
Field, D.3
Knight, R.4
Gilbert, J.A.5
-
16
-
-
77955355130
-
Community development along a proglacial chronosequence: are above-ground and below-ground community structure controlled more by biotic than abiotic factors?
-
Carlson, M. L., Flagstad, L. A., Gillet, F., and Mitchell, E. A. D. (2012). Community development along a proglacial chronosequence: are above-ground and below-ground community structure controlled more by biotic than abiotic factors? J. Ecol. 98, 1084-1095.
-
(2012)
J. Ecol
, vol.98
, pp. 1084-1095
-
-
Carlson, M.L.1
Flagstad, L.A.2
Gillet, F.3
Mitchell, E.A.D.4
-
17
-
-
77649260607
-
Genomic and evolutionary comparisons of diazotrophic and pathogenic bacteria of the order Rhizobiales
-
doi: 10.1186/1471-2180-10-37
-
Carvalho, F. M., Souza, R. C., Barcellos, F. G., Hungria, M., and Vasconcelos, A. T. (2010). Genomic and evolutionary comparisons of diazotrophic and pathogenic bacteria of the order Rhizobiales. BMC Microbiol. 10, 37. doi: 10.1186/1471-2180-10-37
-
(2010)
BMC Microbiol
, vol.10
, pp. 37
-
-
Carvalho, F.M.1
Souza, R.C.2
Barcellos, F.G.3
Hungria, M.4
Vasconcelos, A.T.5
-
18
-
-
23944483557
-
Mycorrhiza-plant colonization patterns on a subalpine glacier forefront as a model system of primary succession
-
Cazares, E., Trappe, J. M., and Jumpponen, A. (2005). Mycorrhiza-plant colonization patterns on a subalpine glacier forefront as a model system of primary succession. Mycorrhiza 15, 405-416.
-
(2005)
Mycorrhiza
, vol.15
, pp. 405-416
-
-
Cazares, E.1
Trappe, J.M.2
Jumpponen, A.3
-
19
-
-
0027975183
-
Mechanisms of primary succession following deglaciation at Glacier Bay
-
Chapin, F. S., Walker, L. R., Fastie, C. L., and Sharman, L. C. (1994). Mechanisms of primary succession following deglaciation at Glacier Bay, Alaska. Ecol. Monogr. 64, 149-175.
-
(1994)
Alaska. Ecol. Monogr.
, vol.64
, pp. 149-175
-
-
Chapin, F.S.1
Walker, L.R.2
Fastie, C.L.3
Sharman, L.C.4
-
21
-
-
70350694168
-
Pseudonocardia endophytica sp. nov., isolated from the pharmaceutical plant Lobelia clavata
-
Chen, H., Qin, S., Li, J., Zhang, Y., Xu, L., Jiang, C., Kim, C., and Li, W. (2009). Pseudonocardia endophytica sp. nov., isolated from the pharmaceutical plant Lobelia clavata. Int. J. Syst. Evol. Microbiol. 59, 559-563.
-
(2009)
Int. J. Syst. Evol. Microbiol.
, vol.59
, pp. 559-563
-
-
Chen, H.1
Qin, S.2
Li, J.3
Zhang, Y.4
Xu, L.5
Jiang, C.6
Kim, C.7
Li, W.8
-
22
-
-
0035665789
-
Facilitation and competition on gradients in alpine plant communities
-
Choler, P., Michalet, R., and Callaway, R. M. (2001). Facilitation and competition on gradients in alpine plant communities. Ecology 82, 3295-3308.
-
(2001)
Ecology
, vol.82
, pp. 3295-3308
-
-
Choler, P.1
Michalet, R.2
Callaway, R.M.3
-
23
-
-
25144473901
-
Use of plant growth-promoting bacteria for biocontrol of plant diseases: principles, mechanisms of action, and future prospects
-
Compant, S., Duffy, B., Nowak, J., Clement, C., and Barka, E. A. (2005). Use of plant growth-promoting bacteria for biocontrol of plant diseases: principles, mechanisms of action, and future prospects. Appl. Environ. Microbiol. 71, 4951-4959.
-
(2005)
Appl. Environ. Microbiol.
, vol.71
, pp. 4951-4959
-
-
Compant, S.1
Duffy, B.2
Nowak, J.3
Clement, C.4
Barka, E.A.5
-
24
-
-
44849124999
-
Diversity and occurrence of Burk-holderia spp. in the natural environment
-
Compant, S., Nowak, J., Coeneye, T., Clement, C., and Barka,A. B. (2008). Diversity and occurrence of Burk-holderia spp. in the natural environment. FEMS Microbiol. Rev. 32, 607-626.
-
(2008)
FEMS Microbiol. Rev.
, vol.32
, pp. 607-626
-
-
Compant, S.1
Nowak, J.2
Coeneye, T.3
Clement, C.4
Barka, A.B.5
-
26
-
-
33746061683
-
Greengenes, a Chimera-Checked 16S rRNA gene database and workbench compatible with ARB
-
DeSantis, T. Z., Hugenholtz, P., Larsen, N., Rojas, M., Brodie, E. L., Keller, K., Huber, T., Dalevi, D., Hu, P., and Andersen, G. L. (2006). Greengenes, a Chimera-Checked 16S rRNA gene database and workbench compatible with ARB. Appl. Environ. Microbiol. 72, 5069-5072.
