-
1
-
-
0030888660
-
Threedistinctive steps in Peyer's patch formation of murine embryo
-
Adachi, S., Yoshida, H., Kataoka, H.,and Nishikawa, S.I. (1997). Threedistinctive steps in Peyer's patch formation of murine embryo. Int. Immunol. 9, 507-514.
-
(1997)
Int. Immunol.
, vol.9
, pp. 507-514
-
-
Adachi, S.1
Yoshida, H.2
Kataoka, H.3
Nishikawa, S.I.4
-
2
-
-
70449804139
-
Simulating biology: towards understanding what the simulation shows
-
eds S. Stepney, F.Polack, and P Welch (UK: Luniver Press)
-
Andrews, P. S., Polack, F., Sampson, A. T., Timmis, J., Scott, L.,andColes, M. (2008)."Simulating biology: towards understanding what the simulation shows," in Proceedings of the 2008 Workshop on Complex Systems Modelling and Simulation, eds S. Stepney, F. Polack, and P. Welch (UK: Luniver Press),93-123.
-
(2008)
Proceedings of the 2008 Workshop on Complex Systems Modelling and Simulation
, pp. 93-123
-
-
Andrews, P.S.1
Polack, F.2
Sampson, A.T.3
Timmis, J.4
Scott, L.5
Coles, M.6
-
3
-
-
79960362852
-
The CoSMoS process, Version 0.1: a process for the modelling and simulation of complex systems
-
Department of Computer Science, University of York
-
Andrews, P. S., Polack, F. A. C., Samp- son, A. T., Stepney, S., and Timmis, J. (2010). The CoSMoS process, Version 0.1: a process for the modelling and simulation of complex systems. Technical Report, YCS-2010-453, Department of Computer Science, University of York, 1-40.
-
(2010)
Technical Report, YCS-2010-453
, pp. 1-40
-
-
Andrews, P.S.1
Polack, F.A.C.2
Samp Son, A.T.3
Stepney, S.4
Timmis, J.5
-
4
-
-
84867930594
-
CoSMoS process, models, and metamodels
-
eds S. Stepney, P. H. Welch, P. S. Andrews, andC G. Ritson(UK:LuniverPress)
-
Andrews, P. S., Stepney, S., Hoverd, T., Polack, F. A. C., Sampson, A. T., and Timmis, J. (2011). "CoSMoS process, models, and metamodels," in CoSMoS 2011: Proceedings of the 2011 Workshop on Complex Systems Modelling and Simulation, eds S. Stepney, P. H. Welch, P. S. Andrews, andC.G.Ritson(UK:LuniverPress), 1-14.
-
(2011)
CoSMoS 2011: Proceedings of the 2011 Workshop on Complex Systems Modelling and Simulation
, pp. 1-14
-
-
Andrews, P.S.1
Stepney, S.2
Hoverd, T.3
Polack, F.A.C.4
Sampson, A.T.5
Timmis, J.6
-
5
-
-
33751020258
-
Immune system modeling: The OO Way in ICARIS 2006
-
eds H. Bersini and J. Carneiro (Heidelberg: Springer)
-
Bersini, H., and Carneiro, J. (2006). "Immune system modeling: The OO Way," in ICARIS 2006, Lecture Notes Computer Science, 4163, eds H. Bersini and J. Carneiro (Heidelberg: Springer), 150-163.
-
(2006)
Lecture Notes Computer Science
, vol.4163
, pp. 150-163
-
-
Bersini, H.1
Carneiro, J.2
-
6
-
-
72949108077
-
Pairing computation with experimentation: a powerful coupling for understanding T cell signalling
-
Chakraborty, A. K., and Das, J. (2010). Pairing computation with experimentation: a powerful coupling for understanding T cell signalling. Nat. Rev. Immunol. 10,59-71.
-
(2010)
Nat. Rev. Immunol.
, vol.10
, pp. 59-71
-
-
Chakraborty, A.K.1
Das, J.2
-
7
-
-
0000980950
-
Number, size, and distribution of Peyer's patches in the human small intestine: Part I The development of Peyer's patches
-
Cornes, J. S. (1965). Number, size, and distribution of Peyer's patches in the human small intestine: Part I The development of Peyer's patches. Gut 6, 225-229.
