Auxin signal transcription factor regulates expression of the brassinosteroid receptor gene in rice

Plant Journal

Volumn 73, Issue 4, 2013, Pages 676-688

  Sakamoto, Tomoaki ^a   Morinaka, Yoichi ^b   Inukai, Yoshiaki ^b   Kitano, Hidemi ^b   Fujioka, Shozo ^c  

^a ISHIKAWA PREFECTURAL UNIVERSITY   (Japan)

^b NAGOYA UNIVERSITY   (Japan)

^c RIKEN   (Japan)

Author keywords

auxin; auxin response element; auxin response factor; brassinosteroid; rice; transcriptional regulation

Indexed keywords

AUXIN; AUXIN-RESPONSE ELEMENT; AUXIN-RESPONSE FACTOR; BRASSINOSTEROIDS; RICE; TRANSCRIPTIONAL REGULATION;

ACETIC ACID; BIOASSAY; GENES; PH; TRANSCRIPTION FACTORS;

STEROID HORMONES;

BRASSINOSTEROID; BRI1 PROTEIN, ORYZA SATIVA; INDOLEACETIC ACID; INDOLEACETIC ACID DERIVATIVE; MESSENGER RNA; PHYTOHORMONE; PROTEIN SERINE THREONINE KINASE; REPRESSOR PROTEIN; TRANSCRIPTION FACTOR; VEGETABLE PROTEIN;

ARTICLE; BIOSYNTHESIS; DRUG EFFECT; GENE EXPRESSION REGULATION; GENETIC TRANSCRIPTION; GENETICS; GROWTH, DEVELOPMENT AND AGING; METABOLISM; PLANT GENE; PLANT LEAF; PROMOTER REGION; PROTEIN BINDING; RICE; TRANSGENIC PLANT;

BRASSINOSTEROIDS; GENE EXPRESSION REGULATION, PLANT; GENES, PLANT; INDOLEACETIC ACIDS; ORYZA SATIVA; PLANT GROWTH REGULATORS; PLANT LEAVES; PLANT PROTEINS; PLANTS, GENETICALLY MODIFIED; PROMOTER REGIONS, GENETIC; PROTEIN BINDING; PROTEIN-SERINE-THREONINE KINASES; REPRESSOR PROTEINS; RNA, MESSENGER; TRANSCRIPTION FACTORS; TRANSCRIPTION, GENETIC;

ORYZA SATIVA;

EID: 84874275450     PISSN: 09607412     EISSN: 1365313X     Source Type: Journal    
DOI: 10.1111/tpj.12071     Document Type: Article

References (64)