-
(2006)
Appl. Environ. Microbiol
-
-
DeSantis, T.Z.1
Hugenholtz, P.2
Larsen, N.3
Rojas, M.4
Brodie, E.L.5
Keller, K.6
Huber, T.7
Dalevi, D.8
Hu, P.9
Andersen, G.L.10
-
27
-
-
0002751004
-
Assembly of species communities
-
Eds M. L. Cody and J. M. Diamond (Cambridge MA: Harvard University Press)
-
Diamond, J. M. (1975). "Assembly of species communities," in Ecology and Evolution of Communities, eds M. L. Cody and J. M. Diamond (Cambridge, MA: Harvard University Press), 342-444.
-
(1975)
Ecology and Evolution of Communities
, pp. 342-444
-
-
Diamond, J.M.1
-
28
-
-
0001134850
-
Plant functional traits and environmental filters at a regional scale
-
Diaz, S., Cabido, M., and Casanoves, F. (1998). Plant functional traits and environmental filters at a regional scale. J. Veg. Sci. 9, 113-122.
-
(1998)
J. Veg. Sci.
, vol.9
, pp. 113-122
-
-
Diaz, S.1
Cabido, M.2
Casanoves, F.3
-
29
-
-
19044382252
-
Persistence of topographic controls on the spatial distribution of snow in rugged mountain terrain, Colorado
-
doi:10.1029/2003WR002973
-
Erickson, T. A., Williams, M. W., and Winstral, A. (2005). Persistence of topographic controls on the spatial distribution of snow in rugged mountain terrain, Colorado, United States. Water Resour. Res. 41, W04014. doi:10.1029/2003WR002973
-
(2005)
United States. Water Resour. Res.
, vol.41
-
-
Erickson, T.A.1
Williams, M.W.2
Winstral, A.3
-
30
-
-
67649304645
-
Links between plant community composition, soil organic matter quality and microbial communities in contrasting tundra habitats
-
Eskelinen, A., Stark, S., and Män-nistö, M. (2009). Links between plant community composition, soil organic matter quality and microbial communities in contrasting tundra habitats. Oecologia 161, 113-123.
-
(2009)
Oecologia
, vol.161
, pp. 113-123
-
-
Eskelinen, A.1
Stark, S.2
Männistö, M.3
-
31
-
-
56649124715
-
The influence of sex, handedness, and washing on the diversity of hand surface bacteria
-
Fierer, N., Hamady, M., Lauber, C. L., and Knight, R. (2008). The influence of sex, handedness, and washing on the diversity of hand surface bacteria. Proc. Natl. Acad. Sci. U.S.A. 105, 17994-17999.
-
(2008)
Proc. Natl. Acad. Sci. U.S.A.
, vol.105
, pp. 17994-17999
-
-
Fierer, N.1
Hamady, M.2
Lauber, C.L.3
Knight, R.4
-
32
-
-
0028984405
-
Nitrogen mineralization and microbial biomass nitrogen dynamics in three alpine tundra communities
-
Fisk, M. C., and Schmidt, S. K. (1995). Nitrogen mineralization and microbial biomass nitrogen dynamics in three alpine tundra communities. Soil Sci. Soc. Am. J. 59, 1036-1043.
-
(1995)
Soil Sci. Soc. Am. J.
, vol.59
, pp. 1036-1043
-
-
Fisk, M.C.1
Schmidt, S.K.2
-
33
-
-
61449176188
-
Soil CO2 flux and photoautotrophic community composition in high-elevation, "barren" soil.
-
Freeman, K. R., Pescador, M. Y., Reed, S. C., Costello, E. K., Robeson, M. S., and Schmidt, S. K. (2009). Soil CO2 flux and photoautotrophic community composition in high-elevation, "barren" soil. Environ. Microbiol. 11, 674-686.
-
(2009)
Environ. Microbiol.
, vol.11
, pp. 674-686
-
-
Freeman, K.R.1
Pescador, M.Y.2
Reed, S.C.3
Costello, E.K.4
Robeson, M.S.5
Schmidt, S.K.6
-
34
-
-
77954241658
-
The large-scale organization of the bacterial network of ecological cooccurrence interactions
-
Freilich, S., Kreimer, A., Meilijson, I., Gophna, U., Sharan, R., and Ruppin, E. (2010). The large-scale organization of the bacterial network of ecological cooccurrence interactions. Nucleic Acids Res. 38, 3857-3868.
-
(2010)
Nucleic Acids Res
, vol.38
, pp. 3857-3868
-
-
Freilich, S.1
Kreimer, A.2
Meilijson, I.3
Gophna, U.4
Sharan, R.5
Ruppin, E.6
-
35
-
-
54549105879
-
Community structure of marine bacterioplankton: patterns, networks, and relationships to function
-
Fuhrman, J. A., and Steele, J. A. (2008). Community structure of marine bacterioplankton: patterns, networks, and relationships to function. Aquat. Microb. Ecol. 53, 69-81.
