메뉴 건너뛰기




Volumn 983, Issue , 2013, Pages 205-229

N-glycomic and N-glycoproteomic studies in the social amoebae

Author keywords

Dictyostelium; Glycome; Glycoproteome; Glycosylation; Mass spectrometry; Phosphoglycans; Sulfated glycans

Indexed keywords

GLYCAN; GLYCOPEPTIDE; GLYCOPROTEIN; TRACER;

EID: 84874641641     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-62703-302-2_11     Document Type: Article
Times cited : (12)

References (30)
  • 1
    • 13444281918 scopus 로고    scopus 로고
    • The diversity of dolichol-linked precursors to Asn-linked glycans likely results from secondary loss of sets of glycosyltransferases
    • Samuelson J, Banerjee S, Magnelli P, Cui J, Kelleher DJ, Gilmore R, Robbins PW (2005) The diversity of dolichol-linked precursors to Asn-linked glycans likely results from secondary loss of sets of glycosyltransferases. Proc Natl Acad Sci U S A 102:1548-1553
    • (2005) Proc Natl Acad Sci U S A , vol.102 , pp. 1548-1553
    • Samuelson, J.1    Banerjee, S.2    Magnelli, P.3    Cui, J.4    Kelleher, D.J.5    Gilmore, R.6    Robbins, P.W.7
  • 2
    • 0021149977 scopus 로고
    • Glycoprotein biosynthesis in Dictyostelium discoideum: Developmental regulation of the protein-linked glycans
    • Ivatt RL, Das OP, Henderson EJ, Robbins PW (1984) Glycoprotein biosynthesis in Dictyostelium discoideum: Developmental regulation of the protein-linked glycans. Cell 38:561-567
    • (1984) Cell , vol.38 , pp. 561-567
    • Ivatt, R.L.1    Das, O.P.2    Henderson, E.J.3    Robbins, P.W.4
  • 3
  • 4
    • 0022834820 scopus 로고
    • Glycoantigen expression is regulated both temporally and spatially during development in the cellular slime molds Dictyostelium discoideum and D. mucoroides
    • West CM, Erdos GW, Davis R (1986) Glycoantigen expression is regulated both temporally and spatially during development in the cellular slime molds Dictyostelium discoideum and D. mucoroides. Mol Cell Biochem 72:121-140
    • (1986) Mol Cell Biochem , vol.72 , pp. 121-140
    • West, C.M.1    Erdos, G.W.2    Davis, R.3
  • 5
    • 0023179612 scopus 로고
    • The high mannose oligosaccharides of Dictyostelium discoideum glycoproteins contain a novel intersecting N-acetylglucosamine residue
    • Couso R, van Halbeek H, Reinhold V, Kornfeld S (1987) The high mannose oligosaccharides of Dictyostelium discoideum glycoproteins contain a novel intersecting N-acetylglucosamine residue. J Biol Chem 262:4521-4527
    • (1987) J Biol Chem , vol.262 , pp. 4521-4527
    • Couso, R.1    Van Halbeek, H.2    Reinhold, V.3    Kornfeld, S.4
  • 7
    • 80054888723 scopus 로고    scopus 로고
    • A glycan of Psi-factor from Dictyostelium discoideum contains a bisecting-GlcNAc, an intersecting-GlcNAc, and a core a -1,6-fucose
    • Nakagawa M, Tojo H, Fujii S (2011) A glycan of Psi-factor from Dictyostelium discoideum contains a bisecting-GlcNAc, an intersecting-GlcNAc, and a core a -1,6-fucose. Biosci Biotechnol Biochem 75:1964-1970
    • (2011) Biosci Biotechnol Biochem , vol.75 , pp. 1964-1970
    • Nakagawa, M.1    Tojo, H.2    Fujii, S.3
  • 8
    • 77956713757 scopus 로고    scopus 로고
    • Dictyostelium discoideum glycoproteins: Using a model system for organismic glycobiology
    • Montreuil J, Vliegenthart JFG, Schachter H (eds) I.I. Elsevier Science BV
