메뉴 건너뛰기




Volumn 76, Issue 4, 2008, Pages 1639-1648

Genomic analysis reveals Mycoplasma pneumoniae repetitive element 1-mediated recombination in a clinical isolate

Author keywords

[No Author keywords available]

Indexed keywords

LEUCINE ZIPPER PROTEIN; BACTERIAL PROTEIN;

EID: 42149124506     PISSN: 00199567     EISSN: None     Source Type: Journal    
DOI: 10.1128/IAI.01621-07     Document Type: Article
Times cited : (16)

References (43)
  • 1
    • 0027534945 scopus 로고
    • Rearrangement of the PAX3 paired box gene in the paediatric solid tumour alveolar rhabdomyosarcoma
    • Barr, F. G., N. Galili, J. Holick, J. A. Biegel, G. Rovera, and B. S. Emanuel. 1993. Rearrangement of the PAX3 paired box gene in the paediatric solid tumour alveolar rhabdomyosarcoma. Nat. Genet. 3:113-117.
    • (1993) Nat. Genet , vol.3 , pp. 113-117
    • Barr, F.G.1    Galili, N.2    Holick, J.3    Biegel, J.A.4    Rovera, G.5    Emanuel, B.S.6
  • 2
    • 0030628417 scopus 로고    scopus 로고
    • Mycoplasmas: Sophisticated, reemerging, and burdened by their notoriety
    • Baseman, J. B., and J. G. Tully. 1997. Mycoplasmas: sophisticated, reemerging, and burdened by their notoriety. Emerg. Infect. Dis. 3:21-32.
    • (1997) Emerg. Infect. Dis , vol.3 , pp. 21-32
    • Baseman, J.B.1    Tully, J.G.2
  • 3
    • 0024968289 scopus 로고
    • Leucine zipper motif extends
    • Buckland, R., and F. Wild. 1989. Leucine zipper motif extends. Nature 338:547.
    • (1989) Nature , vol.338 , pp. 547
    • Buckland, R.1    Wild, F.2
  • 4
    • 0004119940 scopus 로고
    • Analysis of RFLPs of amplified cytadhesin P1 gene for epidemiological study of Mycoplasma pneumoniae
    • Cousin, A., B. de Barbeyrac, A. Charron, H. Renadin, and C. Bebear. 1994. Analysis of RFLPs of amplified cytadhesin P1 gene for epidemiological study of Mycoplasma pneumoniae. IOM Lett. 3:494-495.
    • (1994) IOM Lett , vol.3 , pp. 494-495
    • Cousin, A.1    de Barbeyrac, B.2    Charron, A.3    Renadin, H.4    Bebear, C.5
  • 5
    • 0033983488 scopus 로고    scopus 로고
    • Molecular typing of Mycoplasma pneumoniae strains by PCR-based methods and pulsed-field gel electrophoresis. Application to French and Danish isolates
    • Cousin-Allery, A., A. Charron, B. de Barbeyrac, G. Fremy, J. Skov Jensen, H. Renaudin, and C. Bebear. 2000. Molecular typing of Mycoplasma pneumoniae strains by PCR-based methods and pulsed-field gel electrophoresis. Application to French and Danish isolates. Epidemiol. Infect. 124:103-111.
    • (2000) Epidemiol. Infect , vol.124 , pp. 103-111
    • Cousin-Allery, A.1    Charron, A.2    de Barbeyrac, B.3    Fremy, G.4    Skov Jensen, J.5    Renaudin, H.6    Bebear, C.7
  • 6
    • 0030759333 scopus 로고    scopus 로고
    • Prediction of transmembrane alpha-helices in prokaryotic membrane proteins: The dense alignment surface method
    • Cserzo, M., E. Wallin, I. Simon, G. von Heijne, and A. Elofsson. 1997. Prediction of transmembrane alpha-helices in prokaryotic membrane proteins: the dense alignment surface method. Protein Eng. 10:673-676.
    • (1997) Protein Eng , vol.10 , pp. 673-676
    • Cserzo, M.1    Wallin, E.2    Simon, I.3    von Heijne, G.4    Elofsson, A.5
  • 7
    • 0034051472 scopus 로고    scopus 로고
    • Genotyping of Mycoplasma pneumoniae clinical isolates reveals eight P1 subtypes within two genomic groups
    • Dorigo-Zetsma, J. W., J. Dankert, and S. A. Zaat. 2000. Genotyping of Mycoplasma pneumoniae clinical isolates reveals eight P1 subtypes within two genomic groups. J. Clin. Microbiol. 38:965-970.
