Unique and species-specific microbial communities in Oscarella lobularis and other Mediterranean Oscarella species (Porifera: Homoscleromorpha)

Marine Biology

Volumn 160, Issue 4, 2013, Pages 781-791

  Gloeckner, Volker ^a   Hentschel, Ute ^a   Ereskovsky, Alexander V ^b   Schmitt, Susanne ^c  

^a UNIVERSITY OF WÜRZBURG   (Germany)

^b AVIGNON UNIVERSITÉ   (France)

^c UNIVERSITY OF MUNICH   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIOLOGY; BACTERIUM; COLOR MORPH; DOMINANCE; MICROBIAL ACTIVITY; MICROBIAL COMMUNITY; MOLECULAR ANALYSIS; MORPHOLOGY; NEW TAXON; SPONGE;

ALPHAPROTEOBACTERIA; BACTERIA (MICROORGANISMS); HOMOSCLEROMORPHA; OSCARELLA; OSCARELLA LOBULARIS; PORIFERA;

EID: 84875376621     PISSN: 00253162     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00227-012-2133-0     Document Type: Article

References (44)

1. Adamska M, Degnan BM, Green K, Zwafink C (2011) What sponges can tell us about the evolution of developmental processes. Zoology 114: 1-10.
2. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215: 403-410.
3. Ashelford KE, Chuzhanova NA, Fry JC, Jones AJ, Weightman AJ (2005) At least 1 in 20 16S rRNA sequence records currently held in public repositories is estimated to contain substantial anomalies. Appl Environ Microbiol 71: 7724-7736.
4. Bell JJ (2008) The functional roles of marine sponges. Estuar Coast Shelf S 79: 341-353.
5. Boury-Esnault N, Ereskovsky A, Bezac C, Tokina D (2003) Larval development in the Homoscleromorpha (Porifera, Demospongiae). Invertebr Biol 122: 187-202.
6. Ereskovsky AV (2006) A new species of Oscarella (Demospongiae: Plakinidae) from the Western Sea of Japan. Zootaxa 1376: 37-51.
7. Ereskovsky A, Boury-Esnault N (2002) Cleavage pattern in Oscarella species (Porifera, Demospongiae, Homoscleromorpha): transmission of maternal cells and symbiotic bacteria. J Nat Hist 36: 1761-1775.
8. Ereskovsky AV, Borchiellini C, Gazave E, Ivanisevic J, Lapébie P, Perez T, Renard E, Vacelet J (2009a) The Homoscleromorph sponge Oscarella lobularis, a promising sponge model in evolutionary and developmental biology: model sponge Oscarella lobularis. BioEssays 31: 89-97.
9. Ereskovsky AV, Sanamyan K, Vishnyakov AE (2009b) A new species of the genus Oscarella (Porifera: Homosclerophorida: Plakinidae) from the North-West Pacific. Cah Biol Mar 50: 369-381.
10. Ereskovsky AV, Renard E, Borchiellini C (2012) Cellular and molecular processes leading to embryo formation in sponges: evidences for high conservation of processes throughout animal evolution. Dev Genes Evol. doi: 10. 1007/s00427-012-0399-3.
11. Erwin PM, Lopez-Legentil S, Gonzalez-Pech R, Turon X (2012) A specific mix of generalists: bacterial symbionts in Mediterranean Ircinia spp. FEMS Microbiol Ecol 79: 619-637.
12. Fiore CL, Jutte PC (2010) Characterization of macrofaunal assemblages associated with sponges and tunicates collected off the southeastern United States. Invertebr Biol 129: 105-120.
13. Freckelton ML, Luter HM, Andreakis N, Webster NS, Motti CA (2012) Qualitative variation in colour morphotypes of Ianthella basta (Porifera: Verongida). Hydrobiologia 687: 191-203.
14. Gazave E, Lapébie P, Ereskovsky AV, Vacelet J, Renard E, Cardenas P, Borchiellini C (2012) No longer Demospongiae: Homoscleromorpha formal nomination as a fourth class of Porifera. Hydrobiologia 687: 3-10.
15. Gerce B, Schwartz T, Syldatk C, Hausmann R (2011) Differences between bacterial communities associated with the surface or tissue of Mediterranean sponge species. Microb Ecol 61: 769-782.
16. Giles E, Kamke J, Moitinho-Silva L, Taylor M, Hentschel U, Ravasi T, Schmitt S (2012) Bacterial community profiles in low microbial abundance sponges. FEMS Microbiol Ecol. doi: 10. 1111/j. 1574-6941. 2012. 01467. x.
17. Hentschel U, Hopke J, Horn M, Friedrich AB, Wagner M, Hacker J, Moore BS (2002) Molecular evidence for a uniform microbial community in sponges from different oceans. Appl Environ Microbiol 68: 4431-4440.
18. Hentschel U, Fieseler L, Wehrl M, Gernert C, Steinert M, Hacker J, Horn M (2003) Microbial diversity of marine sponges. In: Mueller WEG (ed) Marine molecular biotechnology. Springer, Berlin, pp 59-88.
19. Hentschel U, Usher KM, Taylor MW (2006) Marine sponges as microbial fermenters. FEMS Microbiol Ecol 55: 167-177.
20. Hentschel U, Piel J, Degnan SM, Taylor MW (2012) Genomic insights into the marine sponge microbiome. Nature Rev Microbiol. doi: 10. 1038/nrmicro2839.