-
(1965)
Gut
, vol.6
, pp. 225-229
-
-
Cornes, J.S.1
-
8
-
-
0346496018
-
An essential function for the nuclear receptor ROR gamma in the generation of fetal lymphoid tissue inducer cells
-
Eberl, G., Marmon, S., Sunshine, M.-J., Rennert, P. D., Choi, Y., and Littman, D. R. (2004). An essential function for the nuclear receptor ROR gamma in the generation of fetal lymphoid tissue inducer cells. Nat. Immun. 5, 64-73.
-
(2004)
Nat. Immun.
, vol.5
, pp. 64-73
-
-
Eberl, G.1
Marmon, S.2
Sunshine, M.J.3
Rennert, P.D.4
Choi, Y.5
Littman, D.R.6
-
9
-
-
59649126471
-
Deriving a germinal center lymphocyte migration model from two-photon data
-
Figge, M. T., Garin, A., Gunzer, M., Kosco-Vilbois, M., Toellner, K.-M., and Meyer-Hermann, M. (2008). Deriving a germinal center lymphocyte migration model from two-photon data. J. Exper. Med. 205, 3019-3029.
-
(2008)
J. Exper. Med.
, vol.205
, pp. 3019-3029
-
-
Figge, M.T.1
Garin, A.2
Gunzer, M.3
Kosco Vilbois, M.4
Toellner, K.M.5
Meyer Hermann, M.6
-
11
-
-
34247111395
-
Neuroregulator RET initiates Peyer's Patch tissue genesis
-
Fukuyama, S., and Kiyono, H. (2007). Neuroregulator RET initiates Peyer's Patch tissue genesis. Immunity 26, 393-395.
-
(2007)
Immunity
, vol.26
, pp. 393-395
-
-
Fukuyama, S.1
Kiyono, H.2
-
12
-
-
79953050420
-
Systemsbiologyinimmunology: a computational modeling perspective
-
Germain, R. N., Meier-schellersheim, M., Nitalazar, A., and Fraser, I. D. C. (2011). Systemsbiologyinimmunology: a computational modeling perspective. Annu. Rev. Immunol. 29, 527-585.
-
(2011)
Annu. Rev. Immunol.
, vol.29
, pp. 527-585
-
-
Germain, R.N.1
Meier Schellersheim, M.2
Nitalazar, A.3
Fraser, I.D.C.4
-
13
-
-
26944448882
-
A comparative study on modeling strategies for immune system dynamics under HIV-1 infection," in Artificial Immune Systems, 4th International Conference, ICARIS 2005, Albeta, Canada
-
(Heidelberg: Springer)
-
Guo, Z., and Tay, J. C. (2005). "A comparative study on modeling strategies for immune system dynamics under HIV-1 infection," in Artificial Immune Systems, 4th International Conference, ICARIS 2005, Albeta, Canada, Lecture Notes Computer Science 3627 (Heidelberg: Springer), 220-233.
-
(2005)
Lecture Notes Computer Science
, vol.3627
, pp. 220-233
-
-
Guo, Z.1
Tay, J.C.2
-
14
-
-
35048864427
-
Immunity through Swarms: agentbased simulations of the human immunesystem, "ArtificialImmune Systems, International Conference
-
eds G. Nicosia, V. Cutello, P. Bentley, and J Timmis (Heidelberg: Springer)
-
Jacob, C., Litorco, J., and Lee, L. (2004). "Immunity through Swarms: agentbased simulations of the human immunesystem,"inArtificialImmune Systems, International Conference, ICARIS 2004 Proceedings. Lecture Notes in Computer Science 3239,eds G. Nicosia, V. Cutello, P. Bentley, and J. Timmis (Heidelberg: Springer), 400-412.
-
(2004)
ICARIS 2004 Proceedings. Lecture Notes in Computer Science
, vol.3239
, pp. 400-412
-
-
Jacob, C.1
Litorco, J.2
Lee, L.3
-
15
-
-
79956063855
-
Peyer's patches: the immune sensors of the intestine
-
Jung, C., Hugot, J.-P., and Barreau, F. (2010). Peyer's patches: the immune sensors of the intestine. Int. J. Inflam. 823710.
-
(2010)
Int. J. Inflam.
