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Volumn 3, Issue 5, 2012, Pages 850-859

Estimating patterns and drivers of infection prevalence and intensity when detection is imperfect and sampling error occurs

Author keywords

Batrachochytrium dendrobatidis; Chytridiomycosis; Detection; Disease; Occupancy; Prevalence; Sensitivity; Specificity

Indexed keywords


EID: 84875270624     PISSN: None     EISSN: 2041210X     Source Type: Journal    
DOI: 10.1111/j.2041-210X.2012.00216.x     Document Type: Article
Times cited : (60)

References (49)
  • 1
  • 3
    • 84863002043 scopus 로고    scopus 로고
    • When can we ignore the problems of imperfect detection in comparative studies?
    • Archaux, F., Henry, P.Y. & Gimenez, O. (2012) When can we ignore the problems of imperfect detection in comparative studies? Methods in Ecology and Evolution, 3, 188-194.
    • (2012) Methods in Ecology and Evolution , vol.3 , pp. 188-194
    • Archaux, F.1    Henry, P.Y.2    Gimenez, O.3
  • 4
    • 34247114979 scopus 로고    scopus 로고
    • Sampling design trade-offs in occupancy studies with imperfect detection: examples and software
    • Bailey, L.L., Hines, J.E., Nichols, J.D. & MacKenzie, D.I. (2007) Sampling design trade-offs in occupancy studies with imperfect detection: examples and software. Ecological Applications, 17, 281-290.
    • (2007) Ecological Applications , vol.17 , pp. 281-290
    • Bailey, L.L.1    Hines, J.E.2    Nichols, J.D.3    MacKenzie, D.I.4
  • 9
    • 61449128375 scopus 로고    scopus 로고
    • Multi-state capture-recapture analysis under imperfect state observation: an application to disease models
    • Conn, P.B. & Cooch, E.G. (2009) Multi-state capture-recapture analysis under imperfect state observation: an application to disease models. Journal of Applied Ecology, 46, 486-492.
    • (2009) Journal of Applied Ecology , vol.46 , pp. 486-492
    • Conn, P.B.1    Cooch, E.G.2
  • 11
    • 0034695526 scopus 로고    scopus 로고
    • Emerging infectious diseases of wildlife - threats to biodiversity and human health
    • Daszak, P., Cunningham, A.C. & Hyatt, A.D. (2000) Emerging infectious diseases of wildlife - threats to biodiversity and human health. Science, 287, 443-449.
    • (2000) Science , vol.287 , pp. 443-449
    • Daszak, P.1    Cunningham, A.C.2    Hyatt, A.D.3
  • 12
    • 70349534372 scopus 로고    scopus 로고
    • Global emergence of Batrachochytrium dendrobatidis and amphibian chytridiomycosis in space, time, and host
    • Fisher, M.C., Garner, T.W.J. & Walker, S.F. (2009) Global emergence of Batrachochytrium dendrobatidis and amphibian chytridiomycosis in space, time, and host. Annual Review of Microbiology, 63, 291-310.
    • (2009) Annual Review of Microbiology , vol.63 , pp. 291-310
    • Fisher, M.C.1    Garner, T.W.J.2    Walker, S.F.3
  • 14
    • 79958850090 scopus 로고    scopus 로고
    • Reconciling multiple data sources to improve accuracy of large-scale prediction of forest disease incidence
    • Hanks, E.M., Hooten, M.B. & Baker, F.A. (2011) Reconciling multiple data sources to improve accuracy of large-scale prediction of forest disease incidence. Ecological Applications, 21, 1173-1188.
    • (2011) Ecological Applications , vol.21 , pp. 1173-1188
    • Hanks, E.M.1    Hooten, M.B.2    Baker, F.A.3
  • 17
    • 0025919476 scopus 로고
    • Some practical aspects of a conditional likelihood approach to capture experiments
    • Huggins, R.M. (1991) Some practical aspects of a conditional likelihood approach to capture experiments. Biometrics, 47, 725-732.
    • (1991) Biometrics , vol.47 , pp. 725-732
    • Huggins, R.M.1
  • 20
    • 79952561833 scopus 로고    scopus 로고
    • Parameter inference for an individual based model of chytridiomycosis in frogs
