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Volumn 126, Issue 3, 2013, Pages 693-710

Marker-trait associations in Virginia Tech winter barley identified using genome-wide mapping

Author keywords

[No Author keywords available]

Indexed keywords

AGRICULTURAL ROBOTS; FUNGI; GENES;

EID: 84874342585     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00122-012-2011-7     Document Type: Article
Times cited : (60)

References (66)
  • 2
    • 84874294560 scopus 로고    scopus 로고
    • Association mapping of quantitative trait loci in spring wheat landraces conferring resistance to bacterial leaf streak and spot blotch
    • Adhikari T, Gurung S, Hansen J, Jackson E, Bonman J (2012) Association mapping of quantitative trait loci in spring wheat landraces conferring resistance to bacterial leaf streak and spot blotch. Plant Genome 5: 1-16.
    • (2012) Plant Genome , vol.5 , pp. 1-16
    • Adhikari, T.1    Gurung, S.2    Hansen, J.3    Jackson, E.4    Bonman, J.5
  • 3
    • 0029140637 scopus 로고
    • Localization of quantitative trait loci (QTL) for agronomic important characters by the use of a RFLP map in barley (Hordeum vulgare L.)
    • Backes G, Graner A, Foroughi-Wehr B, Fischbeck G, Wenzel G, Jahoor A (1995) Localization of quantitative trait loci (QTL) for agronomic important characters by the use of a RFLP map in barley (Hordeum vulgare L.). Theor Appl Genet 90: 294-302.
    • (1995) Theor Appl Genet , vol.90 , pp. 294-302
    • Backes, G.1    Graner, A.2    Foroughi-Wehr, B.3    Fischbeck, G.4    Wenzel, G.5    Jahoor, A.6
  • 4
    • 0000895796 scopus 로고
    • Discoloration of dough for oriental noodles
    • Baik B-K, Czuchajowska Z, Pomeranz Y (1995) Discoloration of dough for oriental noodles. Cereal Chem 72(291): 296.
    • (1995) Cereal Chem , vol.72 , Issue.291 , pp. 296
    • Baik, B.-K.1    Czuchajowska, Z.2    Pomeranz, Y.3
  • 5
    • 13444269543 scopus 로고    scopus 로고
    • Haploview: analysis and visualization of LD and haplotype maps
    • Barrett J, Fry B, Maller J, Daly M (2005) Haploview: analysis and visualization of LD and haplotype maps. Bioinformatics 21: 263-265.
    • (2005) Bioinformatics , vol.21 , pp. 263-265
    • Barrett, J.1    Fry, B.2    Maller, J.3    Daly, M.4
  • 6
    • 9744275377 scopus 로고
    • Relationship among barley, malt and beer phenolics
    • Bendelow V, LaBerge D (1979) Relationship among barley, malt and beer phenolics. J Am Soc Brew Chem 37: 89-90.
    • (1979) J Am Soc Brew Chem , vol.37 , pp. 89-90
    • Bendelow, V.1    LaBerge, D.2
  • 7
    • 0032871713 scopus 로고    scopus 로고
    • The potential of hull-less barley
    • Bhatty R (1999) The potential of hull-less barley. Cereal Chem 76(5): 589-599.
    • (1999) Cereal Chem , vol.76 , Issue.5 , pp. 589-599
    • Bhatty, R.1
  • 10
    • 0033772177 scopus 로고    scopus 로고
    • Genes governing resistance to Puccinia hordei in thirteen spring barley accessions
    • Brooks W, Griffey C, Steffenson B, Vivar H (2000) Genes governing resistance to Puccinia hordei in thirteen spring barley accessions. Phytopathology 90: 1131-1136.
    • (2000) Phytopathology , vol.90 , pp. 1131-1136
    • Brooks, W.1    Griffey, C.2    Steffenson, B.3    Vivar, H.4
  • 12
    • 0141794112 scopus 로고    scopus 로고
    • Genetic relationship between kernel discoloration and grain protein concentration in barley
    • Canci P, Nduulu L, Dill-Macky R, Muehlbauer G, Rasmusson D, Smith K (2003) Genetic relationship between kernel discoloration and grain protein concentration in barley. Crop Sci 43: 1671-1679.
