-
1
-
-
32644485836
-
Bactericidal activity of various antibiotics against biofilm-producing Pseudomonas aeruginosa
-
Abdi-Ali, A., Mohammadi-Mehr, M. & Agha Alaei, Y. (2006). Bactericidal activity of various antibiotics against biofilm-producing Pseudomonas aeruginosa. Int J Antimicrob Agents 27, 196-200.
-
(2006)
Int J Antimicrob Agents
, vol.27
, pp. 196-200
-
-
Abdi-Ali, A.1
Mohammadi-Mehr, M.2
Agha Alaei, Y.3
-
2
-
-
53749101273
-
Epidemiology, clinical manifestations, pathogenesis and laboratory detection of Mycoplasma pneumoniae infections
-
Atkinson, T. P., Balish, M. F. & Waites, K. B. (2008). Epidemiology, clinical manifestations, pathogenesis and laboratory detection of Mycoplasma pneumoniae infections. FEMS Microbiol Rev 32, 956- 973.
-
(2008)
FEMS Microbiol Rev
, vol.32
, pp. 956
-
-
Atkinson, T.P.1
Balish, M.F.2
Waites, K.B.3
-
3
-
-
40549120596
-
The RAST Server: Rapid annotations using subsystems technology
-
Aziz, R. K., Bartels, D., Best, A. A., DeJongh, M., Disz, T., Edwards, R. A., Formsma, K., Gerdes, S., Glass, E. M. & other authors (2008). The RAST Server: rapid annotations using subsystems technology. BMC Genomics 9, 75-89.
-
(2008)
BMC Genomics
, vol.9
, pp. 75-89
-
-
Aziz, R.K.1
Bartels, D.2
Best, A.A.3
Dejongh, M.4
Disz, T.5
Edwards, R.A.6
Formsma, K.7
Gerdes, S.8
Glass, E.M.9
-
4
-
-
0037221778
-
Localization of Mycoplasma pneumoniae cytadherence-associated protein HMW2 by fusion with green fluorescent protein: Implications for attachment organelle structure
-
Balish, M. F., Santurri, R. T., Ricci, A. M., Lee, K. K. & Krause, D. C. (2003). Localization of Mycoplasma pneumoniae cytadherence-associated protein HMW2 by fusion with green fluorescent protein: implications for attachment organelle structure. Mol Microbiol 47, 49-60.
-
(2003)
Mol Microbiol
, vol.47
, pp. 49-60
-
-
Balish, M.F.1
Santurri, R.T.2
Ricci, A.M.3
Lee, K.K.4
Krause, D.C.5
-
5
-
-
70350664649
-
De novo transcriptome assembly with ABySS
-
Birol, I., Jackman, S. D., Nielsen, C. B., Qian, J. Q., Varhol, R., Stazyk, G., Morin, R. D., Zhao, Y., Hirst, M. & other authors (2009). De novo transcriptome assembly with ABySS. Bioinformatics 25, 2872- 2877.
-
(2009)
Bioinformatics
, vol.25
, pp. 2872
-
-
Birol, I.1
Jackman, S.D.2
Nielsen, C.B.3
Qian, J.Q.4
Varhol, R.5
Stazyk, G.6
Morin, R.D.7
Zhao, Y.8
Hirst, M.9
-
6
-
-
84863712645
-
Mycoplasma polysaccharide protects against complement
-
Bolland, J. R., Simmons, W. L., Daubenspeck, J. M. & Dybvig, K. (2012). Mycoplasma polysaccharide protects against complement. Microbiology 158, 1867-1873.
-
(2012)
Microbiology
, vol.158
, pp. 1867-1873
-
-
Bolland, J.R.1
Simmons, W.L.2
Daubenspeck, J.M.3
Dybvig, K.4
-
7
-
-
11444270529
-
Biofilms: The matrix revisited
-
Branda, S. S., Vik, S., Friedman, L. & Kolter, R. (2005). Biofilms: the matrix revisited. Trends Microbiol 13, 20-26.