    • Freeze HH (1997) Dictyostelium discoideum glycoproteins: Using a model system for organismic glycobiology. In: Montreuil J, Vliegenthart JFG, Schachter H (eds) Glycoproteins II. Elsevier Science BV, pp 89-121
    • (1997) Glycoproteins , pp. 89-121
    • Freeze, H.H.1
  • 9
    • 40649108313 scopus 로고    scopus 로고
    • Highthroughput solid-phase permethylation of glycans prior to mass spectrometry
    • Kang P, Mechref Y, Novotny MV (2008) Highthroughput solid-phase permethylation of glycans prior to mass spectrometry. Rapid Commun Mass Spectrom 22:721-734
    • (2008) Rapid Commun Mass Spectrom , vol.22 , pp. 721-734
    • Kang, P.1    Mechref, Y.2    Novotny, M.V.3
  • 10
    • 0031596482 scopus 로고    scopus 로고
    • Fucose b -1-P-Ser is a new type of glycosylation: Using antibodies to identify a novel structure in Dictyostelium discoideum and study multiple types of fucosylation during growth and development
    • Srikrishna G, Wang L, Freeze HH (1998) Fucose b -1-P-Ser is a new type of glycosylation: Using antibodies to identify a novel structure in Dictyostelium discoideum and study multiple types of fucosylation during growth and development. Glycobiology 8:799-811
    • (1998) Glycobiology , vol.8 , pp. 799-811
    • Srikrishna, G.1    Wang, L.2    Freeze, H.H.3
  • 11
    • 77949491710 scopus 로고    scopus 로고
    • UDPGlcNAc: Glycoprotein N-acetylglucosamine-1-phosphotransferase mediates the initial step in the formation of the methylphosphomannosyl residues on the high mannose oligosaccharides of Dictyostelium discoideum glycoproteins
    • Qian Y, West CM, Kornfeld S (2011) UDPGlcNAc: Glycoprotein N-acetylglucosamine-1-phosphotransferase mediates the initial step in the formation of the methylphosphomannosyl residues on the high mannose oligosaccharides of Dictyostelium discoideum glycoproteins. Biochem Biophys Res Commun 393:678-681
    • (2011) Biochem Biophys Res Commun , vol.393 , pp. 678-681
    • Qian, Y.1    West, C.M.2    Kornfeld, S.3
  • 12
    • 0021257094 scopus 로고
    • Antigenic determinants shared by lysosomal proteins of Dictyostelium discoideum. Characterization using monoclonal antibodies and isolation of mutations affecting the determinant
    • Knecht DA, Dimond RL, Wheeler S, Loomis WF (1984) Antigenic determinants shared by lysosomal proteins of Dictyostelium discoideum. Characterization using monoclonal antibodies and isolation of mutations affecting the determinant. J Biol Chem 259:10633-10640
    • (1984) J Biol Chem , vol.259 , pp. 10633-10640
    • Knecht, D.A.1    Dimond, R.L.2    Wheeler, S.3    Loomis, W.F.4
  • 13
    • 0024727903 scopus 로고
    • Characteristics of the sulfation of N-linked oligosaccharides in vesicles from Dictyostelium discoideum: In vitro sulfation of lysosomal enzymes
    • Lacoste CH, Freeze HH, Jones JA, Kaplan A (1989) Characteristics of the sulfation of N-linked oligosaccharides in vesicles from Dictyostelium discoideum: In vitro sulfation of lysosomal enzymes. Arch Biochem Biophys 273:505-515
    • (1989) Arch Biochem Biophys , vol.273 , pp. 505-515
    • Lacoste, C.H.1    Freeze, H.H.2    Jones, J.A.3    Kaplan, A.4
  • 14
    • 0026744108 scopus 로고
    • A novel pathway for phosphorylated oligosaccharide biosynthesis. Identification of an oligosaccharide-specific phosphate methyltransferase in Dictyostelium discoideum
