메뉴 건너뛰기




Volumn 34, Issue 3, 1997, Pages 210-223

Temporal changes in the bacterial communities of soil, rhizosphere, and endorhiza associated with field-grown cucumber (Cucumis sativus L.)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL COMMUNITY; COMMUNITY STRUCTURE; CUCUMBER; ENDORHIZA; RHIZOSPHERE; SOIL; TEMPORAL CHANGE;

EID: 0030733249     PISSN: 00953628     EISSN: None     Source Type: Journal    
DOI: 10.1007/s002489900050     Document Type: Article
Times cited : (214)

References (56)
  • 2
    • 0026635980 scopus 로고
    • Evaluation of EPA's rapid bioassessment benthic metrics: Metric redundancy and variability among reference streams sites
    • Barbour MT, Plafkin JL, Bradley BP, Graves CG, Wisseman RW (1992) Evaluation of EPA's rapid bioassessment benthic metrics: metric redundancy and variability among reference streams sites. Environ Toxicol Chem 11:437-449
    • (1992) Environ Toxicol Chem , vol.11 , pp. 437-449
    • Barbour, M.T.1    Plafkin, J.L.2    Bradley, B.P.3    Graves, C.G.4    Wisseman, R.W.5
  • 3
    • 0003262189 scopus 로고
    • Effects of naturally occurring aromatic compounds on bacterial populations in soil
    • Bauske EM, Kloepper JW, Rodríguez-Kábana R (1993) Effects of naturally occurring aromatic compounds on bacterial populations in soil (abstract). Phytopathology 83:1418
    • (1993) Phytopathology , vol.83 , pp. 1418
    • Bauske, E.M.1    Kloepper, J.W.2    Rodríguez-Kábana, R.3
  • 4
    • 0002410965 scopus 로고
    • Population dynamics and rhizosphere interactions
    • Lynch JM (ed) John Wiley & Sons, New York
    • Bazin MJ, Markham P, Scott EM, Lynch JM (1990) Population dynamics and rhizosphere interactions. In: Lynch JM (ed) The rhizosphere. John Wiley & Sons, New York, pp 99-128
    • (1990) The Rhizosphere , pp. 99-128
    • Bazin, M.J.1    Markham, P.2    Scott, E.M.3    Lynch, J.M.4
  • 5
    • 0027338698 scopus 로고
    • Effect of organic matter decomposition level on bacterial species diversity and composition in relationship to pythium damping-off severity
    • Boehm MJ, Madden LV, Hoitink HAJ (1993) Effect of organic matter decomposition level on bacterial species diversity and composition in relationship to pythium damping-off severity. Appl Environ Microbiol 59:4171-4179
    • (1993) Appl Environ Microbiol , vol.59 , pp. 4171-4179
    • Boehm, M.J.1    Madden, L.V.2    Hoitink, H.A.J.3
  • 8
    • 0017717248 scopus 로고
    • Comparison of community similarity indexes
    • Brock DA (1977) Comparison of community similarity indexes. J Water Pollut Control Fed 49:2488-2494
    • (1977) J Water Pollut Control Fed , vol.49 , pp. 2488-2494
    • Brock, D.A.1
  • 10
    • 0028985499 scopus 로고
    • Metabolic profiling as a means of characterizing plant-associated microbial communities
    • Ellis RJ, Thompson IP, Bailey MJ (1995) Metabolic profiling as a means of characterizing plant-associated microbial communities. FEMS Microb Ecol 16:9-18
    • (1995) FEMS Microb Ecol , vol.16 , pp. 9-18
    • Ellis, R.J.1    Thompson, I.P.2    Bailey, M.J.3
  • 11
    • 0000925723 scopus 로고
    • Plant surfaces and bacterial growth: The rhizosphere and rhizoplane
    • Mount MS, Lacy GH (eds) Academic Press, New York
    • Foster RC, Bowen GD (1982) Plant surfaces and bacterial growth: the rhizosphere and rhizoplane. In: Mount MS, Lacy GH (eds) Phytopathogenic prokaryotes, vol 1. Academic Press, New York, pp 159-185
    • (1982) Phytopathogenic Prokaryotes , vol.1 , pp. 159-185
    • Foster, R.C.1    Bowen, G.D.2
  • 12
  • 14
    • 0019982478 scopus 로고
    • Identity and behavior of xylem-residing bacteria in rough lemon roots of Florida citrus trees