    • (2003) Crop Sci , vol.43 , pp. 1671-1679
    • Canci, P.1    Nduulu, L.2    Dill-Macky, R.3    Muehlbauer, G.4    Rasmusson, D.5    Smith, K.6
  • 13
    • 0034887984 scopus 로고    scopus 로고
    • Genetic analysis of a hulless x covered cross of barley using double haploid lines
    • Choo T-M, Ho K, Martin R (2001) Genetic analysis of a hulless x covered cross of barley using double haploid lines. Crop Sci 41: 1021-1026.
    • (2001) Crop Sci , vol.41 , pp. 1021-1026
    • Choo, T.-M.1    Ho, K.2    Martin, R.3
  • 15
  • 16
    • 0001579786 scopus 로고
    • Localization of the Laevigatum powdery mildew resistance to barley chromosome 2 by the use of RFLP markers
    • Giese H, Holm-Jensen A, Jensen H, Jensen J (1993) Localization of the Laevigatum powdery mildew resistance to barley chromosome 2 by the use of RFLP markers. Theor Appl Genet 85: 897-900.
    • (1993) Theor Appl Genet , vol.85 , pp. 897-900
    • Giese, H.1    Holm-Jensen, A.2    Jensen, H.3    Jensen, J.4
  • 18
    • 84866152134 scopus 로고    scopus 로고
    • Association mapping of malting quality quantitative trait loci in barley: positive signal from small germplasm arrays
    • Gutierrez L, Cuesta-Marcos A, Castro A, von Zitzewitz J, Schmitt M, Hayes P (2011) Association mapping of malting quality quantitative trait loci in barley: positive signal from small germplasm arrays. Plant Genome 4: 256-272.
    • (2011) Plant Genome , vol.4 , pp. 256-272
    • Gutierrez, L.1    Cuesta-Marcos, A.2    Castro, A.3    von Zitzewitz, J.4    Schmitt, M.5    Hayes, P.6
  • 21
    • 61449261788 scopus 로고    scopus 로고
    • Association mapping of plant height, yield, and yield stability in recombinant chromosome substitution lines (RCSLs) using Hordeum vulgare subsp. spontaneum as a source of donor alleles in a Hordeum vulgare subsp. vulgare background
    • Inostroza L, del Pozo A, Matus I, Castillo D, Hayes P, Machado S, Corey A (2009) Association mapping of plant height, yield, and yield stability in recombinant chromosome substitution lines (RCSLs) using Hordeum vulgare subsp. spontaneum as a source of donor alleles in a Hordeum vulgare subsp. vulgare background. Mol Breeding 23: 365-376.
    • (2009) Mol Breeding , vol.23 , pp. 365-376
    • Inostroza, L.1    del Pozo, A.2    Matus, I.3    Castillo, D.4    Hayes, P.5    Machado, S.6    Corey, A.7
  • 22
    • 0039589908 scopus 로고
    • Determination and properties of barley and malt polyphenoloxidase
    • Jerumanis J, van Huynh N, Devreux A (1976) Determination and properties of barley and malt polyphenoloxidase. J Am Soc Brew Chem 34: 38-43.
    • (1976) J Am Soc Brew Chem , vol.34 , pp. 38-43
    • Jerumanis, J.1    van Huynh, N.2    Devreux, A.3
  • 23
    • 84989036300 scopus 로고
    • Multigene family of powdery mildew resistance genes in locus Mla on barley chromosome 5H
    • Jorgensen J (1992) Multigene family of powdery mildew resistance genes in locus Mla on barley chromosome 5H. Plant Breed 108: 53-59.
    • (1992) Plant Breed , vol.108 , pp. 53-59
    • Jorgensen, J.1
  • 24
    • 0028079119 scopus 로고
    • Genetics of powdery mildew resistance in barley
    • Jorgensen J (1994) Genetics of powdery mildew resistance in barley. Crit Rev Plant Sci 37: 97-119.
