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Volumn 31, Issue 2, 2013, Pages 470-476

Identification of a Coding Sequence and Structure Modeling of a Glycine-Rich RNA-Binding Protein (CmGRP1) from Chelidonium majus L.

Author keywords

3D model; Chelidonium majus; Coding sequence; Glycine rich protein; Papaveraceae; RNA binding

Indexed keywords

CHELIDONIUM; CHELIDONIUM MAJUS; EMBRYOPHYTA; IVA; PAPAVERACEAE; TRACHEOPHYTA;

EID: 84874532708     PISSN: 07359640     EISSN: 15729818     Source Type: Journal    
DOI: 10.1007/s11105-012-0510-y     Document Type: Article
Times cited : (13)

References (29)
  • 1
    • 0031890522 scopus 로고    scopus 로고
    • Plant proteins containing the RNA-recognition motif
    • Albà MM, Pagès M (1998) Plant proteins containing the RNA-recognition motif. Trends Plant Sci 3: 15-21.
    • (1998) Trends Plant Sci , vol.3 , pp. 15-21
    • Albà, M.M.1    Pagès, M.2
  • 3
    • 0034658414 scopus 로고    scopus 로고
    • Characterization of cDNAs encoding two glycine-rich proteins in chickpea (Cicer arietinum L.): accumulation in response to fungal infection and other stress factors
    • Cornels H, Ichinose Y, Barz W (2000) Characterization of cDNAs encoding two glycine-rich proteins in chickpea (Cicer arietinum L.): accumulation in response to fungal infection and other stress factors. Plant Sci 154: 83-88.
    • (2000) Plant Sci , vol.154 , pp. 83-88
    • Cornels, H.1    Ichinose, Y.2    Barz, W.3
  • 4
    • 77955391393 scopus 로고    scopus 로고
    • The HADDOCK web server for data-driven biomolecular docking
    • de Vries SJ, van Dijk M, Bonvin AMJJ (2010) The HADDOCK web server for data-driven biomolecular docking. Nat Protocol 5: 883-897.
    • (2010) Nat Protocol , vol.5 , pp. 883-897
    • de Vries, S.J.1    van Dijk, M.2    Bonvin, A.M.J.J.3
  • 5
    • 0033769358 scopus 로고    scopus 로고
    • Characterization of proteins in latex of the opium poppy (Papaver somniferum) using two-dimensional gel electrophoresis and microsequencing
    • Decker G, Wanner G, Zenk MH, Lottspeich F (2000) Characterization of proteins in latex of the opium poppy (Papaver somniferum) using two-dimensional gel electrophoresis and microsequencing. Electrophoresis 21: 3500-3516.
    • (2000) Electrophoresis , vol.21 , pp. 3500-3516
    • Decker, G.1    Wanner, G.2    Zenk, M.H.3    Lottspeich, F.4
  • 8
    • 77953009768 scopus 로고    scopus 로고
    • Glycine-rich RNA-binding proteins are functionally conserved in Arabidopsis thaliana and Oryza sativa during cold adaptation process
    • Kim JY, Kim WY, Kwak KJ, Oh SH, Han YS, Kang H (2010) Glycine-rich RNA-binding proteins are functionally conserved in Arabidopsis thaliana and Oryza sativa during cold adaptation process. J Exp Bot 61: 2317-2325.
    • (2010) J Exp Bot , vol.61 , pp. 2317-2325
    • Kim, J.Y.1    Kim, W.Y.2    Kwak, K.J.3    Oh, S.H.4    Han, Y.S.5    Kang, H.6
  • 9
    • 0242362160 scopus 로고    scopus 로고
    • A "FRankenstein's monster" approach to comparative modeling: merging the finest fragments of Fold-Recognition models and iterative model refinement aided by 3D structure evaluation
    • Kosinski J, Cymerman IA, Feder M, Kurowski MA, Sasin JM, Bujnicki JM (2003) A "FRankenstein's monster" approach to comparative modeling: merging the finest fragments of Fold-Recognition models and iterative model refinement aided by 3D structure evaluation. Proteins 53(Suppl 6): 369-379.
    • (2003) Proteins , vol.53 , Issue.SUPPL. 6 , pp. 369-379