, pp. 823710
-
-
Jung, C.1
Hugot, J.P.2
Barreau, F.3
-
16
-
-
0035155729
-
A dynamical model for the immune repertoire
-
Lagreca, M. C., de Almeida, R. M. C., and dos Santos, R. M. Z. (2001). A dynamical model for the immune repertoire. Physica A 289, 191-207.
-
(2001)
Physica A
, vol.289
, pp. 191-207
-
-
Lagreca, M.C.1
de Almeida, R.M.C.2
dos Santos, R.M.Z.3
-
17
-
-
26844529359
-
MASON: a multiagent simulation environment
-
Luke, S. (2005). MASON: a multiagent simulation environment. Simulation 81,517-527.
-
(2005)
Simulation
, vol.81
, pp. 517-527
-
-
Luke, S.1
-
18
-
-
0038558196
-
Overlapping roles of CXCL13, interleukin 7 receptor alpha, and CCR7 ligands in lymph node development
-
Luther, S. A., Ansel, K. M., and Cyster, J. G. (2003). Overlapping roles of CXCL13, interleukin 7 receptor alpha, and CCR7 ligands in lymph node development. J. Exp. Med. 197, 1191-1198.
-
(2003)
J. Exp. Med.
, vol.197
, pp. 1191-1198
-
-
Luther, S.A.1
Ansel, K.M.2
Cyster, J.G.3
-
19
-
-
45449094504
-
A methodology for performing global uncertaintyandsensitivityanalysisin systems biology
-
Marino, S., Hogue, I. B., Ray, C. J., and Kirschner, D. E. (2008). A methodology for performing global uncertaintyandsensitivityanalysisin systems biology. J. Theor. Biol. 254, 178-196.
-
(2008)
J. Theor. Biol.
, vol.254
, pp. 178-196
-
-
Marino, S.1
Hogue, I.B.2
Ray, C.J.3
Kirschner, D.E.4
-
20
-
-
34248573325
-
Ectopic lymphoidorgan development occurs through interleukin 7-mediated enhanced survival of lymphoid-tissue-inducer cells
-
Meier, D., Bornmann, C., Chappaz, S., Schmutz, S., Otten, L. A., Ceredig, R., Acha-Orbea, H., and Finke, D. (2007). Ectopic lymphoidorgan development occurs through interleukin 7-mediated enhanced survival of lymphoid-tissue-inducer cells. Immunity 26,643-654.
-
(2007)
Immunity
, vol.26
, pp. 643-654
-
-
Meier, D.1
Bornmann, C.2
Chappaz, S.3
Schmutz, S.4
Otten, L.A.5
Ceredig, R.6
Acha-Orbea, H.7
Finke, D.8
-
21
-
-
84921749027
-
Differential RET signaling responses orchestrate lymphoid and nervous enteric system development
-
(in press)
-
Patel, A., Harker, N., Moreira-Santos, L., Ferreira, M., Alden, K., Timmis, J., Foster, K., Garefalaki, A., Pachnis, P., Andrews, P. S., Enomoto, H., Milbrandt, J., Pachnis, V., Coles, M., Kioussis, D., and Veiga-Fernandes, H. (2012). Differential RET signaling responses orchestrate lymphoid and nervous enteric system development. Sci. Signal (in press).
-
(2012)
Sci. Signal.
-
-
Patel, A.1
Harker, N.2
Moreira Santos, L.3
Ferreira, M.4
Alden, K.5
Timmis, J.6
Foster, K.7
Garefalaki, A.8
Pach Nis, P.9
Andrews, P.S.10
Enomoto, H.11
Milbrandt, J.12
Pachnis, V.13
Coles, M.14
Kioussis, D.15
Veiga-Fernandes, H.16
-
22
-
-
77956175900
-
New insights into the development of lymphoid tissues
-
Van de Pavert, S. A., and Mebius, R. E. (2010). New insights into the development of lymphoid tissues. Nat. Rev. Immunol. 10,664-674.
-
(2010)
Nat. Rev. Immunol.
, vol.10
, pp. 664-674
-
-
Van de Pavert, S.A.1
Mebius, R.E.2
-
23
-
-
42649122256
-
Developmentof secondarylymphoid organs
-
Randall, T. D., Carragher, D. M., and Rangel-Moreno, J. (2008). Developmentof secondarylymphoid organs. Annu. Rev. Immunol 26, 627-650.