    • Gardner JM, Feldmen AW, Zaplotowicz RM (1982) Identity and behavior of xylem-residing bacteria in rough lemon roots of Florida citrus trees. Appl Environ Microbiol 43:1335-1342
    • (1982) Appl Environ Microbiol , vol.43 , pp. 1335-1342
    • Gardner, J.M.1    Feldmen, A.W.2    Zaplotowicz, R.M.3
  • 15
    • 0027371390 scopus 로고
    • Effects of an introduced bacterium on bacterial communities on roots
    • Gilbert GS, Parke JL, Clayton MK, Handelsman J (1993) Effects of an introduced bacterium on bacterial communities on roots. Ecology 74:840-854
    • (1993) Ecology , vol.74 , pp. 840-854
    • Gilbert, G.S.1    Parke, J.L.2    Clayton, M.K.3    Handelsman, J.4
  • 16
    • 0028965663 scopus 로고
    • Analysis of factors affecting the accuracy, reproducibility, and interpretation of microbial community carbon source utilization patterns
    • Haack SK, Garchow H, Klug MJ, Forney LJ (1995) Analysis of factors affecting the accuracy, reproducibility, and interpretation of microbial community carbon source utilization patterns. Appl Environ Microbiol 61:1458-1468
    • (1995) Appl Environ Microbiol , vol.61 , pp. 1458-1468
    • Haack, S.K.1    Garchow, H.2    Klug, M.J.3    Forney, L.J.4
  • 17
    • 0026312721 scopus 로고
    • Dynamics of the microbial populations of a reclaimed-polder soil under a conventional and reduced-input farming system
    • Hassink J, Oude Voshaar JH, Nijhuis EH, van Veen JA (1991) Dynamics of the microbial populations of a reclaimed-polder soil under a conventional and reduced-input farming system. Soil Biol Biochem 23:515-524
    • (1991) Soil Biol Biochem , vol.23 , pp. 515-524
    • Hassink, J.1    Oude Voshaar, J.H.2    Nijhuis, E.H.3    Van Veen, J.A.4
  • 18
    • 0000006498 scopus 로고
    • Diversity and evenness: A unifying notation and its consequences
    • Hill MO (1973) Diversity and evenness: a unifying notation and its consequences. Ecology 54:427-432
    • (1973) Ecology , vol.54 , pp. 427-432
    • Hill, M.O.1
  • 19
    • 0002745563 scopus 로고
    • Über neuere erfahrungen und problem auf dem gebeit der bodenbakteriologie und unter besonder berucksichtigung der grundungung und brache
    • Hiltner L (1904) Über neuere erfahrungen und problem auf dem gebeit der bodenbakteriologie und unter besonder berucksichtigung der grundungung und brache. Arb Dtsch Landwirt Ges 98:59-78
    • (1904) Arb Dtsch Landwirt Ges , vol.98 , pp. 59-78
    • Hiltner, L.1
  • 20
    • 0000321467 scopus 로고
    • Bacteria in healthy potato tissue
    • Hollis JP (1951) Bacteria in healthy potato tissue. Phytopathology 41:350-366
    • (1951) Phytopathology , vol.41 , pp. 350-366
    • Hollis, J.P.1
  • 21
    • 0000752502 scopus 로고
    • The non-concept of species diversity: A critique and alternative parameters
    • Hulbert SH (1971) The non-concept of species diversity: a critique and alternative parameters. Ecology 52:577-586
    • (1971) Ecology , vol.52 , pp. 577-586
    • Hulbert, S.H.1
  • 22
    • 0027008240 scopus 로고
    • A review of issues related to measuring colonization of plant roots by bacteria
    • Kloepper JW, Beauchamp CJ (1992) A review of issues related to measuring colonization of plant roots by bacteria. Can J Microbiol 38:1212-1232
    • (1992) Can J Microbiol , vol.38 , pp. 1212-1232
    • Kloepper, J.W.1    Beauchamp, C.J.2
  • 23
    • 0028985740 scopus 로고
    • Effect of two plant species, flax (Linum usitatissinum L.) and tomato (Lycopersicon esculentum Mill.), on the diversity of soilborne populations of fluorescent pseudomonads
    • Lemanceau P, Corberand T, Gardan L, Latour X, Laguerre G, Boeufgras J-M, Alabouvette C (1995) Effect of two plant species, flax (Linum usitatissinum L.) and tomato (Lycopersicon esculentum Mill.), on the diversity of soilborne populations of fluorescent pseudomonads. Appl Environ Microbiol 61:1004-1012