    • (1994) Crit Rev Plant Sci , vol.37 , pp. 97-119
    • Jorgensen, J.1
  • 25
    • 84989031271 scopus 로고
    • Powdery mildew resistance genes Mla29 and Mla32 in H. spontaneum derived winter-barley lines
    • Kintzios S, Jahoor A, Fischbeck G (1995) Powdery mildew resistance genes Mla29 and Mla32 in H. spontaneum derived winter-barley lines. Plant Breed 114: 265-266.
    • (1995) Plant Breed , vol.114 , pp. 265-266
    • Kintzios, S.1    Jahoor, A.2    Fischbeck, G.3
  • 27
    • 5144221069 scopus 로고    scopus 로고
    • Linkage disequilibrium mapping of yield and yield stability in modern spring barley cultivars
    • Kraakman A, Niks R, Petra M, van den Berg M, Stam P, van Eeuwijk F (2004) Linkage disequilibrium mapping of yield and yield stability in modern spring barley cultivars. Genetics 168: 435-446.
    • (2004) Genetics , vol.168 , pp. 435-446
    • Kraakman, A.1    Niks, R.2    Petra, M.3    van den Berg, M.4    Stam, P.5    van Eeuwijk, F.6
  • 29
    • 78649581906 scopus 로고    scopus 로고
    • Performance of single nucleotide polymorphisms versus haplotypes for genome-wide association analysis in barley
    • doi:10.1371/journal.pone.0014079
    • Lorenz A, Hamblin M, Jannink J-L (2010) Performance of single nucleotide polymorphisms versus haplotypes for genome-wide association analysis in barley. PLoS ONE 5(11): e14079. doi: 10. 1371/journal. pone. 0014079.
    • (2010) PLoS ONE , vol.5 , Issue.11
    • Lorenz, A.1    Hamblin, M.2    Jannink, J.-L.3
  • 31
  • 32
    • 34748832357 scopus 로고    scopus 로고
    • Validating molecular markers for barley leaf rust resistance genes Rph5 and Rph7
    • Mammadov J, Brooks W, Griffey C, Maroof S (2007) Validating molecular markers for barley leaf rust resistance genes Rph5 and Rph7. Plant Breed 126: 458-463.
    • (2007) Plant Breed , vol.126 , pp. 458-463
    • Mammadov, J.1    Brooks, W.2    Griffey, C.3    Maroof, S.4
  • 35
    • 0001830924 scopus 로고
    • Resistance of Triticum dicoccoides to infection with Erysiphe graminis tritici
    • Moseman J, Nevo E, El Morshidy M, Zohary D (1984) Resistance of Triticum dicoccoides to infection with Erysiphe graminis tritici. Euphytica 33: 41-47.
    • (1984) Euphytica , vol.33 , pp. 41-47
    • Moseman, J.1    Nevo, E.2    El Morshidy, M.3    Zohary, D.4
  • 37
    • 71849096141 scopus 로고    scopus 로고
    • How does multiple testing correction work?
    • Noble W (2009) How does multiple testing correction work? Nat Biotechnol 27(12): 1135-1137.
    • (2009) Nat Biotechnol , vol.27 , Issue.12 , pp. 1135-1137
    • Noble, W.1
  • 40
    • 0000354759 scopus 로고
    • The genetics of seedling resistance to leaf rust, Puccinia hordei Otth, in some spring barley cultivars
    • Parlevliet J (1976) The genetics of seedling resistance to leaf rust, Puccinia hordei Otth, in some spring barley cultivars. Euphytica 25: 249-254.
    • (1976) Euphytica , vol.25 , pp. 249-254
    • Parlevliet, J.1
  • 41
    • 79955565301 scopus 로고    scopus 로고
    • Genome-wide nested association mapping of quantitative resistance to northern leaf blight in maize
    • Poland J, Bradbury P, Buckler E, Nelson R (2011) Genome-wide nested association mapping of quantitative resistance to northern leaf blight in maize. PNAS 108: 6893-6898.
    • (2011) Pnas , vol.108 , pp. 6893-6898
    • Poland, J.1    Bradbury, P.2    Buckler, E.3    Nelson, R.4
  • 42
    • 33746512512 scopus 로고    scopus 로고
    • Principal component analysis corrects for stratification in genome-wide association studies
    • Price A, Patterson N, Plenge R, Weinblatt M, Shadick N, Reich D (2006) Principal component analysis corrects for stratification in genome-wide association studies. Nature Genet 38(8): 904-909.