    • Johnson, L.R. & Briggs, C.J. (2011) Parameter inference for an individual based model of chytridiomycosis in frogs. Journal of Theoretical Biology, 277, 90-98.
    • (2011) Journal of Theoretical Biology , vol.277 , pp. 90-98
    • Johnson, L.R.1    Briggs, C.J.2
  • 21
    • 35448929504 scopus 로고    scopus 로고
    • The chytrid fungus Batrachochytrium dendrobatidis is non-randomly distributed across amphibian breeding habitats
    • Kriger, K.M. & Hero, J. (2007) The chytrid fungus Batrachochytrium dendrobatidis is non-randomly distributed across amphibian breeding habitats. Diversity and Distribution, 13, 1-8.
    • (2007) Diversity and Distribution , vol.13 , pp. 1-8
    • Kriger, K.M.1    Hero, J.2
  • 22
    • 84865054495 scopus 로고    scopus 로고
    • Site-occupancy modeling as a novel framework for assessing test sensitivity and estimating wildlife disease prevalence from imperfect diagnostic tests
    • Lachish, S., Gopalaswamy, A.M., Knowles, S.C.L. & Sheldon, B.C. (2012) Site-occupancy modeling as a novel framework for assessing test sensitivity and estimating wildlife disease prevalence from imperfect diagnostic tests. Methods in Ecology and Evolution, 3, 339-348.
    • (2012) Methods in Ecology and Evolution , vol.3 , pp. 339-348
    • Lachish, S.1    Gopalaswamy, A.M.2    Knowles, S.C.L.3    Sheldon, B.C.4
  • 24
    • 0032949482 scopus 로고    scopus 로고
    • Batrachochytrium dendrobatidis gen. et sp. nov., a chytrid pathogenic to amphibians
    • Longcore, J.E., Pessier, A.P. & Nichols, D.K. (1999) Batrachochytrium dendrobatidis gen. et sp. nov., a chytrid pathogenic to amphibians. Mycologia, 91, 219-227.
    • (1999) Mycologia , vol.91 , pp. 219-227
    • Longcore, J.E.1    Pessier, A.P.2    Nichols, D.K.3
  • 25
    • 31344435055 scopus 로고    scopus 로고
    • Designing occupancy studies: general advice and allocating survey effort
    • MacKenzie, D.I. & Royle, J.A. (2005) Designing occupancy studies: general advice and allocating survey effort. Journal of Applied Ecology, 42, 1105-1114.
    • (2005) Journal of Applied Ecology , vol.42 , pp. 1105-1114
    • MacKenzie, D.I.1    Royle, J.A.2
  • 28
    • 79960453439 scopus 로고    scopus 로고
    • Improving estimates of occupancy when two forms of observation error occur: non-detection and species misidentification
    • Miller, D.A., Nichols, J.D., McClintock, B.T., Grant, E.H.C., Bailey, L.L. & Wier, L.A. (2011) Improving estimates of occupancy when two forms of observation error occur: non-detection and species misidentification. Ecology, 92, 1422-1428.
    • (2011) Ecology , vol.92 , pp. 1422-1428
    • Miller, D.A.1    Nichols, J.D.2    McClintock, B.T.3    Grant, E.H.C.4    Bailey, L.L.5    Wier, L.A.6
  • 29
    • 70349196033 scopus 로고    scopus 로고
    • Impact and dynamics of disease in species threatened by the amphibian chytrid fungus, Batrachochytrium dendrobatidis
    • Murray, K.A., Skerratt, L.F., Speare, R. & McCallum, H. (2009) Impact and dynamics of disease in species threatened by the amphibian chytrid fungus, Batrachochytrium dendrobatidis. Conservation Biology, 23, 1242-1252.
    • (2009) Conservation Biology , vol.23 , pp. 1242-1252
    • Murray, K.A.1    Skerratt, L.F.2    Speare, R.3    McCallum, H.4
  • 30
    • 77952556013 scopus 로고    scopus 로고
    • How relevant is opportunistic Bd sampling: are we ready for the big picture?
    • Muths, E., Pedersen, B.S. & Pedersen, F.S. (2009) How relevant is opportunistic Bd sampling: are we ready for the big picture? Herpetological Review, 40, 183-184.
    • (2009) Herpetological Review , vol.40 , pp. 183-184
    • Muths, E.1    Pedersen, B.S.2    Pedersen, F.S.3
  • 32
    • 4143068605 scopus 로고    scopus 로고
    • Statistical concepts: assessing spatial distributions
    • eds K.U. Karanth & J.D. Nichols). Centre for Wildlife Studies, Bangalore, India