    • Kosinski, J.1    Cymerman, I.A.2    Feder, M.3    Kurowski, M.A.4    Sasin, J.M.5    Bujnicki, J.M.6
  • 11
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment
    • Kumar S, Tamura K, Nei M (2004) MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5: 150-163.
    • (2004) Brief Bioinform , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 12
    • 0043123216 scopus 로고    scopus 로고
    • GeneSilico protein structure prediction meta-server
    • Kurowski MA, Bujnicki JM (2003) GeneSilico protein structure prediction meta-server. Nucleic Acids Res 31: 3305-3307.
    • (2003) Nucleic Acids Res , vol.31 , pp. 3305-3307
    • Kurowski, M.A.1    Bujnicki, J.M.2
  • 13
    • 63549135467 scopus 로고    scopus 로고
    • Role of plant RNA-binding proteins in development, stress response and genome organization
    • Lorković ZJ (2009) Role of plant RNA-binding proteins in development, stress response and genome organization. Trends Plant Sci 14: 229-236.
    • (2009) Trends Plant Sci , vol.14 , pp. 229-236
    • Lorković, Z.J.1
  • 15
    • 77952549857 scopus 로고    scopus 로고
    • Functional diversity of the plant glycine-rich proteins superfamily
    • Mangeon A, Junqueira RM, Sachetto-Martins G (2010) Functional diversity of the plant glycine-rich proteins superfamily. Plant Signal Behav 5: 99-104.
    • (2010) Plant Signal Behav , vol.5 , pp. 99-104
    • Mangeon, A.1    Junqueira, R.M.2    Sachetto-Martins, G.3
  • 17
    • 19944413670 scopus 로고    scopus 로고
    • Glycine-rich proteins: a class of novel proteins
    • Mousavi A, Hotta Y (2005) Glycine-rich proteins: a class of novel proteins. Appl Biochem Biotechnol 120: 169-174.
    • (2005) Appl Biochem Biotechnol , vol.120 , pp. 169-174
    • Mousavi, A.1    Hotta, Y.2
  • 18
    • 34249935508 scopus 로고    scopus 로고
    • Proteomic analysis of Chelidonium majus milky sap using two-dimensional gel electrophoresis and tandem mass spectrometry
    • Nawrot R, Kalinowski A, Gozdzicka-Jozefiak A (2007) Proteomic analysis of Chelidonium majus milky sap using two-dimensional gel electrophoresis and tandem mass spectrometry. Phytochemistry 68: 1612-1622.
    • (2007) Phytochemistry , vol.68 , pp. 1612-1622
    • Nawrot, R.1    Kalinowski, A.2    Gozdzicka-Jozefiak, A.3
  • 19
    • 1042268308 scopus 로고    scopus 로고
    • Cloning and characterization of glycine-rich RNA-binding protein cDNAs in the moss Physcomitrella patens
    • Nomata T, Kabeya Y, Sato N (2004) Cloning and characterization of glycine-rich RNA-binding protein cDNAs in the moss Physcomitrella patens. Plant Cell Physiol 45: 48-56.
    • (2004) Plant Cell Physiol , vol.45 , pp. 48-56
    • Nomata, T.1    Kabeya, Y.2    Sato, N.3
  • 20
    • 0033674821 scopus 로고    scopus 로고
    • Characterization and cDNA cloning of two glycine- and histidine-rich antimicrobial peptides from the roots of shepherd's purse, Capsella bursa-pastoris
    • Park CJ, Park CB, Hong SS, Lee HS, Lee SY, Kim SC (2000) Characterization and cDNA cloning of two glycine- and histidine-rich antimicrobial peptides from the roots of shepherd's purse, Capsella bursa-pastoris. Plant Mol Biol 44: 187-197.
    • (2000) Plant Mol Biol , vol.44 , pp. 187-197
    • Park, C.J.1    Park, C.B.2    Hong, S.S.3    Lee, H.S.4    Lee, S.Y.5    Kim, S.C.6
  • 22
    • 84868153105 scopus 로고    scopus 로고
    • Biochemical and bioinformatic characterization of type II metacaspase protein (TaeMCAII) from wheat
    • doi: 10. 1007/s11105-012-0450-6