21. Hooper J, van Soest RWM (2002) Systema Porifera: a guide to the classification of sponges, vol 2. Kluwer, New York.
22. Kamke J, Taylor MW, Schmitt S (2010) Activity profiles for marine sponge-associated bacteria obtained by 16S rRNA vs 16S rRNA gene comparisons. ISME J 4: 498-508.
23. Lane DJ (1991) 16S/23S rRNA sequencing. In: Stackebrandt E, Goodfellow M (eds) Nucleic acid techniques in bacterial systematics. Wiley, New York, pp 115-175.
24. Lapébie P, Gazave E, Ereskovsky A, Derelle R, Bézac C, Renard E, Houliston E, Borchiellini C (2009) WNT/beta-catenin signalling and epithelial patterning in the homoscleromorph sponge Oscarella. PLoS ONE 4: e5823.
25. Ludwig W, Struck O, Westram R et al (2004) ARB: a software environment for sequence data. Nucleic Acids Res 32: 1363-1371.
26. Muricy G, Pearse JS (2004) A new species of Oscarella (Demospongiae: Plakinidae) from California. Proc Calif Acad Sci 55: 598-612.
27. Muricy G, Boury-Esnault N, Bezac C, Vacelet J (1996) Cytological evidence for cryptic speciation in Mediterranean Oscarella species (Porifera, Homoscleromorpha). Can J Zool 74: 881-896.
28. Muyzer G, Brinkhoff T, Nübel U, Santegoeds C, Schäfer H, Wawer C (1998) Denaturing gradient gel electrophoresis (DGGE) in microbial ecology. In: Akkermans ADL, van Elsas JD, De Bruijn FJ (eds) Molecular microbial ecology manual. Kluwer, Dordrecht, 3. 4. 4, pp 1-27.
29. Nichols SA, Dirks W, Pearse JS, King N (2006) Early evolution of animal cell signaling and adhesion genes. Proc Natl Acad Sci USA 103: 12451-12456.
30. Perez T, Ivanisevic J, Dubois M, Pedel L, Thomas OP, Tokina D, Ereskovsky AV (2011) Oscarella balibaloi, a new sponge species (Homoscleromorpha: Plakinidae) from the Western Mediterranean Sea: cytological description, reproductive cycle and ecology. Mar Ecol-Evol Persp 32: 174-187.
31. Pruesse E, Quast C, Knittel K, Fuchs BM, Ludwig W, Peplies J, Gloeckner FO (2007) SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB. Nucleic Acids Res 35: 7188-7196.
32. Pruesse E, Peplies J, Gloeckner FO (2012) SINA: accurate high-throughput multiple sequence alignment of ribosomal RNA genes. Bioinformatics 28: 1823-1829.
33. Ribeiro S, Omena E, Muricy G (2003) Macrofauna associated to Mycale microsigmatosa (Porifera, Demospongiae) in Rio de Janeiro State, SE brazil. Estuar Coast Shelf Sci 57: 951-959.
34. Schmitt S, Wehrl M, Bayer K, Siegl A, Hentschel U (2007a) Marine sponges as models for commensal microbe-host interactions. Symbiosis 44: 43-50.
35. Schmitt S, Wehrl M, Lindquist N, Weisz JB, Hentschel U (2007b) Morphological and molecular analyses of microorganisms in Caribbean reef adult sponges and in corresponding reproductive material. In: Custódio MR, Lôbo-Hajdu G, Hajdu E, Muricy G (eds) Biodiversity, innovation and sustainability Série Livros 28. Museu Nacional, Rio de Janeiro, pp 561-568.
36. Schmitt S, Deines P, Behnam F, Wagner M, Taylor MW (2012a) Chloroflexi bacteria are more diverse, abundant, and similar in high than in low microbial abundance sponges. FEMS Microbiol Ecol 78: 497-510.
37. Schmitt S, Tsai P, Bell J, Fromont J, Ilan M, Lindquist N, Perez T, Rodrigo A, Schupp PJ, Vacelet J, Webster N, Hentschel U, Taylor MW (2012b) Assessing the complex sponge microbiota: core, variable and species-specific bacterial communities in marine sponges. ISME J 6: 564-576.
38. Sharp KH, Eam B, Faulkner DJ, Haygood MG (2007) Vertical transmission of diverse microbes in the tropical sponge Corticium sp. Appl Environ Microbiol 73: 622-629.
39. Siegl A, Bayer K, Kozytska S, Hentschel U, Schmitt S (2008) Sponges and microbes-new frontiers in an ancient symbiosis. Vie Milieu 58: 165-174.
40. Taylor MW, Radax R, Steger D, Wagner M (2007) Sponge-associated microorganisms: evolution, ecology, and biotechnological potential. Microbiol Mol Biol Rev 71: 295-347.
41. Vacelet J, Donadey C (1977) Electron microscope study of the association between some sponges and bacteria. J Exp Mar Biol Ecol 30: 301-314.
42. Vishnyakov AE, Ereskovsky AV (2009) Bacterial symbionts as an additional cytological marker for identification of sponges without a skeleton. Mar Biol 156: 1625-1632.
43. Webster NS, Taylor MW (2012) Marine sponges and their microbial symbionts: love and other relationships. Environ Microbiol 14: 335-346.
44. Weisz JB, Hentschel U, Lindquist N, Martens CS (2007) Linking abundance and diversity of sponge-associated microbial communities to metabolic differences in host sponges. Mar Biol 152: 475-483.