    • Nichols, J.D. & Karanth, K.U. (2002) Statistical concepts: assessing spatial distributions. Monitoring Tigers and Their Prey (eds K.U. Karanth & J.D. Nichols), pp. 29-38. Centre for Wildlife Studies, Bangalore, India.
    • (2002) Monitoring Tigers and Their Prey , pp. 29-38
    • Nichols, J.D.1    Karanth, K.U.2
  • 33
    • 0001722949 scopus 로고
    • Statistical inference from capture data on closed animal populations
    • Otis, D.L., Burnham, K.P., White, G.C. & Anderson, D.R. (1978) Statistical inference from capture data on closed animal populations. Wildlife Monographs, 62, 1-135.
    • (1978) Wildlife Monographs , vol.62 , pp. 1-135
    • Otis, D.L.1    Burnham, K.P.2    White, G.C.3    Anderson, D.R.4
  • 34
    • 1542320961 scopus 로고    scopus 로고
    • Physiology of Batrachochytrium dendrobatidis, a chytrid pathogen of amphibians
    • Piotrowski, J.S., Annis, S.L. & Longcore, J.E. (2004) Physiology of Batrachochytrium dendrobatidis, a chytrid pathogen of amphibians. Mycologia, 96, 9-15.
    • (2004) Mycologia , vol.96 , pp. 9-15
    • Piotrowski, J.S.1    Annis, S.L.2    Longcore, J.E.3
  • 35
    • 79961135005 scopus 로고    scopus 로고
    • R Development Core Team. R Foundation for Statistical Computing, Vienna, Austria.
    • R Development Core Team. (2011) R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing, Vienna, Austria. http://www.R-project.org.
    • (2011) R: A Language and Environment for Statistical Computing
  • 37
    • 14044252113 scopus 로고    scopus 로고
    • Endemic infection of the amphibian chytrid fungus in a frog community post-decline
    • Retallick, R., McCallum, H. & Speare, R. (2004) Endemic infection of the amphibian chytrid fungus in a frog community post-decline. PLOS Biology, 2, 1-7.
    • (2004) PLOS Biology , vol.2 , pp. 1-7
    • Retallick, R.1    McCallum, H.2    Speare, R.3
  • 38
    • 62949101184 scopus 로고    scopus 로고
    • Analysis of capture-recapture models with individual covariates using data augmentation
    • Royle, J.A. (2009) Analysis of capture-recapture models with individual covariates using data augmentation. Biometrics, 65, 267-274.
    • (2009) Biometrics , vol.65 , pp. 267-274
    • Royle, J.A.1
  • 40
    • 33646159748 scopus 로고    scopus 로고
    • Generalized site occupancy models allowing for false positive and false negative errors
    • Royle, J.A. & Link, W.A. (2006) Generalized site occupancy models allowing for false positive and false negative errors. Ecology, 87, 835-841.
    • (2006) Ecology , vol.87 , pp. 835-841
    • Royle, J.A.1    Link, W.A.2
  • 41
    • 0041813267 scopus 로고    scopus 로고
    • Estimating abundance from repeated presence-absence data or point counts
    • Royle, J.A. & Nichols, J.D. (2003) Estimating abundance from repeated presence-absence data or point counts. Ecology, 84, 777-790.
    • (2003) Ecology , vol.84 , pp. 777-790
    • Royle, J.A.1    Nichols, J.D.2
  • 44
    • 34249725582 scopus 로고    scopus 로고
    • Use of site occupancy models to estimate prevalence of Myxobolus cerebralis infection in trout
    • Thompson, K.G. (2007) Use of site occupancy models to estimate prevalence of Myxobolus cerebralis infection in trout. Journal of Aquatic Animal Health, 19, 8-13.
    • (2007) Journal of Aquatic Animal Health , vol.19 , pp. 8-13
    • Thompson, K.G.1
  • 49
    • 0033453305 scopus 로고    scopus 로고
    • Program MARK: survival estimation from populations of marked animals
    • White, G.C. & Burnham, K.P. (1999) Program MARK: survival estimation from populations of marked animals. Bird Study, 46(Suppl), 120-138.
    • (1999) Bird Study , vol.46 , Issue.SUPPL. , pp. 120-138
    • White, G.C.1    Burnham, K.P.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.