Surface fluid registration and multivariate tensor-based morphometry in newborns - The effects of prematurity on the putamen

2012 Conference Handbook - Asia-Pacific Signal and Information Processing Association Annual Summit and Conference, APSIPA ASC 2012

Volumn , Issue , 2012, Pages

  Shi, Jie ^a   Wang, Yalin ^a   Ceschin, Rafael ^b   An, Xing ^a   Nelson, Marvin D ^c   Panigrahy, Ashok ^b   Leporé, Natasha ^c  

^a Arizona State University   (United States)

^b CHILDREN S HOSPITAL OF PITTSBURGH   (United States)

^c UNIVERSITY OF SOUTHERN CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ALZHEIMER'S DISEASE; AUTOMATIC TOOLS; DISEASE DETECTION; FLUID REGISTRATION; GROUP DIFFERENCES; HARMONIC MAP; HIV/AIDS; MRI IMAGE; SHAPE CHANGE; STATISTICAL COMPARISONS; SUBCORTICAL STRUCTURES; TENSOR-BASED MORPHOMETRY; TWO WAYS;

ALGORITHMS; DATA PROCESSING; TENSORS;

SIGNAL DETECTION;

EID: 84874420205     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: None     Document Type: Conference Paper

References (40)

1. Aris R, Vectors, tensors, and the basic equations of fluid mechanics, Dover, 1989
2. Arsigny V, Fillard P, Pennec X, Ayache N. Log-Euclidean metrics for fast and simple calculus on diffusion tensors. Magn Reson Med 56 (2):411-421, 2006
3. Boardman JP, Counsell SJ, Rueckert D, Kapellou O, Bhatia KK, Aljabar P, Hajnal J, Allsop JM, Rutherford MA, Edward AD, Abnormal deep grey matter development following preterm birth detected using deformation-based morphometry. NeuroImage 32(1):70-78, 2006
4. Bro-Nielsen M, Gramkow C. Fast fluid registration of medical images, Proceedings of the 4th International Conference on Visualization in Biomedical Computing, Hamburg, Germany. September 22-25:267-276, 1996
5. Chiang MC, Leow AD, Klunder AD, Dutton RA, Barysheva M, Rose SE, McMahon KL, de Zubicaray GI, Toga AW, Thompson PM. Fluid registration of diffusion tensor images using information theory. IEEE Trans Med Imaging 27:442-456, 2008
6. Christensen GE, Rabbitt RD, Miller MI. Deformable templates using large deformation kinematics, IEEE Trans. Image Process. 5:1435-1447, 1996
7. Christensen GE, Johnson HJ. Consistent image registration. IEEE Trans Med Imaging 20:568-582, 2001
8. D'Agostino E, Maes F, Vandermeulen D, Suetens P. A viscous fluid model for multimodal non-rigid image registration using mutual information. Med Image Anal 7:565-575, 2003
9. Fischl B, Sereno MI, Dale AM. Cortical Surface-Based Analysis II: Inflation, Flattening, and a Surface-Based Coordinate System. Neuroimage 9:195-207, 1999
10. Hermosillo G. Variational methods for multimodal image matching. PhD thesis, Université de Nice (INRIA-ROBOTVIS), Sophia Antipolis, France. 2002
11. Hotelling H. The generalization of Student's ratio. Ann Math Statist 2:360-378, 1931
12. Kim B, Boes JL, Frey KA, Meyer CR. Mutual information for automated unwarping of rat brain autoradiographs. Neuroimage 5:31-40, 1997
13. Leow A, Huang SC, Geng A, Becker J, Davis S, Toga A, Thompson P. Inverse consistent mapping in 3D deformable image registration: its construction and statistical properties. Inf Process Med Imaging 19:493-503, 2005
14. Lepore N, Brun C, Chou YY, Chiang MC, Dutton RA, Hayashi KM, Luders E, Lopez OL, Aizenstein HJ, Toga AW, Becker JT, Thompson PM. Generalized tensor-based morphometry of HIV/AIDS using multivariate statistics on deformation tensors. IEEE Trans Med Imag 27 (1):129-141, 2008
15. Lui LM, Wang Y, Chan TF. Solving PDEs on Manifolds with Global Conformal Parametriazation. Variational, Geometric, and Level Set Methods in Computer Vision:307-319, 2005
16. Mercuri E, Atkinson J, Braddick O, Anker S, Cowan F, Rutherford M, Pennock J, Dubowitz L. Basal ganglia damage and impaired visual function in the newborn infant. Archives of Disease in Childhood 77:F111?F114 1997
17. Meyer CR, Boes JL, Kim B, Bland PH, Zasadny KR, Kison PV, Koral K, Frey KA, Wahl RL. Demonstration of accuracy and clinical versatility of mutual information for automatic multimodality image fusion using affine and thin-plate spline warped geometric deformations. Med Image Anal 1:195-206, 1997
18. Nichols TE, Holmes AP. Non parametric permutation tests for functional neuroimaging: a primer with examples. Hum Brain Mapp 25 (1):1-25, 2009
19. Nosarti C, Giouroukou E, Healy E, Rifkin L, Walshe M, Reichenberg A, Chitnis X, Williams SCR, Murray RM. Grey and white matter distribution in very preterm adolescents mediates neurodevelopmental outcome. Brain 131:205-217, 2008