    • (2006) Nature Genet , vol.38 , Issue.8 , pp. 904-909
    • Price, A.1    Patterson, N.2    Plenge, R.3    Weinblatt, M.4    Shadick, N.5    Reich, D.6
  • 43
    • 0001047970 scopus 로고    scopus 로고
    • Comparison and integration of four barley genetic maps
    • Qi X, Stam P, Lindhout P (1996) Comparison and integration of four barley genetic maps. Genome 39: 379-394.
    • (1996) Genome , vol.39 , pp. 379-394
    • Qi, X.1    Stam, P.2    Lindhout, P.3
  • 44
    • 9744245925 scopus 로고    scopus 로고
    • Genotypic variation in color and discoloration potential of barley based food products
    • Quinde Z, Ullrich S, Baik B-K (2004) Genotypic variation in color and discoloration potential of barley based food products. Cereal Chem 81: 752-758.
    • (2004) Cereal Chem , vol.81 , pp. 752-758
    • Quinde, Z.1    Ullrich, S.2    Baik, B.-K.3
  • 45
    • 27744464939 scopus 로고    scopus 로고
    • Genotypic and environmental effects on colour and discoloration potential of barley in food products
    • Quinde-Axtell Z, Ullrich S, Baik B-K (2005) Genotypic and environmental effects on colour and discoloration potential of barley in food products. Cereal Chem 82: 711-716.
    • (2005) Cereal Chem , vol.82 , pp. 711-716
    • Quinde-Axtell, Z.1    Ullrich, S.2    Baik, B.-K.3
  • 46
    • 33746477511 scopus 로고    scopus 로고
    • Retardation of discoloration in barley flour gel and dough
    • Quinde-Axtell Z, Power J, Baik B-K (2006) Retardation of discoloration in barley flour gel and dough. Cereal Chem 83(4): 385-390.
    • (2006) Cereal Chem , vol.83 , Issue.4 , pp. 385-390
    • Quinde-Axtell, Z.1    Power, J.2    Baik, B.-K.3
  • 48
    • 0002392443 scopus 로고
    • Inheritance of reaction to Puccinia hordei in barley II. Gene symbols for loci in differential cultivars
    • Roane C, Starling T (1967) Inheritance of reaction to Puccinia hordei in barley II. Gene symbols for loci in differential cultivars. Phytopathology 57: 66-68.
    • (1967) Phytopathology , vol.57 , pp. 66-68
    • Roane, C.1    Starling, T.2
  • 51
    • 8744231457 scopus 로고    scopus 로고
    • Version 9. 2. SAS Institute, Cary SAS Institute
    • SAS Institute (2008) SAS/STAT guide for personal computer. Version 9. 2. SAS Institute, Cary.
    • (2008) SAS/STAT guide for personal computer
  • 52
    • 0036242779 scopus 로고    scopus 로고
    • Mapping genes controlling variation in barley grain protein concentration
    • See D, Kanazin V, Kephart K, Blake T (2002) Mapping genes controlling variation in barley grain protein concentration. Crop Sci 42: 680-685.
    • (2002) Crop Sci , vol.42 , pp. 680-685
    • See, D.1    Kanazin, V.2    Kephart, K.3    Blake, T.4
  • 53
    • 0030477416 scopus 로고    scopus 로고
    • Genetics of seedling and adult plant resistance to net blotch (Pyrenophora teres f. teres) and spot blotch (Cochliobolus sativus) in barley
    • Steffenson B, Hayes P, Kleinhofs A (1996) Genetics of seedling and adult plant resistance to net blotch (Pyrenophora teres f. teres) and spot blotch (Cochliobolus sativus) in barley. Theor Appl Genet 92: 552-558.