    • (1995) Appl Environ Microbiol , vol.61 , pp. 1004-1012
    • Lemanceau, P.1    Corberand, T.2    Gardan, L.3    Latour, X.4    Laguerre, G.5    Boeufgras, J.-M.6    Alabouvette, C.7
  • 24
    • 26844576071 scopus 로고
    • Potential risks of gene amplification by PCR as determined by 16S rDNA analysis of a mixed-culture of strict barophilic bacteria
    • Liesack W, Weyland H, Stachegrandt E (1991) Potential risks of gene amplification by PCR as determined by 16S rDNA analysis of a mixed-culture of strict barophilic bacteria. Microb Ecol 174:5072-5078
    • (1991) Microb Ecol , vol.174 , pp. 5072-5078
    • Liesack, W.1    Weyland, H.2    Stachegrandt, E.3
  • 26
  • 29
    • 8544236256 scopus 로고    scopus 로고
    • Spatial and temporal colonization of Phaseolus vulgaris by the bacterial endophytes Pseudomonas fluorescens strain 89B-27 and Enterobacter asburiae strain JM22
    • submitted
    • Mahaffee WF, van Vuurde JWL, van der Wolf JM, Quadt-Hallmann A, van den Brink M, Kloepper JW (1997) Spatial and temporal colonization of Phaseolus vulgaris by the bacterial endophytes Pseudomonas fluorescens strain 89B-27 and Enterobacter asburiae strain JM22. Phytopathology (submitted)
    • (1997) Phytopathology
    • Mahaffee, W.F.1    Van Vuurde, J.W.L.2    Van Der Wolf, J.M.3    Quadt-Hallmann, A.4    Van Den Brink, M.5    Kloepper, J.W.6
  • 30
    • 0026616612 scopus 로고
    • Genetic and phenotypic diversity of Bacillus polymyxa in soil and in the wheat rhizosphere
    • Mavingui P, Laguerre G, Berge G, Heulin T (1992) Genetic and phenotypic diversity of Bacillus polymyxa in soil and in the wheat rhizosphere. Appl Environ Microbiol 58:1894-1903
    • (1992) Appl Environ Microbiol , vol.58 , pp. 1894-1903
    • Mavingui, P.1    Laguerre, G.2    Berge, G.3    Heulin, T.4
  • 31
    • 0028978068 scopus 로고
    • Survey of indigenous bacterial endophytes from cotton and sweet corn
    • McInroy JA, Kloepper JW (1995) Survey of indigenous bacterial endophytes from cotton and sweet corn. Plant Soil 173: 337-342
    • (1995) Plant Soil , vol.173 , pp. 337-342
    • McInroy, J.A.1    Kloepper, J.W.2
  • 32
    • 0028269319 scopus 로고
    • Quantitative cell lysis of indigenous microorganisms and rapid extraction of microbial DNA from sediment
    • More ML, Herrick JB, Silva MC, Ghiorse WC, Madsen EL (1994) Quantitative cell lysis of indigenous microorganisms and rapid extraction of microbial DNA from sediment. Appl Environ Microbiol 60:1572-1580
    • (1994) Appl Environ Microbiol , vol.60 , pp. 1572-1580
    • More, M.L.1    Herrick, J.B.2    Silva, M.C.3    Ghiorse, W.C.4    Madsen, E.L.5
  • 33
    • 84889298752 scopus 로고
    • Electron microscopical studies of the microflora of roots of sand dune grasses
    • Old KM, Nicolson TH (1975) Electron microscopical studies of the microflora of roots of sand dune grasses. New Phytol 74:51-58
    • (1975) New Phytol , vol.74 , pp. 51-58
    • Old, K.M.1    Nicolson, T.H.2
  • 34
    • 0017979899 scopus 로고
    • Light microscopy observations of tetrazolium-reducing bacteria in the endorhizospheres of maize and other grasses in Brazil
    • Patriquin DG, Döbereiner J (1978) Light microscopy observations of tetrazolium-reducing bacteria in the endorhizospheres of maize and other grasses in Brazil. Can J Microbiol 24:734-742
    • (1978) Can J Microbiol , vol.24 , pp. 734-742
    • Patriquin, D.G.1    Döbereiner, J.2
  • 35
    • 0026954207 scopus 로고
    • Strategy for data analysis in environmental surveys emphasizing the index of Biotic similarity and BIOSIM1