    • (2000) J. Clin. Microbiol , vol.38 , pp. 965-970
    • Dorigo-Zetsma, J.W.1    Dankert, J.2    Zaat, S.A.3
  • 8
    • 0034860455 scopus 로고    scopus 로고
    • Mycoplasma pneumoniae P1 type 1- and type 2-specific sequences within the P1 cytadhesin gene of individual strains
    • Dorigo-Zetsma, J. W., B. Wilbrink, J. Dankert, and S. A. Zaat. 2001. Mycoplasma pneumoniae P1 type 1- and type 2-specific sequences within the P1 cytadhesin gene of individual strains. Infect. Immun. 69:5612-5618.
    • (2001) Infect. Immun , vol.69 , pp. 5612-5618
    • Dorigo-Zetsma, J.W.1    Wilbrink, B.2    Dankert, J.3    Zaat, S.A.4
  • 9
    • 0036488846 scopus 로고    scopus 로고
    • Subtyping of Mycoplasma pneumoniae isolates based on extended genome sequencing and on expression profiles
    • Dumke, R., I. Catrein, E. Pirkil, R. Herrmann, and E. Jacobs. 2003. Subtyping of Mycoplasma pneumoniae isolates based on extended genome sequencing and on expression profiles. Int. J. Med. Microbiol. 292:513-525.
    • (2003) Int. J. Med. Microbiol , vol.292 , pp. 513-525
    • Dumke, R.1    Catrein, I.2    Pirkil, E.3    Herrmann, R.4    Jacobs, E.5
  • 10
    • 0030027863 scopus 로고    scopus 로고
    • The repetitive element Rep MP 1 of Mycoplasma pneumoniae exists as a core element within a larger, variable repetitive mosaic
    • Forsyth, M. H., and S. J. Geary. 1996. The repetitive element Rep MP 1 of Mycoplasma pneumoniae exists as a core element within a larger, variable repetitive mosaic. J. Bacteriol. 178:917-921.
    • (1996) J. Bacteriol , vol.178 , pp. 917-921
    • Forsyth, M.H.1    Geary, S.J.2
  • 12
    • 0024590007 scopus 로고
    • Parallel association of Fos and Jun leucine zippers juxtaposes DNA binding domains
    • Gentz, R., F. J. Rauscher III, C. Abate, and T. Curran. 1989. Parallel association of Fos and Jun leucine zippers juxtaposes DNA binding domains. Science 243:1695-1699.
    • (1989) Science , vol.243 , pp. 1695-1699
    • Gentz, R.1    Rauscher III, F.J.2    Abate, C.3    Curran, T.4
  • 13
    • 33748989006 scopus 로고    scopus 로고
    • Transposon mutagenesis identifies genes associated with Mycoplasma pneumoniae gliding motility
    • Hasselbring, B. M., C. A. Page, E. S. Sheppard, and D. C. Krause. 2006. Transposon mutagenesis identifies genes associated with Mycoplasma pneumoniae gliding motility. J. Bacteriol. 188:6335-6345.
    • (2006) J. Bacteriol , vol.188 , pp. 6335-6345
    • Hasselbring, B.M.1    Page, C.A.2    Sheppard, E.S.3    Krause, D.C.4
  • 14
    • 0027436344 scopus 로고
    • Conserved and variable regions in protein Arp, the IgA receptor of Streptococcus pyogenes
    • Heden, L. O., and G. Lindahl. 1993. Conserved and variable regions in protein Arp, the IgA receptor of Streptococcus pyogenes. J. Gen. Microbiol. 139:2067-2074.
    • (1993) J. Gen. Microbiol , vol.139 , pp. 2067-2074
    • Heden, L.O.1    Lindahl, G.2
  • 15
    • 0029822218 scopus 로고    scopus 로고
    • Repetitive elements of the Mycoplasma hominis adhesin p50 can be differentiated by monoclonal antibodies
    • Henrich, B., A. Kitzerow, R. C. Feldmann, H. Schaal, and U. Hadding. 1996. Repetitive elements of the Mycoplasma hominis adhesin p50 can be differentiated by monoclonal antibodies. Infect. Immun. 64:4027-4034.
