The TIE1 transcriptional repressor links TCP transcription factors with TOPLESS/TOPLESS-RELATED corepressors and modulates leaf development in Arabidopsis

Plant Cell

Volumn 25, Issue 2, 2013, Pages 421-437

  Tao, Qing ^a   Guo, Dongshu ^a   Wei, Baoye ^a   Zhang, Fan ^a   Pang, Changxu ^a   Jiang, Hao ^a   Zhang, Jinzhe ^a   Wei, Tong ^a   Gu, Hongya ^a,b   Qu, Li Jia ^a,b   Qin, Genji ^a  

^a PEKING UNIVERSITY   (China)

^b INSTITUTE OF GENETICS AND DEVELOPMENTAL BIOLOGY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

ARABIDOPSIS;

EID: 84875512480     PISSN: 10404651     EISSN: 1532298X     Source Type: Journal    
DOI: 10.1105/tpc.113.109223     Document Type: Article

References (56)

1. Aoyama, T., and Chua, N.H. (1997). A glucocorticoid-mediated transcriptional induction system in transgenic plants. Plant J. 11: 605-612.
2. Byrne, M.E. (2005). Networks in leaf development. Curr. Opin. Plant Biol. 8: 59-66.
3. Causier, B., Ashworth, M., Guo, W., and Davies, B. (2012). The TOPLESS interactome: A framework for gene repression in Arabidopsis. Plant Physiol. 158: 423-438.
4. Ciftci-Yilmaz, S., Morsy, M.R., Song, L., Coutu, A., Krizek, B.A., Lewis, M.W., Warren, D., Cushman, J., Connolly, E.L., and Mittler, R. (2007). The EAR-motif of the Cys2/His2-type zinc finger protein Zat7 plays a key role in the defense response of Arabidopsis to salinity stress. J. Biol. Chem. 282: 9260-9268.
5. Crawford, B.C., Nath, U., Carpenter, R., and Coen, E.S. (2004). CINCINNATA controls both cell differentiation and growth in petal lobes and leaves of Antirrhinum. Plant Physiol. 135: 244-253.
6. Cubas, P., Lauter, N., Doebley, J., and Coen, E. (1999). The TCP domain: A motif found in proteins regulating plant growth and development. Plant J. 18: 215-222.
7. Dingwall, C., Robbins, J., Dilworth, S.M., Roberts, B., and Richardson, W.D. (1988). The nucleoplasmin nuclear location sequence is larger and more complex than that of SV-40 large T antigen. J. Cell Biol. 107: 841-849.
8. Efroni, I., Blum, E., Goldshmidt, A., and Eshed, Y. (2008). A protracted and dynamic maturation schedule underlies Arabidopsis leaf development. Plant Cell 20: 2293-2306.
9. Guo, M., Thomas, J., Collins, G., and Timmermans, M.C. (2008). Direct repression of KNOX loci by the ASYMMETRIC LEAVES1 complex of Arabidopsis. Plant Cell 20: 48-58.
10. Hake, S., Smith, H.M., Holtan, H., Magnani, E., Mele, G., and Ramirez, J. (2004). The role of knox genes in plant development. Annu. Rev. Cell Dev. Biol. 20: 125-151.
11. Hajdukiewicz, P., Svab, Z., and Maliga, P. (1994). The small, versatile pPZP family of Agrobacterium binary vectors for plant transformation. Plant Mol. Biol. 25: 989-994.
12. Hay, A., Barkoulas, M., and Tsiantis, M. (2006). ASYMMETRIC LEAVES1 and auxin activities converge to repress BREVIPEDICELLUS expression and promote leaf development in Arabidopsis. Development 133: 3955-3961.
13. Hay, A., and Tsiantis, M. (2009). A KNOX family TALE. Curr. Opin. Plant Biol. 12: 593-598.
14. Hill, K., Wang, H., and Perry, S.E. (2008). A transcriptional repression motif in theMADS factor AGL15 is involved in recruitment of histone deacetylase complex components. Plant J. 53: 172-185.
15. Hiratsu, K., Ohta, M., Matsui, K., and Ohme-Takagi, M. (2002). The SUPERMAN protein is an active repressor whose carboxy-terminal repression domain is required for the development of normal flowers. FEBS Lett. 514: 351-354.
16. Hou, X., Lee, L.Y., Xia, K., Yan, Y., and Yu, H. (2010). DELLAs modulate jasmonate signaling via competitive binding to JAZs. Dev. Cell 19: 884-894.
17. Kagale, S., Links, M.G., and Rozwadowski, K. (2010). Genome-wide analysis of ethylene-responsive element binding factor-associated amphiphilic repression motif-containing transcriptional regulators in Arabidopsis. Plant Physiol. 152: 1109-1134.
18. Katz, A., Oliva, M., Mosquna, A., Hakim, O., and Ohad, N. (2004). FIE and CURLY LEAF polycomb proteins interact in the regulation of homeobox gene expression during sporophyte development. Plant J. 37: 707-719.