    • Piszczek E, Dudkiewicz M, Mielecki M (2012) Biochemical and bioinformatic characterization of type II metacaspase protein (TaeMCAII) from wheat. Plant Mol Biol Rep. doi: 10. 1007/s11105-012-0450-6.
    • (2012) Plant Mol Biol Rep
    • Piszczek, E.1    Dudkiewicz, M.2    Mielecki, M.3
  • 23
    • 0034798934 scopus 로고    scopus 로고
    • Glycine-rich proteins as structural components of plant cell walls
    • Ringli C, Keller B, Ryser U (2001) Glycine-rich proteins as structural components of plant cell walls. Cell Mol Life Sci 58: 1430-1441.
    • (2001) Cell Mol Life Sci , vol.58 , pp. 1430-1441
    • Ringli, C.1    Keller, B.2    Ryser, U.3
  • 24
    • 0034697796 scopus 로고    scopus 로고
    • Plant glycine-rich proteins: a family or just proteins with a common motif?
    • Sachetto-Martins G, Franco LO, de Oliveira DE (2000) Plant glycine-rich proteins: a family or just proteins with a common motif? Biochim Biophys Acta 1492: 1-14.
    • (2000) Biochim Biophys Acta , vol.1492 , pp. 1-14
    • Sachetto-Martins, G.1    Franco, L.O.2    de Oliveira, D.E.3
  • 25
    • 77950903733 scopus 로고    scopus 로고
    • A proteomic analysis of oligo(dT)-bound mRNP containing oxidative stress-induced Arabidopsis thaliana RNA-binding proteins ATGRP7 and ATGRP8
    • Schmidt F, Marnef A, Cheung MK, Wilson I, Hancock J, Staiger D, Ladomery M (2009) A proteomic analysis of oligo(dT)-bound mRNP containing oxidative stress-induced Arabidopsis thaliana RNA-binding proteins ATGRP7 and ATGRP8. Mol Biol Rep 37: 839-845.
    • (2009) Mol Biol Rep , vol.37 , pp. 839-845
    • Schmidt, F.1    Marnef, A.2    Cheung, M.K.3    Wilson, I.4    Hancock, J.5    Staiger, D.6    Ladomery, M.7
  • 26
    • 0037406141 scopus 로고    scopus 로고
    • Can correct protein models be identified?
    • Wallner B, Elofsson A (2003) Can correct protein models be identified? Protein Sci 12: 1073-1086.
    • (2003) Protein Sci , vol.12 , pp. 1073-1086
    • Wallner, B.1    Elofsson, A.2
  • 27
    • 0035153840 scopus 로고    scopus 로고
    • Structural basis for recognition of AU-rich element RNA by the HuD protein
    • Wang X, Tanaka Hall TM (2001) Structural basis for recognition of AU-rich element RNA by the HuD protein. Nat Struct Biol 8: 141-145.
    • (2001) Nat Struct Biol , vol.8 , pp. 141-145
    • Wang, X.1    Tanaka Hall, T.M.2
  • 28
    • 79251634972 scopus 로고    scopus 로고
    • Isolation and characterization of a novel drought responsive gene encoding a glycine-rich RNA-binding protein in Malus prunifolia (Willd.) Borkh
    • Wang S, Liang D, Shi S, Ma F, Shu H, Wang R (2011) Isolation and characterization of a novel drought responsive gene encoding a glycine-rich RNA-binding protein in Malus prunifolia (Willd.) Borkh. Plant Mol Biol Rep 29: 125-134.
    • (2011) Plant Mol Biol Rep , vol.29 , pp. 125-134
    • Wang, S.1    Liang, D.2    Shi, S.3    Ma, F.4    Shu, H.5    Wang, R.6
  • 29
    • 79958714815 scopus 로고    scopus 로고
    • Expression profile of early responsive genes under salt stress in upland cotton (Gossypium hirsutum L.)
    • Zhang X, Zhen JB, Li ZH, Kang DM, Yang YM, Kong J, Hua JP (2011) Expression profile of early responsive genes under salt stress in upland cotton (Gossypium hirsutum L.). Plant Mol Biol Rep 29: 626-637.
    • (2011) Plant Mol Biol Rep , vol.29 , pp. 626-637
    • Zhang, X.1    Zhen, J.B.2    Li, Z.H.3    Kang, D.M.4    Yang, Y.M.5    Kong, J.6    Hua, J.P.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.