    • (1996) Infect. Immun , vol.64 , pp. 4027-4034
    • Henrich, B.1    Kitzerow, A.2    Feldmann, R.C.3    Schaal, H.4    Hadding, U.5
  • 17
    • 0030811859 scopus 로고    scopus 로고
    • Comparative analysis of the genomes of the bacteria Mycoplasma pneumoniae and Mycoplasma genitalium
    • Himmelreich, R., H. Plagens, H. Hilbert, B. Reiner, and R. Herrmann. 1997. Comparative analysis of the genomes of the bacteria Mycoplasma pneumoniae and Mycoplasma genitalium. Nucleic Acids Res. 25:701-712.
    • (1997) Nucleic Acids Res , vol.25 , pp. 701-712
    • Himmelreich, R.1    Plagens, H.2    Hilbert, H.3    Reiner, B.4    Herrmann, R.5
  • 18
    • 0025598302 scopus 로고
    • Sequence requirements for coiled-coils: Analysis with lambda repressor-GCN4 leucine zipper fusions
    • Hu, J. C., E. K. O'Shea, P. S. Kim, and R. T. Sauer. 1990. Sequence requirements for coiled-coils: analysis with lambda repressor-GCN4 leucine zipper fusions. Science 250:1400-1403.
    • (1990) Science , vol.250 , pp. 1400-1403
    • Hu, J.C.1    O'Shea, E.K.2    Kim, P.S.3    Sauer, R.T.4
  • 19
    • 0942287072 scopus 로고    scopus 로고
    • Proteogenomic mapping as a complementary method to perform genome annotation
    • Jaffe, J. D., H. C. Berg, and G. M. Church. 2004. Proteogenomic mapping as a complementary method to perform genome annotation. Proteomics 4:59-77.
    • (2004) Proteomics , vol.4 , pp. 59-77
    • Jaffe, J.D.1    Berg, H.C.2    Church, G.M.3
  • 20
    • 0032806050 scopus 로고    scopus 로고
    • Identification of a new variable sequence in the P1 cytadhesin gene of Mycoplasma pneumoniae: Evidence for the generation of antigenic variation by DNA recombination between repetitive sequences
    • Kenri, T., R. Taniguchi, Y. Sasaki, N. Okazaki, M. Narita, K. Izumikawa, M. Umetsu, and T. Sasaki. 1999. Identification of a new variable sequence in the P1 cytadhesin gene of Mycoplasma pneumoniae: evidence for the generation of antigenic variation by DNA recombination between repetitive sequences. Infect. Immun. 67:4557-4562.
    • (1999) Infect. Immun , vol.67 , pp. 4557-4562
    • Kenri, T.1    Taniguchi, R.2    Sasaki, Y.3    Okazaki, N.4    Narita, M.5    Izumikawa, K.6    Umetsu, M.7    Sasaki, T.8
  • 21
    • 0029937832 scopus 로고    scopus 로고
    • Mycoplasma pneumoniae cytadherence: Unravelling the tie that binds
    • Krause, D. C. 1996. Mycoplasma pneumoniae cytadherence: unravelling the tie that binds. Mol. Microbiol. 20:247-253.
    • (1996) Mol. Microbiol , vol.20 , pp. 247-253
    • Krause, D.C.1
  • 22
    • 0024518919 scopus 로고
    • The DNA binding domain of the rat liver nuclear protein C/EBP is bipartite
    • Landschulz, W. H., P. F. Johnson, and S. L. McKnight. 1989. The DNA binding domain of the rat liver nuclear protein C/EBP is bipartite. Science 243:1681-1688.
    • (1989) Science , vol.243 , pp. 1681-1688
    • Landschulz, W.H.1    Johnson, P.F.2    McKnight, S.L.3
  • 23
    • 0024295767 scopus 로고
    • The leucine zipper: A hypothetical structure common to a new class of DNA binding proteins
    • Landschulz, W. H., P. F. Johnson, and S. L. McKnight. 1988. The leucine zipper: a hypothetical structure common to a new class of DNA binding proteins. Science 240:1759-1764.
    • (1988) Science , vol.240 , pp. 1759-1764
    • Landschulz, W.H.1    Johnson, P.F.2    McKnight, S.L.3
  • 24
    • 17644366759 scopus 로고    scopus 로고
    • Transcription attenuation: A highly conserved regulatory strategy used by bacteria
    • Merino, E., and C. Yanofsky. 2005. Transcription attenuation: a highly conserved regulatory strategy used by bacteria. Trends Genet. 21:260-264.
    • (2005) Trends Genet , vol.21 , pp. 260-264
    • Merino, E.1    Yanofsky, C.2
  • 25
    • 0024534241 scopus 로고
    • Evidence that the leucine zipper is a coiled coil
    • O'Shea, E. K., R. Rutkowski, and P. S. Kim. 1989. Evidence that the leucine zipper is a coiled coil. Science 243:538-542.