    • (1996) Theor Appl Genet , vol.92 , pp. 552-558
    • Steffenson, B.1    Hayes, P.2    Kleinhofs, A.3
  • 54
    • 34347325206 scopus 로고    scopus 로고
    • A walk on the wild side: mining wild wheat and barley collections for rust resistance genes
    • Steffenson B, Olivera P, Roy J, Jin Y, Smith K, Muehlbauer G (2007) A walk on the wild side: mining wild wheat and barley collections for rust resistance genes. Australian J Agri Res 58: 532-544.
    • (2007) Australian J Agri Res , vol.58 , pp. 532-544
    • Steffenson, B.1    Olivera, P.2    Roy, J.3    Jin, Y.4    Smith, K.5    Muehlbauer, G.6
  • 57
    • 77956609674 scopus 로고    scopus 로고
    • Duplicate polyphenol oxidase genes on barley chromosome 2H and their functional differentiation in the phenol reaction of spikes and grains
    • Taketa S, Matsuki K, Amano S, Saisho D, Himi E, Shitsukawa N, You T, Noda K, Takeda K (2010) Duplicate polyphenol oxidase genes on barley chromosome 2H and their functional differentiation in the phenol reaction of spikes and grains. J Expt Bot 61(14): 3983-3993.
    • (2010) J Expt Bot , vol.61 , Issue.14 , pp. 3983-3993
    • Taketa, S.1    Matsuki, K.2    Amano, S.3    Saisho, D.4    Himi, E.5    Shitsukawa, N.6    You, T.7    Noda, K.8    Takeda, K.9
  • 61
    • 84856030953 scopus 로고    scopus 로고
    • Effect of population size and unbalanced data sets on QTL detection using genome-wide association mapping in barley breeding germplasm
    • Wang H, Smith K, Combs E, Blake T, Horsley R, Muehlbauer G (2012) Effect of population size and unbalanced data sets on QTL detection using genome-wide association mapping in barley breeding germplasm. Theor Appl Genet 124: 111-124.
    • (2012) Theor Appl Genet , vol.124 , pp. 111-124
    • Wang, H.1    Smith, K.2    Combs, E.3    Blake, T.4    Horsley, R.5    Muehlbauer, G.6
  • 63
    • 1542288779 scopus 로고    scopus 로고
    • Conversion of an amplified fragment length polymorphism marker into a co-dominant marker in the mapping of Rph15 gene conferring resistance to barley leaf rust, Puccinia hordei Otth
    • Weerasena J, Steffenson B, Falk A (2004) Conversion of an amplified fragment length polymorphism marker into a co-dominant marker in the mapping of Rph15 gene conferring resistance to barley leaf rust, Puccinia hordei Otth. Theor Appl Genet 108: 712-719.
    • (2004) Theor Appl Genet , vol.108 , pp. 712-719
    • Weerasena, J.1    Steffenson, B.2    Falk, A.3
  • 64
    • 0032754045 scopus 로고    scopus 로고
    • The Mla (Powdery Mildew) resistance cluster is associated with three NBS-LRR gene families and suppressed recombination within a 240-kb DNA interval on chromosome 5S (1HS) of barley
    • Wei F, Gobelman-Werner K, Morroll S, Kurth J, Mao L, Wing R, Leister D, Schulze-Lefert P, Wise R (1999) The Mla (Powdery Mildew) resistance cluster is associated with three NBS-LRR gene families and suppressed recombination within a 240-kb DNA interval on chromosome 5S (1HS) of barley. Genetics 153: 1929-1948.
    • (1999) Genetics , vol.153 , pp. 1929-1948
    • Wei, F.1    Gobelman-Werner, K.2    Morroll, S.3    Kurth, J.4    Mao, L.5    Wing, R.6    Leister, D.7    Schulze-Lefert, P.8    Wise, R.9
  • 65
    • 70349990690 scopus 로고    scopus 로고
    • Association mapping of agronomic traits on chromosome 2A of wheat
    • Yao J, Wang L, Liu L, Zao C, Zheng Y (2009) Association mapping of agronomic traits on chromosome 2A of wheat. Genetica 137: 67-75.
    • (2009) Genetica , vol.137 , pp. 67-75
    • Yao, J.1    Wang, L.2    Liu, L.3    Zao, C.4    Zheng, Y.5


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