-
(2005)
Trends Microbiol
, vol.13
, pp. 20-26
-
-
Branda, S.S.1
Vik, S.2
Friedman, L.3
Kolter, R.4
-
8
-
-
9244224674
-
Capsule polysaccharide mediates bacterial resistance to antimicrobial peptides
-
Campos, M. A., Vargas, M. A., Regueiro, V., Llompart, C. M., Albertí, S. & Bengoechea, J. A. (2004). Capsule polysaccharide mediates bacterial resistance to antimicrobial peptides. Infect Immun 72, 7107- 7114.
-
(2004)
Infect Immun
, vol.72
, pp. 7107
-
-
Campos, M.A.1
Vargas, M.A.2
Regueiro, V.3
Llompart, C.M.4
Albertí, S.5
Bengoechea, J.A.6
-
9
-
-
0036330857
-
icaR encodes a transcriptional repressor involved in environmental regulation of ica operon expression and biofilm formation in Staphylococcus epidermidis
-
Conlon, K. M., Humphreys, H. & O'Gara, J. P. (2002). icaR encodes a transcriptional repressor involved in environmental regulation of ica operon expression and biofilm formation in Staphylococcus epidermidis. J Bacteriol 184, 4400-4408.
-
(2002)
J Bacteriol
, vol.184
, pp. 4400-4408
-
-
Conlon, K.M.1
Humphreys, H.2
O'Gara, J.P.3
-
10
-
-
0033591467
-
Bacterial biofilms: A common cause of persistent infections
-
Costerton, J. W., Stewart, P. S. & Greenberg, E. P. (1999). Bacterial biofilms: a common cause of persistent infections. Science 284, 1318- 1322.
-
(1999)
Science
, vol.284
, pp. 1318
-
-
Costerton, J.W.1
Stewart, P.S.2
Greenberg, E.P.3
-
11
-
-
33644868597
-
daime,a novel image analysis program for microbial ecology and biofilm research
-
Daims, H., Lücker, S. & Wagner, M. (2006). daime, a novel image analysis program for microbial ecology and biofilm research. Environ Microbiol 8, 200-213.
-
(2006)
Environ Microbiol
, vol.8
, pp. 200-213
-
-
Daims, H.1
Lücker, S.2
Wagner, M.3
-
12
-
-
77956193448
-
progressiveMauve: Multiple genome alignment with gene gain, loss and rearrangement
-
Darling, A. E., Mau, B. & Perna, N. T. (2010). progressiveMauve: multiple genome alignment with gene gain, loss and rearrangement. PLoS ONE 5, e11147.
-
(2010)
PLoS ONE
, vol.5
-
-
Darling, A.E.1
Mau, B.2
Perna, N.T.3
-
13
-
-
65949086032
-
Identification of exopolysaccharide-deficient mutants of Mycoplasma pulmonis
-
Daubenspeck, J. M., Bolland, J. R., Luo, W., Simmons, W. L. & Dybvig, K. (2009). Identification of exopolysaccharide-deficient mutants of Mycoplasma pulmonis. Mol Microbiol 72, 1235-1245.
-
(2009)
Mol Microbiol
, vol.72
, pp. 1235-1245
-
-
Daubenspeck, J.M.1
Bolland, J.R.2
Luo, W.3
Simmons, W.L.4
Dybvig, K.5
-
14
-
-
0023719858
-
Differences in virulence for mice among strains of Mycoplasma pulmonis
-
Davidson, M. K., Lindsey, J. R., Parker, R. F., Tully, J. G. & Cassell, G. H. (1988). Differences in virulence for mice among strains of Mycoplasma pulmonis. Infect Immun 56, 2156-2162.
-
(1988)
Infect Immun
, vol.56
, pp. 2156-2162
-
-
Davidson, M.K.1
Lindsey, J.R.2
Parker, R.F.3
Tully, J.G.4
Cassell, G.H.5
-
15
-
-
0035887796
-
Biofilm formation: A clinically relevant microbiological process
-
Donlan, R. M. (2001). Biofilm formation: a clinically relevant microbiological process. Clin Infect Dis 33, 1387-1392.
-
(2001)
Clin Infect Dis
, vol.33
, pp. 1387-1392
-
-
Donlan, R.M.1
-
16
-
-
54549124772
-
Differences in biofilm development and antibiotic susceptibility among clinical Ureaplasma urealyticum and Ureaplasma parvum isolates
-
García-Castillo, M., Morosini, M.-I., Gálvez, M., Baquero, F., del Campo, R. & Meseguer, M.-A. (2008). Differences in biofilm development and antibiotic susceptibility among clinical Ureaplasma urealyticum and Ureaplasma parvum isolates. J Antimicrob Chemother 62, 1027-1030.