-
(2008)
Annu. Rev. Immunol
, vol.26
, pp. 627-650
-
-
Randall, T.D.1
Carragher, D.M.2
Rangel-Moreno, J.3
-
24
-
-
84857066283
-
Techniques for grounding agent-based simulations in the real domain: a case study in experimental autoimmune encephalomyelitis
-
Read, M., Andrews, P. S., Timmis, J., and Kumar, V. (2012). Techniques for grounding agent-based simulations in the real domain: a case study in experimental autoimmune encephalomyelitis. Math. Comput. Model. Dyn. Syst. 18, 67-86.
-
(2012)
Math. Comput. Model. Dyn. Syst.
, vol.18
, pp. 67-86
-
-
Read, M.1
Andrews, P.S.2
Timmis, J.3
Kumar, V.4
-
25
-
-
70350340101
-
Using UML to model EAE and its regulatory network
-
(Berlin: Springer-Verlag)
-
Read, M., Timmis, J., Andrews, P. S., and Kumar, V. (2009). "Using UML to model EAE and its regulatory network," in '09 Proceedings of the 8th International Conference on Artificial Immune Systems, LecturerNotesComputerScience 5666 (Berlin: Springer-Verlag) 4-6.
-
(2009)
09 Proceedings of the 8th International Conference on Artificial Immune Systems Lecturer Notes ComputerScience
, vol.5666
, pp. 4-6
-
-
Read, M.1
Timmis, J.2
Andrews, P.S.3
Kumar, V.4
-
26
-
-
0004237770
-
Sensitivity Analysis
-
Wiley. NY: John Wiley & Sons, Inc
-
Saltelli, A., Chan, K., and Scott, E. M. (2000). "Sensitivity Analysis," in Wiley Series in Probability and Statistics Wiley. NY: John Wiley & Sons, Inc.
-
(2000)
Wiley Series in Probability and Statistics
-
-
Saltelli, A.1
Chan, K.2
Scott, E.M.3
-
27
-
-
0001722102
-
Simulation of HIV infection in artificial immune systems
-
Sieburg, H. B., McCutchan, J. A., Clay, O. K., Cabalerro, L., and Ostlund, J. J. (1990). Simulation of HIV infection in artificial immune systems. Physica D 45, 208-227.
-
(1990)
Physica D
, vol.45
, pp. 208-227
-
-
Sieburg, H.B.1
McCutchan, J.A.2
Clay, O.K.3
Cabalerro, L.4
Ostlund, J.J.5
-
28
-
-
0034615789
-
Modeling plasma virus concentration during primary HIV infection
-
Stafford, M. A., Corey, L., Cao, Y., Daar, E. S., Ho, D. D., and Perelson, A. S. (2000). Modeling plasma virus concentration during primary HIV infection. J. Theor. Biol. 203, 285-301.
-
(2000)
J. Theor. Biol.
, vol.203
, pp. 285-301
-
-
Stafford, M.A.1
Corey, L.2
Cao, Y.3
Daar, E.S.4
Ho, D.D.5
Perel Son, A.S.6
-
29
-
-
0034411339
-
A critique and improvement of the CL commonlanguageeffectsizestatistics of McGrawandWong
-
Vargha, A.,and Delaney, H.D. (2000).A critique and improvement of the CL commonlanguageeffectsizestatistics of McGrawandWong.J.Educ.Behav. Stat. 25,101-132.
-
(2000)
J. Educ. Behav. Stat.
, vol.25
, pp. 101-132
-
-
Vargha, A.1
Delaney, H.D.2
-
30
-
-
34047158654
-
Tyrosine kinase receptor RET is a key regulator of Peyer's patch organogenesis
-
Veiga-Fernandes, H., Coles, M. C., Foster, K. E., Patel, A., Williams, A., Natarajan, D., Barlow, A., Pachnis, V., and Kioussis, D. (2007). Tyrosine kinase receptor RET is a key regulator of Peyer's patch organogenesis. Nature 446, 547-551.
-
(2007)
Nature
, vol.446
, pp. 547-551
-
-
Veiga-Fernandes, H.1
Coles, M.C.2
Foster, K.E.3
Patel, A.4
Williams, A.5
Natarajan, D.6
Barlow, A.7
Pachnis, V.8
Kioussis, D.9
|