-
(2008)
Aquat. Microb. Ecol.
, vol.53
, pp. 69-81
-
-
Fuhrman, J.A.1
Steele, J.A.2
-
36
-
-
84861979991
-
Characterizing microbial communities through space and time
-
Gonzalez, A., King, A., Robeson Ii, M. S., Song, S., Shade, A., Metcalf, J. L., and Knight, R. (2011). Characterizing microbial communities through space and time. Curr. Opin. Biotechnol. 24, 431-436.
-
(2011)
Curr. Opin. Biotechnol.
, vol.24
, pp. 431-436
-
-
Gonzalez, A.1
King, A.2
Robeson Ii, M.S.3
Song, S.4
Shade, A.5
Metcalf, J.L.6
Knight, R.7
-
37
-
-
22044440860
-
Impact of flooding on soil bacterial communities associated with poplar (Populus sp ) trees.
-
Graff,A.,and Conrad,R. (2006). Impact of flooding on soil bacterial communities associated with poplar (Populus sp.) trees. FEMS Microbiol. Ecol. 53, 401-415.
-
(2006)
FEMS Microbiol. Ecol.
, vol.53
, pp. 401-415
-
-
Graff, A.1
Conrad, R.2
-
38
-
-
0032425501
-
Benefits of plant diversity to ecosystems: immediate, filter and founder effects
-
Grime, J. P. (1998). Benefits of plant diversity to ecosystems: immediate, filter and founder effects. J. Ecol. 86, 902-910.
-
(1998)
J. Ecol.
, vol.86
, pp. 902-910
-
-
Grime, J.P.1
-
39
-
-
0034143992
-
Fine-scale vascular plant species richness in different alpine vegetation types: relationships with biomass and cover
-
Grytnes, J. A. (2000). Fine-scale vascular plant species richness in different alpine vegetation types: relationships with biomass and cover. J. Veg. Sci. 11, 87-92.
-
(2000)
J. Veg. Sci.
, vol.11
, pp. 87-92
-
-
Grytnes, J.A.1
-
40
-
-
57349182720
-
Plant host habitat and root exudates shape soil bacterial community structure
-
Haichar, F. Z., Marol, C., Berge, O., Rangel-Castro, J. I., Prosser, J. I., Balesdent, J., Heulin, T., and Achouak,W. (2008). Plant host habitat and root exudates shape soil bacterial community structure. ISME J. 2, 1221-1230.
-
(2008)
ISME J
, vol.2
, pp. 1221-1230
-
-
Haichar, F.Z.1
Marol, C.2
Berge, O.3
Rangel-Castro, J.I.4
Prosser, J.I.5
Balesdent, J.6
Heulin, T.7
Achouak, W.8
-
41
-
-
73449128271
-
Fast unifrac: facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and phylochip data
-
Hamady, M., Lozupone, C., and Knight, R. (2010). Fast unifrac: facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and phylochip data. ISME J. 4, 17-27.
-
(2010)
ISME J
, vol.4
, pp. 17-27
-
-
Hamady, M.1
Lozupone, C.2
Knight, R.3
-
43
-
-
79952007388
-
Soil beneficial bacteria and their role in plant growth promotion: a review
-
Hayat, R., Ali, S., Amara, U., Khalid, R., and Ahmed, I. (2010). Soil beneficial bacteria and their role in plant growth promotion: a review. Ann. Microbiol. 60, 579-598.
-
(2010)
Ann. Microbiol.
, vol.60
, pp. 579-598
-
-
Hayat, R.1
Ali, S.2
Amara, U.3
Khalid, R.4
Ahmed, I.5
-
44
-
-
27544495496
-
Foliar and fungal 15N:14N ratios reflect development of mycorrhizae and nitrogen supply during primary succession: testing analytical models
-
Hobbie, E. A., Jumpponen, A., and Trappe, J. (2005). Foliar and fungal 15N:14N ratios reflect development of mycorrhizae and nitrogen supply during primary succession: testing analytical models. Oecologia 146, 258-268.
-
(2005)
Oecologia
, vol.146
, pp. 258-268
-
-
Hobbie, E.A.1
Jumpponen, A.2
Trappe, J.3
-
45
-
-
34547626761
-
A comparison of taxon co-occurrence patterns for macro-and microorganisms
-
Horner-Devine, M. C., Silver, J., Bohannan, B. J. M., Colwell, R. K., Fuhrman, J. A., Green, J. L., Kuske, C. R., Martiny, J. B. H., Muyzer, G., Naeem, S., Øvreås, L., Reysenbach, A.-L., and Smith, V. H. (2007). A comparison of taxon co-occurrence patterns for macro-and microorganisms. Ecology 88, 1345-1353.
