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Volumn 7821 LNBI, Issue , 2013, Pages 212-229

An accurate method for inferring relatedness in large datasets of unphased genotypes via an embedded likelihood-ratio test

Author keywords

IBD; Population genetics; relatedness

Indexed keywords

EFFICIENT DETECTION; GENOME-WIDE ASSOCIATION STUDIES; IBD; LIKELIHOOD RATIO TESTS; LIKELIHOOD-RATIO TEST; POPULATION GENETICS; RELATEDNESS; STATE OF THE ART;

EID: 84875506686     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-642-37195-0_18     Document Type: Conference Paper
Times cited : (5)

References (28)
  • 1
    • 0036338150 scopus 로고    scopus 로고
    • Merlin-rapid analysis of dense genetic maps using sparse gene flow trees
    • Abecasis, G.R., Cherny, S.S., Cookson, W.O., Cardon, L.R.: Merlin-rapid analysis of dense genetic maps using sparse gene flow trees. Nat. Genet. 30(1), 97-101 (2002)
    • (2002) Nat. Genet. , vol.30 , Issue.1 , pp. 97-101
    • Abecasis, G.R.1    Cherny, S.S.2    Cookson, W.O.3    Cardon, L.R.4
  • 2
    • 77951435275 scopus 로고    scopus 로고
    • Homozygosity mapping: One more tool in the clinical geneticist's toolbox
    • Alkuraya, F.S.: Homozygosity mapping: one more tool in the clinical geneticist's toolbox. Genet. Med. 12(4), 236-239 (2010)
    • (2010) Genet. Med. , vol.12 , Issue.4 , pp. 236-239
    • Alkuraya, F.S.1
  • 4
    • 77954189460 scopus 로고    scopus 로고
    • Estimating genome-wide ibd sharing from snp data via an efficient hidden markov model of ld with application to gene mapping
    • Bercovici, S., Meek, C., Wexler, Y., Geiger, D.: Estimating genome-wide ibd sharing from snp data via an efficient hidden markov model of ld with application to gene mapping. Bioinformatics 26(12), i175-i182 (2010)
    • (2010) Bioinformatics , vol.26 , Issue.12
    • Bercovici, S.1    Meek, C.2    Wexler, Y.3    Geiger, D.4
  • 5
    • 79851497145 scopus 로고    scopus 로고
    • A fast, powerful method for detecting identity by descent
    • Browning, B.L., Browning, S.R.: A fast, powerful method for detecting identity by descent. American Journal of Human Genetics 88(2), 173-182 (2011)
    • (2011) American Journal of Human Genetics , vol.88 , Issue.2 , pp. 173-182
    • Browning, B.L.1    Browning, S.R.2
  • 6
    • 35348817330 scopus 로고    scopus 로고
    • Rapid and accurate haplotype phasing and missingdata inference for whole-genome association studies by use of localized haplotype clustering
    • Browning, S., Browning, B.: Rapid and accurate haplotype phasing and missingdata inference for whole-genome association studies by use of localized haplotype clustering. Am. J. Hum. Genet. 81(5), 1084-1097 (2007)
    • (2007) Am. J. Hum. Genet. , vol.81 , Issue.5 , pp. 1084-1097
    • Browning, S.1    Browning, B.2
  • 7
    • 84859588748 scopus 로고    scopus 로고
    • Detecting Rare Variant Associations by Identity by Descent Mapping in Case-control Studies
    • Browning, S., Thompson, E.: Detecting Rare Variant Associations by Identity by Descent Mapping in Case-control Studies. Genetics 190, 1521-1531 (2012)
    • (2012) Genetics , vol.190 , pp. 1521-1531
    • Browning, S.1    Thompson, E.2
  • 8
    • 77950332127 scopus 로고    scopus 로고
    • High-Resolution Detection of Identity by Descent in Unrelated Individuals
    • Browning, S.R., Browning, B.L.: High-Resolution Detection of Identity by Descent in Unrelated Individuals. American Journal of Human Genetics 86(4), 526-539 (2010)