1. Abel, S., Oeller, P.W., and, Theologis, A., (1994) Early auxin-induced genes encode short-lived nuclear proteins. Proc. Natl Acad. Sci. USA, 91, 326-330.
2. Bao, F., Shen, J., Brady, S.R., Muday, G.K., Asami, T., and, Yang, Z., (2004) Brassinosteroids interact with auxin to promote lateral root development in Arabidopsis. Plant Physiol. 134, 1624-1631.
3. Chung, Y., Maharjan, P.M., Lee, O., et al. (2011) Auxin stimulates DWARF4 expression and brassinosteroid biosynthesis in Arabidopsis. Plant J. 66, 564-578.
4. Clouse, S.D., and, Sasse, J.M., (1998) BRASSINOSTEROIDS: essential regulators of plant growth and development. Annu. Rev. Plant Physiol. Plant Mol. Biol. 49, 427-451.
5. Depuydt, S., and, Hardtke, C.S., (2011) Hormone signalling crosstalk in plant growth regulation. Curr. Biol. 21, R365-R373.
6. Fujino, K., Matsuda, Y., Ozawa, K., Nishimura, T., Koshiba, T., Fraaije, M.W., and, Sekiguchi, H., (2008) NARROW LEAF 7 controls leaf shape mediated by auxin in rice. Mol. Genet. Genomics 279, 499-507.
7. Fujioka, S., Noguchi, T., Takatsuto, S., and, Yoshida, S., (1998) Activity of brassinosteroids in the dwarf rice lamina inclination bioassay. Phytochemistry, 49, 1841-1848.
8. Gendron, J.M., and, Wang, Z.Y., (2007) Multiple mechanisms modulate brassinosteroid signaling. Curr. Opin. Plant Biol. 10, 436-441.
9. Gil, P., Liu, Y., Orbovic̈, V., Verkamp, E., Poff, K.L., and, Green, P.J., (1994) Characterization of the auxin-inducible SAUR-AC1 gene for use as a molecular genetic tool in Arabidopsis. Plant Physiol. 104, 777-784.
10. Goda, H., Shimada, Y., Asami, T., Fujioka, S., and, Yoshida, S., (2002) Microarray analysis of brassinosteroid-regulated genes in Arabidopsis. Plant Physiol. 130, 1319-1334.
11. Goda, H., Sawa, S., Asami, T., Fujioka, S., Shimada, Y., and, Yoshida, S., (2004) Comprehensive comparison of auxin-regulated and brassinosteroid- regulated genes in Arabidopsis. Plant Physiol. 134, 1555-1573.
12. TIR1-dependent degradation of AUX/IAA proteins. Nature 414, 271-276.
13. Guilfoyle, T.J., and, Hagen, G., (2007) Auxin response factors. Curr. Opin. Plant Biol. 10, 453-460.
14. Hagen, G., and, Guilfoyle, T., (2002) Auxin-responsive gene expression: genes, promoters and regulatory factors. Plant Mol. Biol. 49, 373-385.
15. Halliday, K.J., (2004) Plant hormones: the interplay of brassinosteroids and auxin. Curr. Biol. 14, R1008-R1010.
16. Hardtke, C.S., (2007) Transcriptional auxin-brassinosteroid crosstalk: who's talking? BioEssays 29, 1115-1123.
17. Hardtke, C.S., Dorcey, E., Osmont, K.S., and, Sibout, R., (2007) Phytohormone collaboration: zooming in on auxin-brassinosteroid interactions. Trends Cell Biol. 17, 485-492.
18. He, J.X., Gendron, J.M., Yang, Y., Li, J., and, Wang, Z.Y., (2002) The GSK3-like kinase BIN2 phosphorylates and destabilizes BZR1, a positive regulator of the brassinosteroid signaling pathway in Arabidopsis. Proc. Natl Acad. Sci. USA 99, 10185-10190.
19. Hiei, Y., Ohta, S., Komari, T., and, Kumashiro, T., (1994) Efficient transformation of rice (Oryza sativa L.) mediated by Agrobacterium and sequence analysis of boundaries of the T-DNA. Plant J. 6, 271-282.
20. Hong, Z., Ueguchi-Tanaka, M., Shimizu-Sato, S., et al. (2002) Loss-of-function of a rice brassinosteroid biosynthetic enzyme, C-6 oxidase, prevents the organized arrangement and polar elongation of cells in the leaves and stem. Plant J. 32, 495-508.
21. Inukai, Y., Sakamoto, T., Ueguchi-Tanaka, M., Shibata, Y., Gomi, K., Umemura, I., Hasegawa, Y., Ashikari, M., Kitano, H., and, Matsuoka, M., (2005) Crown rootless1, which is essential for crown root formation in rice, is a target of an AUXIN RESPONSE FACTOR in auxin signaling. Plant Cell 17, 1387-1396.
22. Jain, M., Tyagi, A.K., and, Khurana, J.P., (2006) Molecular characterization and differential expression of cytokinin-responsive type-A response regulators in rice (Oryza sativa). BMC Plant Biol. 6, 1.