-
(2007)
Ecology
, vol.88
, pp. 1345-1353
-
-
Horner-Devine, M.C.1
Silver, J.2
Bohannan, B.J.M.3
Colwell, R.K.4
Fuhrman, J.A.5
Green, J.L.6
Kuske, C.R.7
Martiny, J.B.H.8
Muyzer, G.9
Naeem, S.10
Øvreås, L.11
Reysenbach, A.-L.12
Smith, V.H.13
-
46
-
-
78650142323
-
Biogeography and habitat modelling of high-alpine bacteria
-
King, A. J., Freeman, K. R., McCormick, K. F., Lynch, R. C., Lozupone, C., Knight, R., and Schmidt, S. K. (2010). Biogeography and habitat modelling of high-alpine bacteria. Nat. Commun. 1, 53.
-
(2010)
Nat. Commun.
, vol.1
, pp. 53
-
-
King, A.J.1
Freeman, K.R.2
McCormick, K.F.3
Lynch, R.C.4
Lozupone, C.5
Knight, R.6
Schmidt, S.K.7
-
47
-
-
51549103251
-
High levels of microbial biomass and activity in unvegetated tropic and temperate alpine soils
-
King, A. J., Meyer, A. F., and Schmidt, S. K. (2008). High levels of microbial biomass and activity in unvegetated tropic and temperate alpine soils. Soil Biol. Biochem. 40, 2605-2610.
-
(2008)
Soil Biol. Biochem.
, vol.40
, pp. 2605-2610
-
-
King, A.J.1
Meyer, A.F.2
Schmidt, S.K.3
-
48
-
-
84455170926
-
Bacterial community structure and function change in association with colonizer plants during early primary succession in a glacier forefield
-
Knelman, J. E., Legg, T. M., O'Neill, S. P., Washenberger, C. L., González, A., Cleveland, C. C., and Nemergut, D. R. (2012). Bacterial community structure and function change in association with colonizer plants during early primary succession in a glacier forefield. Soil Biol. Biochem. 46, 172-180.
-
(2012)
Soil Biol. Biochem.
, vol.46
, pp. 172-180
-
-
Knelman, J.E.1
Legg, T.M.2
O'Neill, S.P.3
Washenberger, C.L.4
González, A.5
Cleveland, C.C.6
Nemergut, D.R.7
-
49
-
-
36248950165
-
The use of "altitude" in ecological research
-
Körner, C. (2007). The use of "altitude" in ecological research. Trends Ecol. Evol. (Amst.) 22, 569-574.
-
(2007)
Trends Ecol. Evol. (Amst.)
, vol.22
, pp. 569-574
-
-
Körner, C.1
-
50
-
-
73349090526
-
Deleterious rhizobacteria
-
S. Gnanamanickam (Dordrecht: Springer)
-
Kremer, R. J. (2006). "Deleterious rhizobacteria," in Plant-Associated Bacteria, ed. S. Gnanamanickam (Dordrecht: Springer), 335-357.
-
(2006)
Plant-Associated Bacteria
, pp. 335-357
-
-
Kremer, R.J.1
-
51
-
-
33745963391
-
Dominance of Lysobacter sp. in the rhizosphere of two coastal sand dune plant species, Calystegia soldanella and Elymus mollis.
-
Lee, M. S., Do, J. O., Park, M. S., Jung, S., Lee, K. H., Bae, K. S., Park, S. J., and Kim,S. B. (2006). Dominance of Lysobacter sp. in the rhizosphere of two coastal sand dune plant species, Calystegia soldanella and Elymus mollis. Antonie van Leeuwenhoek 90, 19-27.
-
(2006)
Antonie van Leeuwenhoek
, vol.90
, pp. 19-27
-
-
Lee, M.S.1
Do, J.O.2
Park, M.S.3
Jung, S.4
Lee, K.H.5
Bae, K.S.6
Park, S.J.7
Kim, S.B.8
-
52
-
-
1842657362
-
Microbial population dynamics in an extreme environment: controlling factors in talus soils at 3750 m in the Colorado Rocky Mountains
-
Ley,R. E.,Williams,M.W.,and Schmidt, S. K. (2004). Microbial population dynamics in an extreme environment: controlling factors in talus soils at 3750 m in the Colorado Rocky Mountains. Biogeochemistry 68, 313-335.
-
(2004)
Biogeochemistry
, vol.68
, pp. 313-335
-
-
Ley, R.E.1
Williams, M.W.2
Schmidt, S.K.3
-
53
-
-
33748184092
-
Growth response of weed and crop seedlings to deleterious rhizobacteria
-
Li, J., and Kremer, R. J. (2006). Growth response of weed and crop seedlings to deleterious rhizobacteria. Biol. Contr. 39, 58-65.
-
(2006)
Biol. Contr.
, vol.39
, pp. 58-65
-
-
Li, J.1
Kremer, R.J.2
-
54
-
-
0032903511
-
Ecto-mycorrhizal transfer of amino acid-nitrogen to the alpine sedge Kobresia myosuroides
-
Lipson, D. A., Schadt, C. W., Schmidt, S. K., and Monson, R. K. (2002). Ectomycorrhizal transfer of amino acid-nitrogen to the alpine sedge Kobresia myosuroides. New Phytologist 142, 163-167.