    • Freeze HH, Hindsgaul O, Ichikawa M (1992) A novel pathway for phosphorylated oligosaccharide biosynthesis. Identification of an oligosaccharide-specific phosphate methyltransferase in Dictyostelium discoideum. J Biol Chem 267:4431-4439
    • (1992) J Biol Chem , vol.267 , pp. 4431-4439
    • Freeze, H.H.1    Hindsgaul, O.2    Ichikawa, M.3
  • 15
    • 0026077198 scopus 로고
    • Developmental regulation of processing a -mannosidases and "intersecting" N-acetylglucosaminyltransferase in Dictyostelium discoideum
    • Sharkey DJ, Kornfeld R (1991) Developmental regulation of processing a -mannosidases and "intersecting" N-acetylglucosaminyltransferase in Dictyostelium discoideum. J Biol Chem 266:18477-18484
    • (1991) J Biol Chem , vol.266 , pp. 18477-18484
    • Sharkey, D.J.1    Kornfeld, R.2
  • 16
    • 17644423310 scopus 로고    scopus 로고
    • Glycosyltransferase genomics in Dictyostelium discoideum
    • Loomis WF, Kuspa A (eds). Horizon Scienti fi c Press, Norfolk
    • West CM, van der Wel H, Coutinho PM, Henrissat B (2005) Glycosyltransferase genomics in Dictyostelium discoideum. In: Loomis WF, Kuspa A (eds) Dictyostelium genomics. Horizon Scienti fi c Press, Norfolk, pp 235-264
    • (2005) Dictyostelium genomics , pp. 235-264
    • West, C.M.1    Van Der Wel, H.2    Coutinho, P.M.3    Henrissat, B.4
  • 19
    • 77954355356 scopus 로고    scopus 로고
    • Glycopeptidome of a heavily N-glycosylated cell surface glycoprotein of Dictyostelium implicated in cell adhesion
    • Feasley CL, Johnson JM, West CM, Chia CP (2010) Glycopeptidome of a heavily N-glycosylated cell surface glycoprotein of Dictyostelium implicated in cell adhesion. J Proteome Res 9:3495-510
    • (2010) J Proteome Res , vol.9 , pp. 3495-3510
    • Feasley, C.L.1    Johnson, J.M.2    West, C.M.3    Chia, C.P.4
  • 20
    • 62349120127 scopus 로고    scopus 로고
    • Generation and analysis of multidimensional protein identification technology datasets
    • Swanson SK, Florens L, Washburn MP (2009) Generation and analysis of multidimensional protein identification technology datasets. Methods Mol Biol 492:1-20
    • (2009) Methods Mol Biol , vol.492 , pp. 1-20
    • Swanson, S.K.1    Florens, L.2    Washburn, M.P.3
  • 21
    • 15944400345 scopus 로고    scopus 로고
    • Fluorophore-assisted carbohydrate electrophoresis: A sensitive and accurate method for the direct analysis of dolichol pyrophosphatelinked oligosaccharides in cell cultures and tissues
    • Gao N (2005) Fluorophore-assisted carbohydrate electrophoresis: A sensitive and accurate method for the direct analysis of dolichol pyrophosphatelinked oligosaccharides in cell cultures and tissues. Methods 35:323-327
    • (2005) Methods , vol.35 , pp. 323-327
    • Gao, N.1
  • 22
    • 0021308647 scopus 로고
    • Reexamination of the pyridylamination used for fl uorescence labeling of oligosaccharides and its application to glycoproteins
    • Hase S, Ibuki T, Ikenaka T (1984) Reexamination of the pyridylamination used for fl uorescence labeling of oligosaccharides and its application to glycoproteins. J Biochem 95:197-203
    • (1984) J Biochem , vol.95 , pp. 197-203
    • Hase, S.1    Ibuki, T.2    Ikenaka, T.3
  • 24
    • 0347064294 scopus 로고    scopus 로고