    • (1989) Science , vol.243 , pp. 538-542
    • O'Shea, E.K.1    Rutkowski, R.2    Kim, P.S.3
  • 26
    • 0029025535 scopus 로고
    • The proline-rich P65 protein of Mycoplasma pneumoniae is a component of the Triton X-100-insoluble fraction and exhibits size polymorphism in the strains M129 and FH
    • Proft, T., H. Hilbert, G. Layh-Schmitt, and R. Herrmann. 1995. The proline-rich P65 protein of Mycoplasma pneumoniae is a component of the Triton X-100-insoluble fraction and exhibits size polymorphism in the strains M129 and FH. J. Bacteriol. 177:3370-3378.
    • (1995) J. Bacteriol , vol.177 , pp. 3370-3378
    • Proft, T.1    Hilbert, H.2    Layh-Schmitt, G.3    Herrmann, R.4
  • 27
    • 0035050279 scopus 로고    scopus 로고
    • Defining the mycoplasma 'cytoskeleton': The protein composition of the Triton X-100 insoluble fraction of the bacterium Mycoplasma pneumoniae determined by 2-D gel electrophoresis and mass spectrometry
    • Regula, J. T., G. Boguth, A. Gorg, J. Hegermann, F. Mayer, R. Frank, and R. Herrmann. 2001. Defining the mycoplasma 'cytoskeleton': the protein composition of the Triton X-100 insoluble fraction of the bacterium Mycoplasma pneumoniae determined by 2-D gel electrophoresis and mass spectrometry. Microbiology 147:1045-1057.
    • (2001) Microbiology , vol.147 , pp. 1045-1057
    • Regula, J.T.1    Boguth, G.2    Gorg, A.3    Hegermann, J.4    Mayer, F.5    Frank, R.6    Herrmann, R.7
  • 29
    • 0036567258 scopus 로고    scopus 로고
    • Genomic repeats, genome plasticity and the dynamics of Mycoplasma evolution
    • Rocha, E. P., and A. Blanchard. 2002. Genomic repeats, genome plasticity and the dynamics of Mycoplasma evolution. Nucleic Acids Res. 30:2031-2042.
    • (2002) Nucleic Acids Res , vol.30 , pp. 2031-2042
    • Rocha, E.P.1    Blanchard, A.2
  • 30
    • 0028093381 scopus 로고
    • Sequence divergence in the ORF6 gene of Mycoplasma pneumonia
    • Ruland, K., R. Himmelreich, and R. Herrmann. 1994. Sequence divergence in the ORF6 gene of Mycoplasma pneumonia. J. Bacteriol. 176:5202-5209.
    • (1994) J. Bacteriol , vol.176 , pp. 5202-5209
    • Ruland, K.1    Himmelreich, R.2    Herrmann, R.3
  • 31
    • 0024993787 scopus 로고
    • Analysis of three different repeated DNA elements present in the P1 operon of Mycoplasma pneumoniae: Size, number and distribution on the genome
    • Ruland, K., R. Wenzel, and R. Herrmann. 1990. Analysis of three different repeated DNA elements present in the P1 operon of Mycoplasma pneumoniae: size, number and distribution on the genome. Nucleic Acids Res. 18:6311-6317.
    • (1990) Nucleic Acids Res , vol.18 , pp. 6311-6317
    • Ruland, K.1    Wenzel, R.2    Herrmann, R.3
  • 32
    • 0030068627 scopus 로고    scopus 로고
    • Epidemiological study of Mycoplasma pneumoniae infections in Japan based on PCR-restriction fragment length polymorphism of the P1 cytadhesin gene
    • Sasaki, T., T. Kenri, N. Okazaki, M. Iseki, R. Yamashita, M. Shintani, Y. Sasaki, and M. Yayoshi. 1996. Epidemiological study of Mycoplasma pneumoniae infections in Japan based on PCR-restriction fragment length polymorphism of the P1 cytadhesin gene. J. Clin. Microbiol. 34:447-449.
    • (1996) J. Clin. Microbiol , vol.34 , pp. 447-449
    • Sasaki, T.1    Kenri, T.2    Okazaki, N.3    Iseki, M.4    Yamashita, R.5    Shintani, M.6    Sasaki, Y.7    Yayoshi, M.8
  • 33
    • 0023794290 scopus 로고
    • Regions of Mycoplasma pneumoniae cytadhesin P1 structural gene exist as multiple copies
    • Su, C. J., A. Chavoya, and J. B. Baseman. 1988. Regions of Mycoplasma pneumoniae cytadhesin P1 structural gene exist as multiple copies. Infect. Immun. 56:3157-3161.