-
(2002)
New Phytologist
, vol.142
, pp. 163-167
-
-
Lipson, D.A.1
Schadt, C.W.2
Schmidt, S.K.3
Monson, R.K.4
-
55
-
-
48349113287
-
Topographic controls on snow distribution, soil moisture, and species diversity of herbaceous alpine vegetation, Niwot Ridge Colorado
-
doi:10.1029/2007JG000419
-
Litaor, M. I., Williams, M., and Seastedt, T. R. (2008). Topographic controls on snow distribution, soil moisture, and species diversity of herbaceous alpine vegetation, Niwot Ridge, Colorado. J. Geophys. Res. 113, G02008. doi:10.1029/2007JG000419
-
(2008)
J. Geophys. Res.
, vol.113
-
-
Litaor, M.I.1
Williams, M.2
Seastedt, T.R.3
-
57
-
-
84887608067
-
Anoxygenic phototrophic bacteria from extreme environments
-
Madigan, M. T. (2005). Anoxygenic phototrophic bacteria from extreme environments. Discov. Photosynth. 20, 969-983.
-
(2005)
Discov. Photosynth.
, vol.20
, pp. 969-983
-
-
Madigan, M.T.1
-
58
-
-
0030733249
-
Temporal changes in the bacterial communities of soil, rhizosphere, and endorhiza associated with fieldgrown cucumber (Cucumis sativus L )
-
Mahaffee, W. F., and Kloepper, J. W. (1997). Temporal changes in the bacterial communities of soil, rhizosphere, and endorhiza associated with field-grown cucumber (Cucumis sativus L.). Microb. Ecol. 34, 210-223.
-
(1997)
Microb. Ecol.
, vol.34
, pp. 210-223
-
-
Mahaffee, W.F.1
Kloepper, J.W.2
-
59
-
-
34547540925
-
Dissecting biological "darkmatter"withsingle-cellgenetic analysis of rare and uncultivated TM7 microbes from the human mouth
-
Marcy, Y., Ouverney, C., Bik, E. M., Lösekann, T., Ivanova, N., Martin, H. G., Szeto, E., Platt, D., Hugenholtz, P., Relman, D. A., and Quake, S. R. (2007). Dissecting biological "darkmatter"withsingle-cellgenetic analysis of rare and uncultivated TM7 microbes from the human mouth. Proc. Natl. Acad. Sci. U.S.A. 104, 11889-11894.
-
(2007)
Proc. Natl. Acad. Sci. U.S.A.
, vol.104
, pp. 11889-11894
-
-
Marcy, Y.1
Ouverney, C.2
Bik, E.M.3
Lösekann, T.4
Ivanova, N.5
Martin, H.G.6
Szeto, E.7
Platt, D.8
Hugenholtz, P.9
Relman, D.A.10
Quake, S.R.11
-
60
-
-
33846597007
-
A virus in a fungus in a plant -three way symbiosis required for thermal tolerance
-
Márquez, L. M., Redman, R. S., Rodriguez, R. J., and Roossinck, M. J. (2007). A virus in a fungus in a plant -three way symbiosis required for thermal tolerance. Science 315, 513-515.
-
(2007)
Science
, vol.315
, pp. 513-515
-
-
Márquez, L.M.1
Redman, R.S.2
Rodriguez, R.J.3
Roossinck, M.J.4
-
61
-
-
31544448331
-
Microbial biogeography: putting microorganisms on the map
-
Martiny, J. B., Bohannan, B. J. M., Brown, J. H., Colwell, R., Fuhrman, J., Green, J., Horner-Devine, M., Kane, M., Krumins, J., Kuske, C., Morin, P., Naeem, S., Ovreas, L., Reysenbach, A., Smith, V., and Staley, J. (2006). Microbial biogeography: putting microorganisms on the map. Nat. Rev. Microbiol. 4, 102-112.
-
(2006)
Nat. Rev. Microbiol.
, vol.4
, pp. 102-112
-
-
Martiny, J.B.1
Bohannan, B.J.M.2
Brown, J.H.3
Colwell, R.4
Fuhrman, J.5
Green, J.6
Horner-Devine, M.7
Kane, M.8
Krumins, J.9
Kuske, C.10
Morin, P.11
Naeem, S.12
Ovreas, L.13
Reysenbach, A.14
Smith, V.15
Staley, J.16
-
63
-
-
0031803494
-
Nitrogen uptake during snowmelt by the snow buttercup
-
Mullen, R. B., Schmidt, S. K., and Jaeger, C. H. (1998). Nitrogen uptake during snowmelt by the snow buttercup, Ranunculus adoneus. Arct. Antarct. Alp. Res. 30, 121-125.
-
(1998)
Ranunculus adoneus. Arct. Antarct. Alp. Res.
, vol.30
, pp. 121-125
-
-
Mullen, R.B.1
Schmidt, S.K.2
Jaeger, C.H.3
-
64
-
-
33846689859
-
Microbial community succession in an unvegetated, recently deglaciated soil
-
Nemergut, D. R., Anderson, S. P., Cleveland, C. C., Martin, A. P., Miller, A. E., Seimon, A., and Schmidt,S. K. (2007). Microbial community succession in an unvegetated, recently deglaciated soil. Microb. Ecol. 53, 110-122.
-
(2007)
Microb. Ecol.