-
(2008)
J Antimicrob Chemother
, vol.62
, pp. 1027-1030
-
-
García-Castillo, M.1
Morosini, M.-I.2
Gálvez, M.3
Baquero, F.4
del Campo, R.5
Meseguer, M.-A.6
-
17
-
-
33748755047
-
Regulatory protein phosphorylation in Mycoplasma pneumoniae. A PP2C-type phosphatase serves to dephosphorylate HPr(Ser-P)
-
Halbedel, S., Busse, J., Schmidl, S. R. & Stülke, J. (2006). Regulatory protein phosphorylation in Mycoplasma pneumoniae. A PP2C-type phosphatase serves to dephosphorylate HPr(Ser-P). J Biol Chem 281, 26253-26259.
-
(2006)
J Biol Chem
, vol.281
, pp. 26253-26259
-
-
Halbedel, S.1
Busse, J.2
Schmidl, S.R.3
Stülke, J.4
-
18
-
-
0025045835
-
The biofilm glycocalyx as a resistance factor
-
Hoyle, B. D., Jass, J. & Costerton, J. W. (1990). The biofilm glycocalyx as a resistance factor. J Antimicrob Chemother 26, 1-5.
-
(1990)
J Antimicrob Chemother
, vol.26
, pp. 1-5
-
-
Hoyle, B.D.1
Jass, J.2
Costerton, J.W.3
-
19
-
-
11144330206
-
Depolymerization of b-1,6-N-acetyl-D-glucosamine disrupts the integrity of diverse bacterial biofilms
-
Itoh, Y., Wang, X., Hinnebusch, B. J., Preston, J. F., III & Romeo, T. (2005). Depolymerization of b-1,6-N-acetyl-D-glucosamine disrupts the integrity of diverse bacterial biofilms. J Bacteriol 187, 382- 387.
-
(2005)
J Bacteriol
, vol.187
, pp. 382
-
-
Itoh, Y.1
Wang, X.2
Hinnebusch, B.J.3
Preston III, J.F.4
Romeo, T.5
-
20
-
-
78649358717
-
Quake: Qualityaware detection and correction of sequencing errors
-
Kelley, D. R., Schatz, M. C. & Salzberg, S. L. (2010). Quake: qualityaware detection and correction of sequencing errors. Genome Biol 11, R116.
-
(2010)
Genome Biol
, vol.11
-
-
Kelley, D.R.1
Schatz, M.C.2
Salzberg, S.L.3
-
21
-
-
82355173278
-
Adhesion and biofilm formation of Mycoplasma pneumoniae on an abiotic surface
-
Kornspan, J. D., Tarshis, M. & Rottem, S. (2011). Adhesion and biofilm formation of Mycoplasma pneumoniae on an abiotic surface. Arch Microbiol 193, 833-836.
-
(2011)
Arch Microbiol
, vol.193
, pp. 833-836
-
-
Kornspan, J.D.1
Tarshis, M.2
Rottem, S.3
-
22
-
-
0031914772
-
Mycoplasma pneumoniae cytadherence: Organization and assembly of the attachment organelle
-
Krause, D. C. (1998). Mycoplasma pneumoniae cytadherence: organization and assembly of the attachment organelle. Trends Microbiol 6, 15-18.
-
(1998)
Trends Microbiol
, vol.6
, pp. 15-18
-
-
Krause, D.C.1
-
23
-
-
25444511795
-
Poly-Nacetylglucosamine production in Staphylococcus aureus is essential for virulence in murine models of systemic infection
-
Kropec, A., Maira-Litran, T., Jefferson, K. K., Grout, M., Cramton, S. E., Götz, F., Goldmann, D. A. & Pier, G. B. (2005). Poly-Nacetylglucosamine production in Staphylococcus aureus is essential for virulence in murine models of systemic infection. Infect Immun 73, 6868-6876.