23. Jung, K.H., Seo, Y.S., Walia, H., Cao, P., Fukao, T., Canlas, P.E., Amonpant, F., Bailey-Serres, J., and, Ronald, P.C., (2010) The submergence tolerance regulator Sub1A mediates stress-responsive expression of AP2/ERF transcription factors. Plant Physiol. 152, 1674-1692.
24. 3 in the elongation of cucumber hypocotyl sections. Plant Cell Physiol. 26, 615-625.
25. Kim, T.W., and, Wang, Z.Y., (2010) Brassinosteroid signal transduction from receptor kinases to transcription factors. Annu. Rev. Plant Biol. 61, 681-704.
26. Kim, S.-K., Abe, H., Little, C.H.A., and, Pharis, R.P., (1990) Identification of two brassinosteroids from the cambial region of Scots pine (Pinus sylvestris) by gas chromatography-mass spectrometry, after detection using a dwarf rice lamina inclination bioassay. Plant Physiol. 94, 1709-1713.
27. Li, J., and, Jin, H., (2007) Regulation of brassinosteroid signaling. Trends Plant Sci. 12, 37-41.
28. Lorenzo, O., Chico, J.M., Sánchez-Serrano, J.J., and, Solano, R., (2004) JASMONATE-INSENSITIVE1 encodes a MYC transcription factor essential to discriminate between different jasmonate-regulated defense responses in Arabidopsis. Plant Cell 16, 1938-1950.
29. Maeda, E., (1965) Rate of lamina inclination in excised rice leaves. Physiol. Plant. 18, 813-827.
30. Mockaitis, K., and, Estelle, M., (2004) Integrating transcriptional controls for plant cell expansion. Genome Biol. 5, 245.
31. Mori, M., Nomura, T., Ooka, H., et al. (2002) Isolation and characterization of a rice dwarf mutant with a defect in brassinosteroid biosynthesis. Plant Physiol. 130, 1152-1161.
32. Müssig, C., Fischer, S., and, Altmann, T., (2002) Brassinosteroid-regulated gene expression. Plant Physiol. 129, 1241-1251.
33. Nakagawa, H., Ohmiya, K., and, Hattori, T., (1996) A rice bZIP protein, designated OSBZ8, is rapidly induced by abscisic acid. Plant J. 9, 217-227.
34. Nakamura, A., Fujioka, S., Sunohara, H., et al. (2006) The role of OsBRI1 and its homologous genes, OsBRL1 and OsBRL3, in rice. Plant Physiol. 140, 580-590.
35. Nemhauser, J.L., Mockler, T.C., and, Chory, J., (2004) Interdependency of brassinosteroid and auxin signaling in Arabidopsis. PLoS Biol. 2, e258.
36. Nemhauser, J.L., Hong, F., and, Chory, J., (2006) Different plant hormones regulate similar processes through largely nonoverlapping transcriptional responses. Cell 126, 467-475.
37. Qi, J., Qian, Q., Bu, Q., et al. (2008) Mutation of the rice Narrow leaf1 gene, which encodes a novel protein, affects vein patterning and polar auxin transport. Plant Physiol. 147, 1947-1959.
38. Qi, W., Sun, F., Wang, Q., Chen, M., Huang, Y., Feng, Y.Q., Luo, X., and, Yang, J., (2011) Rice ethylene-response AP2/ERF factor OsEATB restricts internode elongation by down-regulating a gibberellin biosynthetic gene. Plant Physiol. 157, 216-228.
39. Sakai, M., Sakamoto, T., Saito, T., Matsuoka, M., Tanaka, H., and, Kobayashi, M., (2003) Expression of novel rice gibberellin 2-oxidase gene is under homeostatic regulation by biologically active gibberellins. J. Plant. Res. 116, 161-164.
40. Sakamoto, T., and, Matsuoka, M., (2006) Characterization of CONSTITUTIVE PHOTOMORPHOGENESIS AND DWARFISM homologs in rice (Oryza sativa L.). J. Plant Growth Regul. 25, 245-251.
41. Sakamoto, T., Morinaka, Y., Ohnishi, T., et al. (2006a) Erect leaves caused by brassinosteroid deficiency increase biomass production and grain yield in rice. Nat. Biotechnol. 24, 105-109.
42. Sakamoto, T., Sakakibara, H., Kojima, M., Yamamoto, Y., Nagasaki, H., Inukai, Y., Sato, Y., and, Matsuoka, M., (2006b) Ectopic expression of KNOX homeodomain protein induces expression of cytokinin biosynthesis gene in rice. Plant Physiol. 142, 54-62.
43. Sakamoto, T., Kawabe, A., Tokida-Segawa, A., Shimizu, B., Takatsuto, S., Shimada, Y., Fujioka, S., and, Mizutani, M., (2011) Rice CYP734As function as multisubstrate and multifunctional enzymes in brassinosteroid catabolism. Plant J. 67, 1-12.
44. Sakamoto, T., Ohnishi, T., Fujioka, S., Watanabe, B., and, Mizutani, M., (2012) Rice CYP90D2 and CYP90D3 catalyze C-23 hydroxylation of brassinosteroids in vitro. Plant Physiol. Biochem. 58, 220-226.