, vol.53
, pp. 110-122
-
-
Nemergut, D.R.1
Anderson, S.P.2
Cleveland, C.C.3
Martin, A.P.4
Miller, A.E.5
Seimon, A.6
Schmidt, S.K.7
-
65
-
-
24144447869
-
Structure andfunctionof Alpineand Arctic soil microbial communities
-
Nemergut, D. R., Costello, E. K., Meyer, A. F., Pescador, M. Y., Weintraub, M. N., and Schmidt, S. K. (2005). Structure andfunctionof Alpineand Arctic soil microbial communities. Res. Microbiol. 156, 775-784.
-
(2005)
Res. Microbiol.
, vol.156
, pp. 775-784
-
-
Nemergut, D.R.1
Costello, E.K.2
Meyer, A.F.3
Pescador, M.Y.4
Weintraub, M.N.5
Schmidt, S.K.6
-
66
-
-
79952249612
-
Autotrophic, sulfur-oxidizing actinobacteria in acidic environments
-
Norris, P. R., Davis-Belmar, C. S., Brown, C. F., and Calvo-Bado, L. A. (2011). Autotrophic, sulfur-oxidizing actinobacteria in acidic environments. Extremophiles 15, 155-163.
-
(2011)
Extremophiles
, vol.15
, pp. 155-163
-
-
Norris, P.R.1
Davis-Belmar, C.S.2
Brown, C.F.3
Calvo-Bado, L.A.4
-
67
-
-
70349255569
-
-
R package version 1
-
Oksanen, J., Blanchet, F. G., Kindt, R., Legendre, P., O'Hara, R. B.,Simpson, G. L., Solymos, P., Stevens, M. H. H., and Wagner, H. (2010). vegan: Community Ecology Package. R package version 1.17-13.
-
(2010)
vegan: Community Ecology Package
, pp. 17-13
-
-
Oksanen, J.1
Blanchet, F.G.2
Kindt, R.3
Legendre, P.4
O'Hara, R.B.5
Simpson, G.L.6
Solymos, P.7
Stevens, M.H.H.8
Wagner, H.9
-
68
-
-
84555175548
-
Carbon balance of Arctic tundra under increased snow cover mediated by a plant pathogen
-
Olofsson, J., Ericson, L., Torp, M., Stark, S., and Baxter, R. (2011). Carbon balance of Arctic tundra under increased snow cover mediated by a plant pathogen. Nat. Clim. Chang. 1, 220-223.
-
(2011)
Nat. Clim. Chang.
, vol.1
, pp. 220-223
-
-
Olofsson, J.1
Ericson, L.2
Torp, M.3
Stark, S.4
Baxter, R.5
-
69
-
-
84867147832
-
Abundant and diverse endophytic Actinobacteria associated with medicinal plant Maytenus austroyunnanensis in Xishuang-banna tropical rainforest revealed by culture-dependent and culture-independent methods
-
doi:10.1111/j.1758-2229.2012.00357.x
-
Qin, S., Chen, H., Zhao, G., Li, J., Zhu, W., Xu, L., Jiang, J., and Li, W. (2012). Abundant and diverse endophytic Actinobacteria associated with medicinal plant Maytenus austroyunnanensis in Xishuang-banna tropical rainforest revealed by culture-dependent and culture-independent methods. Environ. Microbiol. Rep. doi:10.1111/j.1758-2229.2012.00357.x
-
(2012)
Environ. Microbiol. Rep.
-
-
Qin, S.1
Chen, H.2
Zhao, G.3
Li, J.4
Zhu, W.5
Xu, L.6
Jiang, J.7
Li, W.8
-
71
-
-
0031744640
-
Pseudonocardia asaccharolyt-ica sp. nov. and Pseudonocardia sulfidoxydans sp. nov., two new dimethyl disulfide-degrading actin-omycetes and emended description of the genus Pseudonocardia
-
Reichert, K., Lipski, A., Pradella, S., Stakebrandt, E., and Altendorf, K. (1998). Pseudonocardia asaccharolytica sp. nov. and Pseudonocardia sulfidoxydans sp. nov., two new dimethyl disulfide-degrading actin-omycetes and emended description of the genus Pseudonocardia. Int. J. Syst. Evol. Microbiol. 48, 441-449.
-
(1998)
Int. J. Syst. Evol. Microbiol.
, vol.48
, pp. 441-449
-
-
Reichert, K.1
Lipski, A.2
Pradella, S.3
Stakebrandt, E.4
Altendorf, K.5
-
72
-
-
0344364587
-
Grassroots ecology: plant-microbe-soil interactions as drivers of plant community structure and dynamics
-
Reynolds, H. L., Packer, A., Bever, J. D., and Clay, K. (2003). Grassroots ecology: plant-microbe-soil interactions as drivers of plant community structure and dynamics. Ecology 84, 2281-2291.