-
(2005)
Infect Immun
, vol.73
, pp. 6868-6876
-
-
Kropec, A.1
Maira-Litran, T.2
Jefferson, K.K.3
Grout, M.4
Cramton, S.E.5
Götz, F.6
Goldmann, D.A.7
Pier, G.B.8
-
24
-
-
33646410434
-
Towards the identification of the common features of bacterial biofilm development
-
Lasa, I. (2006). Towards the identification of the common features of bacterial biofilm development. Int Microbiol 9, 21-28.
-
(2006)
Int Microbiol
, vol.9
, pp. 21-28
-
-
Lasa, I.1
-
25
-
-
67649884743
-
Fast and accurate short read alignment with Burrows-Wheeler transform
-
Li, H. & Durbin, R. (2009). Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 25, 1754-1760.
-
(2009)
Bioinformatics
, vol.25
, pp. 1754-1760
-
-
Li, H.1
Durbin, R.2
-
26
-
-
33645553754
-
Biofilm formation by mycoplasma species and its role in environmental persistence and survival
-
McAuliffe, L., Ellis, R. J., Miles, K., Ayling, R. D. & Nicholas, R. A. J. (2006). Biofilm formation by mycoplasma species and its role in environmental persistence and survival. Microbiology 152, 913- 922.
-
(2006)
Microbiology
, vol.152
, pp. 913
-
-
McAuliffe, L.1
Ellis, R.J.2
Miles, K.3
Ayling, R.D.4
Nicholas, R.A.J.5
-
27
-
-
37249055056
-
Biofilm formation by enterococci
-
Mohamed, J. A. & Huang, D. B. (2007). Biofilm formation by enterococci. J Med Microbiol 56, 1581-1588.
-
(2007)
J Med Microbiol
, vol.56
, pp. 1581-1588
-
-
Mohamed, J.A.1
Huang, D.B.2
-
28
-
-
42149124506
-
Genomic analysis reveals Mycoplasma pneumoniae repetitive element 1-mediated recombination in a clinical isolate
-
Musatovova, O., Kannan, T. R. & Baseman, J. B. (2008). Genomic analysis reveals Mycoplasma pneumoniae repetitive element 1-mediated recombination in a clinical isolate. Infect Immun 76, 1639-1648.
-
(2008)
Infect Immun
, vol.76
, pp. 1639-1648
-
-
Musatovova, O.1
Kannan, T.R.2
Baseman, J.B.3
-
29
-
-
84867584237
-
Mycoplasma pneumoniae large DNA repetitive elements RepMP1 show type specific organization among strains
-
Musatovova, O., Kannan, T. R. & Baseman, J. B. (2012). Mycoplasma pneumoniae large DNA repetitive elements RepMP1 show type specific organization among strains. PLoS ONE 7, e47625.
-
(2012)
PLoS ONE
, vol.7
-
-
Musatovova, O.1
Kannan, T.R.2
Baseman, J.B.3
-
30
-
-
70350655607
-
ABySS-Explorer: Visualizing genome sequence assemblies
-
Nielsen, C. B., Jackman, S. D., Birol, I. & Jones, S. J. (2009). ABySS-Explorer: visualizing genome sequence assemblies. IEEE Trans Vis Comput Graph 15, 881-888.
-
(2009)
IEEE Trans Vis Comput Graph
, vol.15
, pp. 881-888
-
-
Nielsen, C.B.1
Jackman, S.D.2
Birol, I.3
Jones, S.J.4
-
31
-
-
77952297731
-
Clinical severity of Mycoplasma pneumoniae (MP) infection is associated with bacterial load in oropharyngeal secretions but not with MP genotype
-
Nilsson, A. C., Björkman, P., Welinder-Olsson, C., Widell, A. & Persson, K. (2010). Clinical severity of Mycoplasma pneumoniae (MP) infection is associated with bacterial load in oropharyngeal secretions but not with MP genotype. BMC Infect Dis 10, 39.