    • Pearson JG, Pinkham CFA (1992) Strategy for data analysis in environmental surveys emphasizing the index of Biotic similarity and BIOSIM1. Water Environ Res 64:901-909
    • (1992) Water Environ Res , vol.64 , pp. 901-909
    • Pearson, J.G.1    Pinkham, C.F.A.2
  • 36
    • 0016947278 scopus 로고
    • Application of a new coefficient of similarity to pollution surveys
    • Pinkham CFA, Pearson JG (1976) Application of a new coefficient of similarity to pollution surveys. J Water Pollut Control Fed 48:717-723
    • (1976) J Water Pollut Control Fed , vol.48 , pp. 717-723
    • Pinkham, C.F.A.1    Pearson, J.G.2
  • 37
    • 0025740131 scopus 로고
    • Recovery of bulk DNA from soil by a rapid, small-scale extraction method
    • Porteous LA, Armstrong JL (1991) Recovery of bulk DNA from soil by a rapid, small-scale extraction method. Curr Microbiol 22:345-348
    • (1991) Curr Microbiol , vol.22 , pp. 345-348
    • Porteous, L.A.1    Armstrong, J.L.2
  • 38
    • 8244257796 scopus 로고
    • Community-level changes in bacterial endophytes of cucumber caused by plant growth-promoting rhizobacteria which induce disease resistance
    • Press CM, Mahaffee WM, Kloepper JW (1995) Community-level changes in bacterial endophytes of cucumber caused by plant growth-promoting rhizobacteria which induce disease resistance (abstract). Phytopathology 85:1154
    • (1995) Phytopathology , vol.85 , pp. 1154
    • Press, C.M.1    Mahaffee, W.M.2    Kloepper, J.W.3
  • 40
    • 3142511456 scopus 로고
    • Location of diazotrophs in the root interior with special attention to the kaller grass association
    • Reinhold B, Hurek T (1988) Location of diazotrophs in the root interior with special attention to the kaller grass association. Plant Soil 110:259-268
    • (1988) Plant Soil , vol.110 , pp. 259-268
    • Reinhold, B.1    Hurek, T.2
  • 41
    • 0024071275 scopus 로고
    • Plant and microbial responses to sorghum-soybean cropping systems and fertility management
    • Roder W, Mason SC, Cleff MD, Doran JW, Kniep KR (1988) Plant and microbial responses to sorghum-soybean cropping systems and fertility management. Soil Sci Soc Am J 52:1337-1342
    • (1988) Soil Sci Soc Am J , vol.52 , pp. 1337-1342
    • Roder, W.1    Mason, S.C.2    Cleff, M.D.3    Doran, J.W.4    Kniep, K.R.5
  • 42
    • 51249168036 scopus 로고
    • Settlement of the diazotrophic, phytoeffective bacterial strain Pantoea agglomerans on and within winter wheat: An investigation using ELISA and transmission electron microscopy
    • Ruppel S, Hecht-Buchholz C, Remus R, Ortmann U, Schmelser R (1992) Settlement of the diazotrophic, phytoeffective bacterial strain Pantoea agglomerans on and within winter wheat: an investigation using ELISA and transmission electron microscopy. Plant Soil 145:261-273
    • (1992) Plant Soil , vol.145 , pp. 261-273
    • Ruppel, S.1    Hecht-Buchholz, C.2    Remus, R.3    Ortmann, U.4    Schmelser, R.5
  • 43
    • 0001876608 scopus 로고
    • Identification of bacteria through fatty acid analysis
    • Klement Z, Rudolph K, Sands DC (eds) Akadèmiai Kiadó, Budapest
    • Sasser M (1990) Identification of bacteria through fatty acid analysis. In: Klement Z, Rudolph K, Sands DC (eds) Methods in phytobacteriology. Akadèmiai Kiadó, Budapest, pp 199-204
    • (1990) Methods in Phytobacteriology , pp. 199-204
    • Sasser, M.1
  • 44
    • 0010446496 scopus 로고
    • Use of rarefraction and related methods in ecology
    • Dickson KL, Cairns J Jr, Livingston RJ (eds) American Society for Testing and Materials, Philadelphia