-
(2003)
Ecology
, vol.84
, pp. 2281-2291
-
-
Reynolds, H.L.1
Packer, A.2
Bever, J.D.3
Clay, K.4
-
73
-
-
79953183928
-
A review on the taxonomy and possible screening traits of plant growth promoting rhizobacteria
-
Chap. 4, eds I. Ahmad, J. Pichtel, and S. Hayat (Weinheim: Whiley-VCH)
-
Rodrigues-Diaz, M., Rodelas-Gonzales, B., Pozo-Clemente, C., Martinez-Toled, M. V., and Gonzalez-Lopez, J. (2008). "A review on the taxonomy and possible screening traits of plant growth promoting rhizobacteria," in Plant-Bacteria Interactions: Strategies and Techniques to Promote Plant Growth, Chap. 4, eds I. Ahmad, J. Pichtel, and S. Hayat (Weinheim: Whiley-VCH), 55-80.
-
(2008)
Plant-Bacteria Interactions: Strategies and Techniques to Promote Plant Growth
, pp. 55-80
-
-
Rodrigues-Diaz, M.1
Rodelas-Gonzales, B.2
Pozo-Clemente, C.3
Martinez-Toled, M.V.4
Gonzalez-Lopez, J.5
-
74
-
-
33749824905
-
Local similarity analysis reveals unique associations among marine bacterioplankton species and environmental factors
-
Ruan, Q., Dutta, D., Schwalbach, M. S., Steele, J. A., Fuhrman, J. A., and Sun, F. (2006). Local similarity analysis reveals unique associations among marine bacterioplankton species and environmental factors. Bioinformatics 22, 2532.
-
(2006)
Bioinformatics
, vol.22
, pp. 2532
-
-
Ruan, Q.1
Dutta, D.2
Schwalbach, M.S.3
Steele, J.A.4
Fuhrman, J.A.5
Sun, F.6
-
75
-
-
84860250539
-
There are many ways to be a mutualist: endophytic fungus reduces plant survival but increases population growth
-
Rudgers, J. A., Miller, T. E. X., Ziegler, S. M., and Craven, K. D. (2012). There are many ways to be a mutualist: endophytic fungus reduces plant survival but increases population growth. Ecology 93, 565-574.
-
(2012)
Ecology
, vol.93
, pp. 565-574
-
-
Rudgers, J.A.1
Miller, T.E.X.2
Ziegler, S.M.3
Craven, K.D.4
-
76
-
-
53549122994
-
Mycorrhizal and dark-septate fungi in plant roots above 4270 meters elevation in the Andes and Rocky mountains
-
Schmidt, S. K., Kageyama, S. A., Halloy, S. R. P., and Schadt, C. W. (2008a). Mycorrhizal and dark-septate fungi in plant roots above 4270 meters elevation in the Andes and Rocky mountains. Arct. Antarct. Alp. Res. 40, 576-583.
-
(2008)
Arct. Antarct. Alp. Res.
, vol.40
, pp. 576-583
-
-
Schmidt, S.K.1
Kageyama, S.A.2
Halloy, S.R.P.3
Schadt, C.W.4
-
77
-
-
57349130530
-
The earliest stages of ecosystem succession in high-elevation (5000 m.a.s.l.), recently de-glaciated soils
-
Schmidt, S. K., Reed, S. C., Nemergut, D. R., Grandy, A. S., Cleveland, C. C., Costello, E. K., Weintraub, M. N., Martin,A. P., and Neff, J. C. (2008b). The earliest stages of ecosystem succession in high-elevation (5000 m.a.s.l.), recently de-glaciated soils. Philos. Trans. R. Soc. Lond. B Biol. Sci. 275, 2793-2802.
-
(2008)
Philos. Trans. R. Soc. Lond. B Biol. Sci.
, vol.275
, pp. 2793-2802
-
-
Schmidt, S.K.1
Reed, S.C.2
Nemergut, D.R.3
Grandy, A.S.4
Cleveland, C.C.5
Costello, E.K.6
Weintraub, M.N.7
Martin, A.P.8
Neff, J.C.9
-
78
-
-
0035096253
-
Plant species richness, productivity, and nitrogen and phosphorus limitations across a snowpack gradient in alpine tundra, Colorado
-
Seastedt, T. R., and Vaccaro, L. (2001). Plant species richness, productivity, and nitrogen and phosphorus limitations across a snowpack gradient in alpine tundra, Colorado, U.S.A. Arct. Antarct. Alp. Res. 33, 100-106.
-
(2001)
U.S.A. Arct. Antarct. Alp. Res.
, vol.33
, pp. 100-106
-
-
Seastedt, T.R.1
Vaccaro, L.2
-
79
-
-
70350399466
-
Low Frankia inoculation potentials in primary successional sites at Mount St. Helens, Washington
-
Seeds, J. D., and Bishop, J. G. (2009). Low Frankia inoculation potentials in primary successional sites at Mount St. Helens, Washington, USA. Plant Soil 323, 225-233.
-
(2009)
USA. Plant Soil
, vol.323
, pp. 225-233
-
-
Seeds, J.D.1
Bishop, J.G.2
-
80
-
-
79954442061
-
Analysis of the composition and characteristics of culturable Endophytic bacteria within subnival plants of the Tianshan mountains, North-western China.
-
Sheng, H. M., Gao, H. S., Xue, L. G., Ding, S., Song, C. L., Feng, H. Y., and An, L. Z. (2010). Analysis of the composition and characteristics of culturable Endophytic bacteria within subnival plants of the Tianshan mountains, North-western China. Curr. Microbiol. 62, 923-932.