-
(2010)
BMC Infect Dis
, vol.10
, pp. 39
-
-
Nilsson, A.C.1
Björkman, P.2
Welinder-Olsson, C.3
Widell, A.4
Persson, K.5
-
32
-
-
0029025535
-
The proline-rich P65 protein of Mycoplasma pneumoniae is a component of the Triton X-100-insoluble fraction and exhibits size polymorphism in the strains M129 and FH
-
Proft, T., Hilbert, H., Layh-Schmitt, G. & Herrmann, R. (1995). The proline-rich P65 protein of Mycoplasma pneumoniae is a component of the Triton X-100-insoluble fraction and exhibits size polymorphism in the strains M129 and FH. J Bacteriol 177, 3370-3378.
-
(1995)
J Bacteriol
, vol.177
, pp. 3370-3378
-
-
Proft, T.1
Hilbert, H.2
Layh-Schmitt, G.3
Herrmann, R.4
-
33
-
-
77951770756
-
BEDTools: A flexible suite of utilities for comparing genomic features
-
Quinlan, A. R. & Hall, I. M. (2010). BEDTools: a flexible suite of utilities for comparing genomic features. Bioinformatics 26, 841- 842.
-
(2010)
Bioinformatics
, vol.26
, pp. 841
-
-
Quinlan, A.R.1
Hall, I.M.2
-
34
-
-
73449134487
-
The stability of cytadherence proteins in Mycoplasma pneumoniae requires activity of the protein kinase PrkC
-
Schmidl, S. R., Gronau, K., Hames, C., Busse, J., Becher, D., Hecker, M. & Stülke, J. (2010). The stability of cytadherence proteins in Mycoplasma pneumoniae requires activity of the protein kinase PrkC. Infect Immun 78, 184-192.
-
(2010)
Infect Immun
, vol.78
, pp. 184-192
-
-
Schmidl, S.R.1
Gronau, K.2
Hames, C.3
Busse, J.4
Becher, D.5
Hecker, M.6
Stülke, J.7
-
35
-
-
0141446123
-
The Vsa proteins modulate susceptibility of Mycoplasma pulmonis to complement killing, hemadsorption, and adherence to polystyrene
-
Simmons, W. L. & Dybvig, K. (2003). The Vsa proteins modulate susceptibility of Mycoplasma pulmonis to complement killing, hemadsorption, and adherence to polystyrene. Infect Immun 71, 5733-5738.
-
(2003)
Infect Immun
, vol.71
, pp. 5733-5738
-
-
Simmons, W.L.1
Dybvig, K.2
-
36
-
-
34547629065
-
Biofilms protect Mycoplasma pulmonis cells from lytic effects of complement and gramicidin
-
Simmons, W. L. & Dybvig, K. (2007). Biofilms protect Mycoplasma pulmonis cells from lytic effects of complement and gramicidin. Infect Immun 75, 3696-3699.
-
(2007)
Infect Immun
, vol.75
, pp. 3696-3699
-
-
Simmons, W.L.1
Dybvig, K.2
-
37
-
-
65449182322
-
Mycoplasma biofilms ex vivo and in vivo
-
Simmons, W. L. & Dybvig, K. (2009). Mycoplasma biofilms ex vivo and in vivo. FEMS Microbiol Lett 295, 77-81.
-
(2009)
FEMS Microbiol Lett
, vol.295
, pp. 77-81
-
-
Simmons, W.L.1
Dybvig, K.2
-
38
-
-
33947396824
-
A stochastic mechanism for biofilm formation by Mycoplasma pulmonis
-
Simmons, W. L., Bolland, J. R., Daubenspeck, J. M. & Dybvig, K. (2007). A stochastic mechanism for biofilm formation by Mycoplasma pulmonis. J Bacteriol 189, 1905-1913.
-
(2007)
J Bacteriol
, vol.189
, pp. 1905-1913
-
-
Simmons, W.L.1
Bolland, J.R.2
Daubenspeck, J.M.3
Dybvig, K.4
-
39
-
-
0023907204
-
Congo red as a fluorochrome for the rapid detection of fungi
-
Slifkin, M. & Cumbie, R. (1988). Congo red as a fluorochrome for the rapid detection of fungi. J Clin Microbiol 26, 827-830.