20. Pizer S, Fritsch D, Yushkevich P, Johnson V, Chaney E. Segmentation, registration, and measurement of shape variation via image object shape. IEEE Trans Med Imag 18 (10):851-865, 1999
21. Rueckert D, Sonoda LI, Hayes C, Hill DL, Leach MO, Hawkes DJ. Nonrigid registration using free-form deformations: application to breast MR images. IEEE Trans Med Imaging 18:712-721, 1999
22. Shi J, Thompson PM, Gutman B, Wang Y, Surface Fluid Registration of Conformal Representation: Application to Detect Disease Burden and Genetic Influence on the Hippocampus, NeuroImage, submitted, 2012
23. Sobel LJ, Bansal R, Maia TV, Sanchez J, Mazzone L, Durkin K, Liu J, Hao X, Ivanov I, Miller A, Greenhill LL, Peterson BS, Basal Ganglia Surface Morphology and the Effects of Stimulant Medications in Youth With Attention Deficit Hyperactivity Disorder, Am J Psychiatry 167:977-986, 2010
24. Stam J. Flows on Surfaces of Arbitrary Topology. Proceedings of SIGGRAPH, 724-731, 2003
25. Styner M, Lieberman JA, McClure RK, Weinberger DR, Jones DW, Gerig G. Morphometric analysis of lateral ventricles in schizophrenia and healthy controls regarding genetic and disease-specific factors. Proc. Natl. Acad. Sci. U. S. A. 102(13):4872-4877, 2005
26. Thompson PM, Giedd JN, Woods RP, MacDonald D, Evans AC, Toga AW. Growth Patterns in the Developing Human Brain Detected Using Continuum-Mechanical Tensor Mapping. Nature 404:190-193, 2000
27. Thompson PM, Hayashi KM, de Zubicaray GI, Janke AL, Rose SE, Semple J, Hong MS, Herman D, Gravano D, Doddrell DM, Toga AW. Mapping hippocampal and ventricular change in Alzheimer's disease. NeuroImage 22:1754-1766, 2004
28. Thompson PM, Hayashi KM, Sowell ER, Gogtay N, Giedd JN, Rapoport JL, de Zubicaray GI, Janke AL, Rose SE, Semple J, Doddrell DM, Wang Y, van Erp TGM, Cannon TD, Toga AW. Mapping cortical change in Alzheimer's disease, brain development, and schizophrenia. NeuroImage 23(Supplement 1): S2-S18, 2004
29. Voorn P, Vanderschuren LJMJ, Groenewegen HJ, Robbins TW, Pennartz CMA. Putting a spin on the dorsal?ventral divide of the striatum, Trends in Neurosciences 27(8):468-474 (2004)
30. Wang Y, Chiang MC, Thompson PM. Mutual Information-based 3D Surface Matching with Applications to Face Recognition and Brain Mapping. Proceedings ICCV, 527-534, 2005
31. Wang Y, Lui LM, Gu X, Hayashi KM, Chan TF, Toga AW, Thompson PM, Yau ST. Brain surface conformal parameterization using Riemann surface structure. IEEE Trans Med Imag 26(6):853-865, 2007
32. Wang Y, Dai W, Gu X, Chan TF, Yau ST, Toga AW, et al. Teichmller Shape Space Theory and Its Application to Brain Morphometry, Proceedings MICCAI, 133-140, 2009
33. Wang Y, Zhang J, Gutman B, Chan TF, Becker JT, Aizenstein HJ, Lopez OL, Tamburo RJ, Toga AW, Thompson PM. Multivariate Tensor-based Morphometry on Surfaces: Application to Mapping Ventricular Abnormalities in HIV/AIDS. NeuroImage 49, 2141-2157, 2010
34. Wang Y, Song Y, Rajagopalan P, An T, Liu K, Chou YY, Gutman B, Toga AW, Thompson PM. Surface-based TBM boosts power to detect disease effects on the brain: An N=804 ADNI study. Neuroimage 56(4):1993-2010, 2011b
35. Wang Y, Panigrahy A, Shi J, Ceschin R, Nelson MD, Gutman B, Thompson PM, Lepore N. Surface Multivariate Tensor-based Morphometry on Premature Neonates: A Pilot Study. MICCAI workshop on Image Analysis of Human Brain Development, Toronto, Canada, September 22, 2011c
36. Wang, Y., http://gsl.lab.asu.edu/conformal.htm, 2011a
37. Wang Y, Panigrahy A, Shi J, Ceschin R, Nie Z, Nelson MD, Lepore N. 3D vs. 2D Surface Shape Analysis of the Corpus Callosum in Premature Neonates. MICCAI Workshop on Perinatal and Paediatric Imaging, Nice, France, Oct 1, 2012
38. Wang Y, Panigrahy A, Shi J, Ceschin R, Nelson MD, Gutsman B, Thompson PM, Lepore N. Ventricular and thalamic surface morphometry in premature neonates, submitted to Neuroimage, 2012
39. West J, Fitzpatrick JM, Wang MY, Dawant BM, Maurer CR Jr, Kessler RM, Maciunas RJ, Barillot C, Lemoine D, Collignon A, Maes F, Suetens P, Vandermeulen D, van den Elsen PA, Napel S, Sumanaweera TS, Harkness B, Hemler PF, Hill DL, Hawkes DJ, Studholme C, Maintz JB, Viergever MA, Malandain G, Woods RP, et al. Comparison and evaluation of retrospective intermodality brain image registration techniques. J Comput Assist Tomogr 21:554-566, 1997
40. Yushkevich PA, Piven J, Hazlett HC, Smith RG, Ho S, Gee JC, Gerig G. User-guided 3D active contour segmentation of anatomical structures: Significantly improved efficiency and reliability. NeuroImage 31(3):1116-1128, 2006