-
(2010)
Curr. Microbiol.
, vol.62
, pp. 923-932
-
-
Sheng, H.M.1
Gao, H.S.2
Xue, L.G.3
Ding, S.4
Song, C.L.5
Feng, H.Y.6
An, L.Z.7
-
81
-
-
27444438277
-
Bacterial diversity in the rhizosphere of Proteaceae species
-
Stafford, W. H. L., Baker, G. C., Brown, S. A., Burton, S. G., and Cowan, D. A. (2005). Bacterial diversity in the rhizosphere of Proteaceae species. Environ. Microbiol. 7, 1755-1768.
-
(2005)
Environ. Microbiol.
, vol.7
, pp. 1755-1768
-
-
Stafford, W.H.L.1
Baker, G.C.2
Brown, S.A.3
Burton, S.G.4
Cowan, D.A.5
-
82
-
-
22144446822
-
Plant succession and rhizosphere microbial communities in a recently deglaciated alpine terrain
-
Tscherko, D., Hammesfahr, U., Zeltner, G., Kandeler, E., and Böcker, R. (2005). Plant succession and rhizosphere microbial communities in a recently deglaciated alpine terrain. Basic Appl. Ecol. 6, 367-383.
-
(2005)
Basic Appl. Ecol.
, vol.6
, pp. 367-383
-
-
Tscherko, D.1
Hammesfahr, U.2
Zeltner, G.3
Kandeler, E.4
Böcker, R.5
-
83
-
-
38649142473
-
The unseen majority: soil microbes as drivers of plant diversity and productivity in terrestrial ecosystems
-
van der Heijden, M. G. A., Bardgett, R. D., and Straalen, N. M. V. (2008). The unseen majority: soil microbes as drivers of plant diversity and productivity in terrestrial ecosystems. Ecol. Lett. 11, 296-310.
-
(2008)
Ecol. Lett.
, vol.11
, pp. 296-310
-
-
Van Der Heijden, M.G.A.1
Bardgett, R.D.2
Straalen, N.M.V.3
-
84
-
-
33747619162
-
Ecosystem productivity can be predicted from potential relative growth rate and species abundance
-
Vile, D., Shipely, B., and Garnier, E. (2006). Ecosystem productivity can be predicted from potential relative growth rate and species abundance. Ecol. Lett. 9, 1061-1067.
-
(2006)
Ecol. Lett.
, vol.9
, pp. 1061-1067
-
-
Vile, D.1
Shipely, B.2
Garnier, E.3
-
86
-
-
33746080839
-
Phylogenetic distribution and evolution of mycorrhizas in land plants
-
Wang, B., and Qiu, Y.-L. (2006). Phylogenetic distribution and evolution of mycorrhizas in land plants. Mycorrhiza 16, 299-363.
-
(2006)
Mycorrhiza
, vol.16
, pp. 299-363
-
-
Wang, B.1
Qiu, Y.-L.2
-
87
-
-
34548293679
-
Naïve Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
-
Wang, Q, Garrity, G. M., Tiedje, J. M., and Cole, J. R. (2007). Naïve Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Appl. Environ. Microbiol. 73, 5261-5267.
-
(2007)
Appl. Environ. Microbiol.
, vol.73
, pp. 5261-5267
-
-
Wang, Q.1
Garrity, G.M.2
Tiedje, J.M.3
Cole, J.R.4
-
88
-
-
77955251806
-
Distribution and diversity of carbon monoxide-oxidizing bacteria and bulk bacterial communities across a succession gradient on a Hawaiian volcanic deposit
-
Webber, C. F., and King, G. M. (2010). Distribution and diversity of carbon monoxide-oxidizing bacteria and bulk bacterial communities across a succession gradient on a Hawaiian volcanic deposit. Environ. Microbiol. 12, 1855-1867.
-
(2010)
Environ. Microbiol.
, vol.12
, pp. 1855-1867
-
-
Webber, C.F.1
King, G.M.2
-
90
-
-
0028980546
-
The assembly of experimental wetland plant communities
-
Weiher, E., and Keddy, P. A. (1995). The assembly of experimental wetland plant communities. Oikos 73, 323-335.
-
(1995)
Oikos
, vol.73
, pp. 323-335
-
-
Weiher, E.1
Keddy, P.A.2
-
91
-
-
79955931964
-
Contrasting diversity patterns of crenarchaeal, bacterial and fungal soil communities in an alpine landscape
-
doi:10.1371/journal.pone.0019950
-
Zinger, L., Lejon, D. P. H., Baptist, F., Bouasria, A., Aubert, S., Geremia, R. a., and Choler, P. (2011). Contrasting diversity patterns of crenarchaeal, bacterial and fungal soil communities in an alpine landscape. PLoS ONE 6, e19950. doi:10.1371/journal.pone.0019950
-
(2011)
PLoS ONE
, vol.6
-
-
Zinger, L.1
Lejon, D.P.H.2
Baptist, F.3
Bouasria, A.4
Aubert, S.5
Geremia, R.A.6
Choler, P.7
|