-
(1988)
J Clin Microbiol
, vol.26
, pp. 827-830
-
-
Slifkin, M.1
Cumbie, R.2
-
40
-
-
69949152267
-
Sequence variations in RepMP2/3 and RepMP4 elements reveal intragenomic homologous DNA recombination events in Mycoplasma pneumoniae
-
Spuesens, E. B. M., Oduber, M., Hoogenboezem, T., Sluijter, M., Hartwig, N. G., van Rossum, A. M. & Vink, C. (2009). Sequence variations in RepMP2/3 and RepMP4 elements reveal intragenomic homologous DNA recombination events in Mycoplasma pneumoniae. Microbiology 155, 2182-2196.
-
(2009)
Microbiology
, vol.155
, pp. 2182-2196
-
-
Spuesens, E.B.M.1
Oduber, M.2
Hoogenboezem, T.3
Sluijter, M.4
Hartwig, N.G.5
van Rossum, A.M.6
Vink, C.7
-
41
-
-
0025375215
-
Sequence divergency of the cytadhesin gene of Mycoplasma pneumoniae
-
Su, C. J., Chavoya, A., Dallo, S. F. & Baseman, J. B. (1990). Sequence divergency of the cytadhesin gene of Mycoplasma pneumoniae. Infect Immun 58, 2669-2674.
-
(1990)
Infect Immun
, vol.58
, pp. 2669-2674
-
-
Su, C.J.1
Chavoya, A.2
Dallo, S.F.3
Baseman, J.B.4
-
42
-
-
0035152224
-
Biofilm exopolysaccharides: A strong and sticky framework
-
Sutherland, I. W. (2001). Biofilm exopolysaccharides: a strong and sticky framework. Microbiology 147, 3-9.
-
(2001)
Microbiology
, vol.147
, pp. 3-9
-
-
Sutherland, I.W.1
-
43
-
-
22544456543
-
Staphylococcus aureus develops an alternative, ica-independent biofilm in the absence of the arlRS twocomponent system
-
Toledo-Arana, A., Merino, N., Vergara-Irigaray, M., Débarbouillé, M., Penadés, J. R. & Lasa, I. (2005). Staphylococcus aureus develops an alternative, ica-independent biofilm in the absence of the arlRS twocomponent system. J Bacteriol 187, 5318-5329.
-
(2005)
J Bacteriol
, vol.187
, pp. 5318-5329
-
-
Toledo-Arana, A.1
Merino, N.2
Vergara-Irigaray, M.3
Débarbouillé, M.4
Penadés, J.R.5
Lasa, I.6
-
44
-
-
0020951070
-
New laboratory techniques for isolation of Mycoplasma pneumoniae
-
Tully, J. G. (1983). New laboratory techniques for isolation of Mycoplasma pneumoniae. Yale J Biol Med 56, 511-515.
-
(1983)
Yale J Biol Med
, vol.56
, pp. 511-515
-
-
Tully, J.G.1
-
45
-
-
0028113957
-
Typing of Mycoplasma pneumoniae by PCRmediated DNA fingerprinting
-
Ursi, D., Ieven, M., van Bever, H., Quint, W., Niesters, H. G. & Goossens, H. (1994). Typing of Mycoplasma pneumoniae by PCRmediated DNA fingerprinting. J Clin Microbiol 32, 2873-2875.
-
(1994)
J Clin Microbiol
, vol.32
, pp. 2873-2875
-
-
Ursi, D.1
Ieven, M.2
van Bever, H.3
Quint, W.4
Niesters, H.G.5
Goossens, H.6
-
46
-
-
68649115596
-
Bacterial extracellular polysaccharides involved in biofilm formation
-
Vu, B., Chen, M., Crawford, R. J. & Ivanova, E. P. (2009). Bacterial extracellular polysaccharides involved in biofilm formation. Molecules 14, 2535-2554.
-
(2009)
Molecules
, vol.14
, pp. 2535-2554
-
-
Vu, B.1
Chen, M.2
Crawford, R.J.3
Ivanova, E.P.4
-
47
-
-
59849114319
-
New insights into the pathogenesis and detection of Mycoplasma pneumoniae infections
-
Waites, K. B., Balish, M. F. & Atkinson, T. P. (2008). New insights into the pathogenesis and detection of Mycoplasma pneumoniae infections. Future Microbiol 3, 635-648.
-
(2008)
Future Microbiol
, vol.3
, pp. 635-648
-
-
Waites, K.B.1
Balish, M.F.2
Atkinson, T.P.3
|