45. Savaldi-Goldstein, S., Peto, C., and, Chory, J., (2007) The epidermis both drives and restricts plant shoot growth. Nature 446, 199-202.
46. Seo, J.S., Joo, J., Kim, M.J., Kim, Y.K., Nahm, B.H., Song, S.I., Cheong, J.J., Lee, J.S., Kim, J.K., and, Choi, Y.D., (2011) OsbHLH148, a basic helix-loop-helix protein, interacts with OsJAZ proteins in a jasmonate signaling pathway leading to drought tolerance in rice. Plant J. 65, 907-921.
47. Shen, C., Wang, S., Bai, Y., Wu, Y., Zhang, S., Chen, M., Guilfoyle, T.J., Wu, P., and, Qi, Y., (2010) Functional analysis of the structural domain of ARF proteins in rice (Oryza sativa L.). J. Exp. Bot. 61, 3971-3981.
48. Symons, G.M., and, Reid, J.B., (2004) Brassinosteroids do not undergo long-distance transport in pea. Implications for the regulation of endogenous brassinosteroid levels. Plant Physiol. 135, 2196-2206.
49. Symons, G.M., Ross, J.J., Jager, C.E., and, Reid, J.B., (2008) Brassinosteroid transport. J. Exp. Bot. 59, 17-24.
50. Takeno, K., and, Pharis, R.P., (1982) Brassinosteroid-induced bending of the leaf lamina of dwarf rice seedlings: an auxin-mediated phenomenon. Plant Cell Physiol. 23, 1275-1281.
51. Tanaka, A., Nakagawa, H., Tomita, C., et al. (2009) BRASSINOSTEROID UPREGULATED1, encoding a helix-loop-helix protein, is a novel gene involved in brassinosteroid signaling and controls bending of the lamina joint in rice. Plant Physiol. 151, 669-680.
52. Thakur, J.K, Tyagi, A.K., and, Khurana, J.P., (2001) OsIAA1, an Aux/IAA cDNA from rice, and changes in its expression as influenced by auxin and light. DNA Res. 8, 193-203.
53. Ulmasov, T., Liu, Z.-B., Hagen, G., and, Guilfoyle, T.J., (1995) Composite structure of auxin response elements. Plant Cell 7, 1611-1623.
54. Wada, K., Marumo, S., Ikekawa, N., Morisaki, M., and, Mori, K., (1981) Brassinolide and homobrassinolide promotion of lamina inclination of rice seedlings. Plant Cell Physiol. 22, 323-325.
55. Wang, S., Tiwari, S.B., Hagen, G., and, Guilfoyle, T.J., (2005) AUXIN RESPONSE FACTOR7 restores the expression of auxin-responsive genes in mutant Arabidopsis leaf mesophyll protoplasts. Plant Cell 17, 1979-1993.
56. Wang, D., Pei, K., Fu, Y., Sun, Z., Li, S., Liu, H., Tang, K., Han, B., and, Tao, Y., (2007) Genome-wide analysis of the auxin response factors (ARF) gene family in rice (Oryza sativa). Gene 394, 13-24.
57. Woodward, A.W., and, Bartel, B., (2005) Auxin: regulation, action, and interaction. Ann. Bot. 95, 707-735.
58. Yamamuro, C., Ihara, Y., Wu, X., Noguchi, T., Fujioka, S., Takatsuto, S., Ashikari, M., Kitano, H., and, Matsuoka, M., (2000) Loss of function of a rice brassinosteroid insensitive1 homolog prevents internode elongation and bending of the lamina joint. Plant Cell 12, 1591-1606.
59. Yin, Y., Wang, Z.Y., Mora-Garcia, S., Li, J., Yoshida, S., Asami, T., and, Chory, J., (2002) BES1 accumulates in the nucleus in response to brassinosteroids to regulate gene expression and promote stem elongation. Cell 109, 181-191.
60. Yin, Y., Vafeados, D., Tao, Y., Yoshida, S., Asami, T., and, Chory, J., (2005) A new class of transcription factors mediates brassinosteroid-regulated gene expression in Arabidopsis. Cell 120, 249-259.
61. Yokota, T., and, Mori, K,. (1992) Molecular structure and biological activity of brassinolide and related brassinosteroids. In Molecular Structure and Biological Activity of Steroids (Bohl, M. and Duax, W.L., eds). Boca Raton, FL: CRC Press, pp. 317-340.
62. Yokota, T., Higuchi, K., Kosaka, Y., and, Takahashi, N,. (1992) Transport and metabolism of brassinosteroids in rice. In Progress in Plant Growth Regulation (Karssen, C.M., van Loon, L.C. and Vreugdenhil, D., eds). Dordrecht, The Netherlands: Kluwer, pp. 298-305.
63. Yopp, J.H., Mandava, N.B., and, Sasse, J.M., (1981) Brassinolide, a growth-promoting steroidal lactone. I. Activity in selected auxin bioassays. Physiol. Plant. 53, 445-452.
64. Zenser, N., Ellsmore, A., Leasure, C., and, Callis, J., (2001) Auxin modulates the degradation rate of Aux/IAA proteins. Proc. Natl Acad. Sci. USA, 98, 11795-11800.