19. Koyama, T., Furutani, M., Tasaka, M., and Ohme-Takagi, M. (2007). TCP transcription factors control the morphology of shoot lateral organs via negative regulation of the expression of boundary-specific genes in Arabidopsis. Plant Cell 19: 473-484.
20. Koyama, T., Mitsuda, N., Seki, M., Shinozaki, K., and Ohme-Takagi, M. (2010). TCP transcription factors regulate the activities of ASYMMETRIC LEAVES1 and miR164, as well as the auxin response, during differentiation of leaves in Arabidopsis. Plant Cell 22: 3574-3588.
21. Kuchen, E.E., Fox, S., de Reuille, P.B., Kennaway, R., Bensmihen, S., Avondo, J., Calder, G.M., Southam, P., Robinson, S., Bangham, A., and Coen, E. (2012). Generation of leaf shape through early patterns of growth and tissue polarity. Science 335: 1092-1096.
22. Li, H., Tiwari, S.B., Hagen, G., and Guilfoyle, T.J. (2011). Identical amino acid substitutions in the repression domain of auxin/indole-3-acetic acid proteins have contrasting effects on auxin signaling. Plant Physiol. 155: 1252-1263.
23. Liu, C., Xi, W., Shen, L., Tan, C., and Yu, H. (2009). Regulation of floral patterning by flowering time genes. Dev. Cell 16: 711-722.
24. Livak, K.J., and Schmittgen, T.D. (2001). Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T) method. Methods 25: 402-408.
25. Long, J.A., Ohno, C., Smith, Z.R., and Meyerowitz, E.M. (2006). TOPLESS regulates apical embryonic fate in Arabidopsis. Science 312: 1520-1523.
26. Luo, Y., Qin, G., Zhang, J., Liang, Y., Song, Y., Zhao, M., Tsuge, T., Aoyama, T., Liu, J., Gu, H., and Qu, L.J. (2011). D-myo-inositol-3-phosphate affects phosphatidylinositol-mediated endomembrane function in Arabidopsis and is essential for auxin-regulated embryogenesis. Plant Cell 23: 1352-1372.
27. Martín-Trillo, M., and Cubas, P. (2010). TCP genes: A family snapshot ten years later. Trends Plant Sci. 15: 31-39.
28. Masuda, H.P., Cabral, L.M., De Veylder, L., Tanurdzic, M., de Almeida Engler, J., Geelen, D., Inzé, D., Martienssen, R.A., Ferreira, P.C., and Hemerly, A.S. (2008). ABAP1 is a novel plant Armadillo BTB protein involved in DNA replication and transcription. EMBO J. 27: 2746-2756.
29. Nath, U., Crawford, B.C., Carpenter, R., and Coen, E. (2003). Genetic control of surface curvature. Science 299: 1404-1407.
30. Navaud, O., Dabos, P., Carnus, E., Tremousaygue, D., and Hervé, C. (2007). TCP transcription factors predate the emergence of land plants. J. Mol. Evol. 65: 23-33.
31. Nishal, B., Tantikanjana, T., and Sundaresan, V. (2005). An inducible targeted tagging system for localized saturation mutagenesis in Arabidopsis. Plant Physiol. 137: 3-12.
32. Ohta, M., Matsui, K., Hiratsu, K., Shinshi, H., and Ohme-Takagi, M. (2001). Repression domains of class II ERF transcriptional repressors share an essential motif for active repression. Plant Cell 13: 1959-1968.
33. Ori, N., et al. (2007). Regulation of LANCEOLATE by miR319 is required for compound-leaf development in tomato. Nat. Genet. 39: 787-791.
34. Ou, B., Yin, K.Q., Liu, S.N., Yang, Y., Gu, T., Wing Hui, J.M., Zhang, L., Miao, J., Kondou, Y., Matsui, M., Gu, H.Y., and Qu, L.J. (2011). A high-throughput screening system for Arabidopsis transcription factors and its application to Med25-dependent transcriptional regulation. Mol. Plant 4: 546-555.
35. Palatnik, J.F., Allen, E., Wu, X., Schommer, C., Schwab, R., Carrington, J.C., and Weigel, D. (2003). Control of leaf morphogenesis by microRNAs. Nature 425: 257-263.
36. Palatnik, J.F., Wollmann, H., Schommer, C., Schwab, R., Boisbouvier, J., Rodriguez, R., Warthmann, N., Allen, E., Dezulian, T., Huson, D., Carrington, J.C., and Weigel, D. (2007). Sequence and expression differences underlie functional specialization of Arabidopsis microRNAs miR159 and miR319. Dev. Cell 13: 115-125.
37. Pauwels, L., et al. (2010). NINJA connects the co-repressor TOPLESS to jasmonate signalling. Nature 464: 788-791.