    • Simberloff D (1978) Use of rarefraction and related methods in ecology. In: Dickson KL, Cairns J Jr, Livingston RJ (eds) Biological data in water pollution assessment: quantitative and statistical analyses. American Society for Testing and Materials, Philadelphia, pp 150-165
    • (1978) Biological Data in Water Pollution Assessment: Quantitative and Statistical Analyses , pp. 150-165
    • Simberloff, D.1
  • 45
    • 0014512937 scopus 로고
    • Soil bacteria: Comparisons of rhizosphere and nonrhizosphere populations
    • Skyring GW, Quadling C (1969) Soil bacteria: comparisons of rhizosphere and nonrhizosphere populations. Can J Microbiol 15:473-488
    • (1969) Can J Microbiol , vol.15 , pp. 473-488
    • Skyring, G.W.1    Quadling, C.2
  • 48
    • 0025256110 scopus 로고
    • Comparison of phenotypic diversity and DNA heterogeneity in a population of soil bacteria
    • Torsvik V, Saite K, Sorheim R, Gohsoyr J (1990) Comparison of phenotypic diversity and DNA heterogeneity in a population of soil bacteria. Appl Environ Microbiol 56:776-781
    • (1990) Appl Environ Microbiol , vol.56 , pp. 776-781
    • Torsvik, V.1    Saite, K.2    Sorheim, R.3    Gohsoyr, J.4
  • 49
    • 0029416556 scopus 로고
    • Carbon source utilization of soil extracted microorganisms as a tool to detect the effects of soil supplemented with genetically engineered and non-engineered Corynebacterium glutamicum and a recombinant peptide at the community level
    • Vahjen W, Munch J-C, Tebbe CC (1995) Carbon source utilization of soil extracted microorganisms as a tool to detect the effects of soil supplemented with genetically engineered and non-engineered Corynebacterium glutamicum and a recombinant peptide at the community level. FEMS Microb Ecol 18: 317-328
    • (1995) FEMS Microb Ecol , vol.18 , pp. 317-328
    • Vahjen, W.1    Munch, J.-C.2    Tebbe, C.C.3
  • 51
    • 0021645069 scopus 로고
    • Diversity, biotic and similarity indices: A review with special reference to aquatic ecosystems
    • Washington HG (1984) Diversity, biotic and similarity indices: a review with special reference to aquatic ecosystems. Water Res 18:653-694
    • (1984) Water Res , vol.18 , pp. 653-694
    • Washington, H.G.1
  • 53
    • 0037863693 scopus 로고    scopus 로고
    • Viable but non-culturable cells in plant-associated bacterial populations
    • Grimes DJ, Colwell RR (eds) Chapman and Hall, (In Press)
    • Wilson M, Lindow SE (1996) Viable but non-culturable cells in plant-associated bacterial populations. In: Grimes DJ, Colwell RR (eds) Non-culturable microorganisms in the environment. Chapman and Hall, (In Press)
    • (1996) Non-culturable Microorganisms in the Environment
    • Wilson, M.1    Lindow, S.E.2
  • 54
    • 0000031549 scopus 로고
    • Microbial density, composition, and diversity in organically and conventionally managed rhizosphere soil in relation to suppression of corky root of tomatoes
    • Workneh F, van Bruggen AHC (1994) Microbial density, composition, and diversity in organically and conventionally managed rhizosphere soil in relation to suppression of corky root of tomatoes. Appl Soil Ecol 1:219-230
    • (1994) Appl Soil Ecol , vol.1 , pp. 219-230
    • Workneh, F.1    Van Bruggen, A.H.C.2
  • 55
    • 0001382482 scopus 로고
    • Variables associated with corky root and phytopthora root rot of tomatoes in organic and conventional farms
    • Workneh F, van Bruggen AHC, Drinkwater LE, Shennan C (1993) Variables associated with corky root and phytopthora root rot of tomatoes in organic and conventional farms. Phytopathology 83:581-589
    • (1993) Phytopathology , vol.83 , pp. 581-589
    • Workneh, F.1    Van Bruggen, A.H.C.2    Drinkwater, L.E.3    Shennan, C.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.