    • Elimination of oxidative degradation during the per-O-methylation of carbohydrates
    • Ciucanu I, Costello CE (2003) Elimination of oxidative degradation during the per-O-methylation of carbohydrates. J Am Chem Soc 125:16213-16219
    • (2003) J Am Chem Soc , vol.125 , pp. 16213-16219
    • Ciucanu, I.1    Costello, C.E.2
  • 25
    • 0021459706 scopus 로고
    • Presence of a nonlysosomal endo- b -N-acetylglucosaminidase in the cellular slime mold Dictyostelium discoideum
    • Freeze HH, Etchison JR (1984) Presence of a nonlysosomal endo- b -N-acetylglucosaminidase in the cellular slime mold Dictyostelium discoideum. Arch Biochem Biophys 232: 414-421
    • (1984) Arch Biochem Biophys , vol.232 , pp. 414-421
    • Freeze, H.H.1    Etchison, J.R.2
  • 26
    • 66449099328 scopus 로고    scopus 로고
    • Streptococcus pneumoniae endohexosaminidase D, structural and mechanistic insight into substrate-assisted catalysis in family 85 glycoside hydrolases
    • Abbott DW, Macauley MS, Vocadlo DJ, Boraston AB (2009) Streptococcus pneumoniae endohexosaminidase D, structural and mechanistic insight into substrate-assisted catalysis in family 85 glycoside hydrolases. J Biol Chem 284:11676-11689
    • (2009) J Biol Chem , vol.284 , pp. 11676-11689
    • Abbott, D.W.1    Macauley, M.S.2    Vocadlo, D.J.3    Boraston, A.B.4
  • 27
    • 77951241005 scopus 로고    scopus 로고
    • Identification, characterization, and biosynthesis of a novel N-glycan modi fi cation in the fruiting body of the basidiomycete Coprinopsis cinerea
    • Buser R, Lazar Z, Käser S, Künzler M, Aebi M (2010) Identification, characterization, and biosynthesis of a novel N-glycan modi fi cation in the fruiting body of the basidiomycete Coprinopsis cinerea. J Biol Chem 285:10715-10723
    • (2010) J Biol Chem , vol.285 , pp. 10715-10723
    • Buser, R.1    Lazar, Z.2    Käser, S.3    Künzler, M.4    Aebi, M.5
  • 28
    • 0023948708 scopus 로고
    • Analyses of N-linked oligosaccharides using a two-dimensional mapping technique
    • Tomiya N, Awaya J, Kurono M, Endo S, Arata Y, Takahashi N (1988) Analyses of N-linked oligosaccharides using a two-dimensional mapping technique. Anal Biochem 171:73-90
    • (1988) Anal Biochem , vol.171 , pp. 73-90
    • Tomiya, N.1    Awaya, J.2    Kurono, M.3    Endo, S.4    Arata, Y.5    Takahashi, N.6
  • 29
    • 79958081552 scopus 로고    scopus 로고
    • Presence of galactosylated core fucose on N-glycans in the planaria Dugesia japonica
    • Paschinger K, Razzazi-Fazeli E, Furukawa K, Wilson IBH (2011) Presence of galactosylated core fucose on N-glycans in the planaria Dugesia japonica. J Mass Spectrom 46:561-567
    • (2011) J Mass Spectrom , vol.46 , pp. 561-567
    • Paschinger, K.1    Razzazi-Fazeli, E.2    Furukawa, K.3    Wilson, I.B.H.4
  • 30
    • 33846457358 scopus 로고    scopus 로고
    • N-glycans of the porcine nematode parasite Ascaris suum are modi fi ed with phosphorylcholine and core fucose residues
    • Pöltl G, Kerner D, Paschinger K, Wilson IBH (2007) N-glycans of the porcine nematode parasite Ascaris suum are modi fi ed with phosphorylcholine and core fucose residues. FEBS J 274:714-726
    • (2007) FEBS J , vol.274 , pp. 714-726
    • Pöltl, G.1    Kerner, D.2    Paschinger, K.3    Wilson, I.B.H.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.