    • (1988) Infect. Immun , vol.56 , pp. 3157-3161
    • Su, C.J.1    Chavoya, A.2    Baseman, J.B.3
  • 34
    • 0025375215 scopus 로고
    • Sequence divergency of the cytadhesin gene of Mycoplasma pneumoniae
    • Su, C. J., A. Chavoya, S. F. Dallo, and J. B. Baseman. 1990. Sequence divergency of the cytadhesin gene of Mycoplasma pneumoniae. Infect. Immun. 58:2669-2674.
    • (1990) Infect. Immun , vol.58 , pp. 2669-2674
    • Su, C.J.1    Chavoya, A.2    Dallo, S.F.3    Baseman, J.B.4
  • 35
    • 0025352306 scopus 로고
    • Molecular distinctions among clinical isolates of Mycoplasma pneumoniae
    • Su, C. J., S. F. Dallo, and J. B. Baseman. 1990. Molecular distinctions among clinical isolates of Mycoplasma pneumoniae. J. Clin. Microbiol. 28:1538-1540.
    • (1990) J. Clin. Microbiol , vol.28 , pp. 1538-1540
    • Su, C.J.1    Dallo, S.F.2    Baseman, J.B.3
  • 36
    • 0027399251 scopus 로고
    • Possible origin of sequence divergence in the P1 cytadhesin gene of Mycoplasma pneumoniae
    • Su, C. J., S. F. Dallo, A. Chavoya, and J. B. Baseman. 1993. Possible origin of sequence divergence in the P1 cytadhesin gene of Mycoplasma pneumoniae. Infect. Immun. 61:816-822.
    • (1993) Infect. Immun , vol.61 , pp. 816-822
    • Su, C.J.1    Dallo, S.F.2    Chavoya, A.3    Baseman, J.B.4
  • 37
    • 0023489740 scopus 로고
    • Cloning and sequence analysis of cytadhesin P1 gene from Mycoplasma pneumoniae
    • Su, C. J., V. V. Tryon, and J. B. Baseman. 1987. Cloning and sequence analysis of cytadhesin P1 gene from Mycoplasma pneumoniae. Infect. Immun. 55:3023-3029.
    • (1987) Infect. Immun , vol.55 , pp. 3023-3029
    • Su, C.J.1    Tryon, V.V.2    Baseman, J.B.3
  • 39
    • 5644300391 scopus 로고    scopus 로고
    • Mycoplasma pneumoniae and its role as a human pathogen
    • Waites, K. B., and D. F. Talkington. 2004. Mycoplasma pneumoniae and its role as a human pathogen. Clin. Microbiol. Rev. 17:697-728.
    • (2004) Clin. Microbiol. Rev , vol.17 , pp. 697-728
    • Waites, K.B.1    Talkington, D.F.2
  • 40
    • 11844280980 scopus 로고    scopus 로고
    • Identification and complementation of a mutation associated with loss of Mycoplasma pneumoniae virulence-specific proteins B and C
    • Waldo, R. H., III, J. L. Jordan, and D. C. Krause. 2005. Identification and complementation of a mutation associated with loss of Mycoplasma pneumoniae virulence-specific proteins B and C. J. Bacteriol. 187:747-751.
    • (2005) J. Bacteriol , vol.187 , pp. 747-751
    • Waldo III, R.H.1    Jordan, J.L.2    Krause, D.C.3
  • 41
    • 30744437712 scopus 로고    scopus 로고
    • Synthesis, stability, and function of cytadhesin P1 and accessory protein B/C complex of Mycoplasma pneumoniae
    • Waldo, R. H., III, and D. C. Krause. 2006. Synthesis, stability, and function of cytadhesin P1 and accessory protein B/C complex of Mycoplasma pneumoniae. J. Bacteriol. 188:569-575.
    • (2006) J. Bacteriol , vol.188 , pp. 569-575
    • Waldo III, R.H.1    Krause, D.C.2
  • 43
    • 0023727048 scopus 로고
    • Repetitive DNA sequences in Mycoplasma pneumoniae
    • Wenzel, R., and R. Herrmann. 1988. Repetitive DNA sequences in Mycoplasma pneumoniae. Nucleic Acids Res. 16:8337-8350.
    • (1988) Nucleic Acids Res , vol.16 , pp. 8337-8350
    • Wenzel, R.1    Herrmann, R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.