38. Phelps-Durr, T.L., Thomas, J., Vahab, P., and Timmermans, M.C. (2005). Maize rough sheath2 and its Arabidopsis orthologue ASYMMETRIC LEAVES1 interact with HIRA, a predicted histone chaperone, to maintain knox gene silencing and determinacy during organogenesis. Plant Cell 17: 2886-2898.
39. Pruneda-Paz, J.L., Breton, G., Para, A., and Kay, S.A. (2009). A functional genomics approach reveals CHE as a component of the Arabidopsis circadian clock. Science 323: 1481-1485.
40. Qin, G., Gu, H., Zhao, Y., Ma, Z., Shi, G., Yang, Y., Pichersky, E., Chen, H., Liu, M., Chen, Z., and Qu, L.J. (2005). An indole-3-acetic acid carboxyl methyltransferase regulates Arabidopsis leaf development. Plant Cell 17: 2693-2704.
41. Qin, G.J., et al. (2003). Obtaining and analysis of flanking sequences from T-DNA transformants of Arabidopsis. Plant Sci. 165: 941-949.
42. Rast, M.I., and Simon, R. (2012). Arabidopsis JAGGED LATERAL ORGANS acts with ASYMMETRIC LEAVES2 to coordinate KNOX and PIN expression in shoot and root meristems. Plant Cell 24: 2917-2933.
43. Schommer, C., Palatnik, J.F., Aggarwal, P., Chételat, A., Cubas, P., Farmer, E.E., Nath, U., and Weigel, D. (2008). Control of jasmonate biosynthesis and senescence by miR319 targets. PLoS Biol. 6: e230.
44. Schubert, D., Primavesi, L., Bishopp, A., Roberts, G., Doonan, J., Jenuwein, T., and Goodrich, J. (2006). Silencing by plant Polycombgroup genes requires dispersed trimethylation of histone H3 at lysine 27. EMBO J. 25: 4638-4649.
45. Shleizer-Burko, S., Burko, Y., Ben-Herzel, O., and Ori, N. (2011). Dynamic growth program regulated by LANCEOLATE enables flexible leaf patterning. Development 138: 695-704.
46. Shyu, C., Figueroa, P., Depew, C.L., Cooke, T.F., Sheard, L.B., Moreno, J.E., Katsir, L., Zheng, N., Browse, J., and Howe, G.A. (2012). JAZ8 lacks a canonical degron and has an EAR motif that mediates transcriptional repression of jasmonate responses in Arabidopsis. Plant Cell 24: 536-550.
47. Smith, L.G., Greene, B., Veit, B., and Hake, S. (1992). A dominant mutation in the maize homeobox gene, Knotted-1, causes its ectopic expression in leaf cells with altered fates. Development 116: 21-30.
48. Steiner, E., Efroni, I., Gopalraj, M., Saathoff, K., Tseng, T.S., Kieffer, M., Eshed, Y., Olszewski, N., and Weiss, D. (2012). The Arabidopsis O-linked N-acetylglucosamine transferase SPINDLY interacts with class I TCPs to facilitate cytokinin responses in leaves and flowers. Plant Cell 24: 96-108.
49. Song, C.P., and Galbraith, D.W. (2006). AtSAP18, an orthologue of human SAP18, is involved in the regulation of salt stress and mediates transcriptional repression in Arabidopsis. Plant Mol. Biol. 60: 241-257.
50. Sun, S.J., Guo, S.Q., Yang, X., Bao, Y.M., Tang, H.J., Sun, H., Huang, J., and Zhang, H.S. (2010). Functional analysis of a novel Cys2/His2-type zinc finger protein involved in salt tolerance in rice. J. Exp. Bot. 61: 2807-2818.
51. Szemenyei, H., Hannon, M., and Long, J.A. (2008). TOPLESS mediates auxin-dependent transcriptional repression during Arabidopsis embryogenesis. Science 319: 1384-1386.
52. Tsiantis, M., and Hay, A. (2003). Comparative plant development: The time of the leaf? Nat. Rev. Genet. 4: 169-180.
53. Voinnet, O., Rivas, S., Mestre, P., and Baulcombe, D. (2003). An enhanced transient expression system in plants based on suppression of gene silencing by the p19 protein of tomato bushy stunt virus. Plant J. 33: 949-956.
54. Wang, W.Y., Zhang, L., Xing, S., Ma, Z., Liu, J., Gu, H., Qin, G., and Qu, L.J. (2012). Arabidopsis AtVPS15 plays essential roles in pollen germination possibly by interacting with AtVPS34. J. Genet. Genomics 39: 81-92.
55. Weigel, D., et al. (2000). Activation tagging in Arabidopsis. Plant Physiol. 122: 1003-1013.
56. Xu, L., and Shen, W.H. (2008). Polycomb silencing of KNOX genes confines shoot stem cell niches in Arabidopsis. Curr. Biol. 18: 1966-1971.