    • (2010) American Journal of Human Genetics , vol.86 , Issue.4 , pp. 526-539
    • Browning, S.R.1    Browning, B.L.2
  • 9
    • 82855161057 scopus 로고    scopus 로고
    • Mathematical and statistical methods for genetic analysis
    • (2nd ed.). kenneth lange.
    • Carey, V.J.: Mathematical and statistical methods for genetic analysis (2nd ed.). kenneth lange. Journal of the American Statistical Association 100, 712 (2005)
    • (2005) Journal of the American Statistical Association , vol.100 , pp. 712
    • Carey, V.J.1
  • 11
    • 0015183542 scopus 로고
    • A general model for the analysis of pedigree data
    • Elston, R., Stewart, J.: A general model for the analysis of pedigree data. Hum. Hered. 21, 523-542 (1971)
    • (1971) Hum. Hered. , vol.21 , pp. 523-542
    • Elston, R.1    Stewart, J.2
  • 19
    • 80655128543 scopus 로고    scopus 로고
    • A comparison of approaches to estimate the inbreeding coefficient and pairwise relatedness using genomic and pedigree data in a sheep population
    • Li, M.-H., Strandén, I., Tiirikka, T., Sevón-Aimonen, M.-L., Kantanen, J.: A comparison of approaches to estimate the inbreeding coefficient and pairwise relatedness using genomic and pedigree data in a sheep population. PLoS ONE 6(11), e26256 (2011)
    • (2011) PLoS ONE , vol.6 , Issue.11
    • Li, M.-H.1    Strandén, I.2    Tiirikka, T.3    Sevón-Aimonen, M.-L.4    Kantanen, J.5
  • 20
    • 0035071608 scopus 로고    scopus 로고
    • Efficient multipoint linkage analysis through reduction of inheritance space
    • Markianos, K., Daly, M.J., Kruglyak, L.: Efficient multipoint linkage analysis through reduction of inheritance space. Am. J. Hum. Genet. 68(4), 963-977 (2001)
    • (2001) Am. J. Hum. Genet. , vol.68 , Issue.4 , pp. 963-977
    • Markianos, K.1    Daly, M.J.2    Kruglyak, L.3
  • 21
    • 84975742565 scopus 로고    scopus 로고
    • A map of human genome variation from population-scale sequencing
    • 1000 Genomes Project
    • 1000 Genomes Project. A map of human genome variation from population-scale sequencing. Nature 467(7319),1061-1073 (2010)
    • (2010) Nature , vol.467 , Issue.7319 , pp. 1061-1073
  • 22
    • 79959893242 scopus 로고    scopus 로고
    • A method for detecting IBD regions simultaneously in multiple individuals with applications to disease genetics
    • Moltke, I., Albrechtsen, A., Thomas, Nielsen, F.C., Nielsen, R.: A method for detecting IBD regions simultaneously in multiple individuals with applications to disease genetics. Genome Research 21(7), 1168-1180 (2011)
    • (2011) Genome Research , vol.21 , Issue.7 , pp. 1168-1180
    • Moltke, I.1    Albrechtsen, A.2    Thomas3    Nielsen, F.C.4    Nielsen, R.5
  • 26
    • 0024610919 scopus 로고
    • A tutorial on hidden markov models and selected applications in speech recognition
    • Rabiner, L.R.: A tutorial on hidden markov models and selected applications in speech recognition. Proceedings of the IEEE, 257-286 (1989)
    • (1989) Proceedings of the IEEE , pp. 257-286
    • Rabiner, L.R.1
  • 28
    • 84969213492 scopus 로고    scopus 로고
    • Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls
    • WTCCC
    • WTCCC. Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls. Nature 447(7145), 661-678 (2007)
    • (2007) Nature , vol.447 , Issue.7145 , pp. 661-678


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.