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Volumn 6, Issue 2, 2013, Pages 290-302

Linkage disequilibrium and effective population size when generations overlap

Author keywords

Age structure; Computer simulations; Effective number of breeders; LDNe; Microsatellites; Nb; Ne; SPIP

Indexed keywords


EID: 84874086523     PISSN: 17524563     EISSN: 17524571     Source Type: Journal    
DOI: 10.1111/j.1752-4571.2012.00289.x     Document Type: Article
Times cited : (67)

References (25)
  • 1
    • 20144370938 scopus 로고    scopus 로고
    • SPIP 1.0: a program for simulating pedigrees and genetic data I age-structured populations
    • Anderson, E. C., and K. K. Dunham. 2005. SPIP 1.0: a program for simulating pedigrees and genetic data I age-structured populations. Molecular Ecology Notes 5:459-461.
    • (2005) Molecular Ecology Notes , vol.5 , pp. 459-461
    • Anderson, E.C.1    Dunham, K.K.2
  • 2
    • 0000565562 scopus 로고    scopus 로고
    • Effective population sizes: missing measures and missing concepts
    • Crandall, K. A., D. Posada, and D. Vasco. 1999. Effective population sizes: missing measures and missing concepts. Animal Conservation 2:317-319.
    • (1999) Animal Conservation , vol.2 , pp. 317-319
    • Crandall, K.A.1    Posada, D.2    Vasco, D.3
  • 3
    • 23444437361 scopus 로고    scopus 로고
    • Genetics and extinction
    • Frankham, R. 2005. Genetics and extinction. Biological Conservation 126:131-140.
    • (2005) Biological Conservation , vol.126 , pp. 131-140
    • Frankham, R.1
  • 4
    • 79955817281 scopus 로고    scopus 로고
    • Understanding and estimating effective population size for practical application in marine species management
    • Hare, M. P., L. Nunney, M. K. Schwartz, D. E. Ruzzante, M. Burford, R. S. Waples, K. Ruegg et al. 2011. Understanding and estimating effective population size for practical application in marine species management. Conservation Biology 25:438-449.
    • (2011) Conservation Biology , vol.25 , pp. 438-449
    • Hare, M.P.1    Nunney, L.2    Schwartz, M.K.3    Ruzzante, D.E.4    Burford, M.5    Waples, R.S.6    Ruegg, K.7
  • 5
    • 0015389841 scopus 로고
    • Effective size of populations with overlapping generations
    • Hill, W. G. 1972. Effective size of populations with overlapping generations. Theoretical Population Biology 3:278-289.
    • (1972) Theoretical Population Biology , vol.3 , pp. 278-289
    • Hill, W.G.1
  • 6
    • 0001099861 scopus 로고
    • A note on effective population size with overlapping generations
    • Hill, W. G. 1979. A note on effective population size with overlapping generations. Genetics 92:317-322.
    • (1979) Genetics , vol.92 , pp. 317-322
    • Hill, W.G.1
  • 7
    • 0028835316 scopus 로고
    • Temporal allele frequency change and estimation of effective size in populations with overlapping generations
    • Jorde, P. E., and N. Ryman. 1995. Temporal allele frequency change and estimation of effective size in populations with overlapping generations. Genetics 139:1077-1090.
    • (1995) Genetics , vol.139 , pp. 1077-1090
    • Jorde, P.E.1    Ryman, N.2
  • 8
    • 0018635658 scopus 로고
    • Allozymic variation and linkage disequilibrium in some laboratory populations of Drosophila melanogaster
    • Laurie-Ahlberg, C. C., and B. S. Weir. 1979. Allozymic variation and linkage disequilibrium in some laboratory populations of Drosophila melanogaster. Genetics 92:1295-1314.
    • (1979) Genetics , vol.92 , pp. 1295-1314
    • Laurie-Ahlberg, C.C.1    Weir, B.S.2
  • 10
    • 84856654276 scopus 로고    scopus 로고
    • Past and present processes influencing genetic diversity and effective population size in a natural population of Atlantic sturgeon
    • Moyer, G. R., J. A. Sweka, and D. L. Peterson. 2012. Past and present processes influencing genetic diversity and effective population size in a natural population of Atlantic sturgeon. Transactions of the American Fisheries Society 141:56-67.
    • (2012) Transactions of the American Fisheries Society , vol.141 , pp. 56-67
    • Moyer, G.R.1    Sweka, J.A.2    Peterson, D.L.3
  • 12
    • 0027329717 scopus 로고
    • The influence of mating system and overlapping generations on effective population size
    • Nunney, L. 1993. The influence of mating system and overlapping generations on effective population size. Evolution 47:1329-1341.
    • (1993) Evolution , vol.47 , pp. 1329-1341
    • Nunney, L.1
  • 13
    • 47649115949 scopus 로고    scopus 로고
    • Genetic estimates of contemporary effective population size: what can they tell us about the importance of genetic stochasticity for wild population persistence?
    • Palstra, F. P., and D. E. Ruzzante. 2008. Genetic estimates of contemporary effective population size: what can they tell us about the importance of genetic stochasticity for wild population persistence? Molecular Ecology 17:3428-3447.
    • (2008) Molecular Ecology , vol.17 , pp. 3428-3447
    • Palstra, F.P.1    Ruzzante, D.E.2
  • 14
    • 84863304598 scopus 로고    scopus 로고
    • R Development Core Team... ver. 2.14.2 R Foundation for Statistical Computing, Vienna, Austria. ISBN 3-900051-07-0
    • R Development Core Team. 2012. R: A Language and Environment for Statistical Computing. ver. 2.14.2 R Foundation for Statistical Computing, Vienna, Austria. ISBN 3-900051-07-0, http://www.R-project.org
    • (2012) R: A Language and Environment for Statistical Computing
  • 16
    • 77953893634 scopus 로고    scopus 로고
    • Estimation of parameters of inbreeding and genetic drift in populations with overlapping generations
    • Wang, J., P. Brekke, E. Huchard, L. A. Knapp, and G. Cowlishaw. 2010. Estimation of parameters of inbreeding and genetic drift in populations with overlapping generations. Evolution 64:1704-1718.
    • (2010) Evolution , vol.64 , pp. 1704-1718
    • Wang, J.1    Brekke, P.2    Huchard, E.3    Knapp, L.A.4    Cowlishaw, G.5
  • 17
    • 0024498122 scopus 로고
    • A generalized approach for estimating effective population size from temporal changes in allele frequency
    • Waples, R. S. 1989. A generalized approach for estimating effective population size from temporal changes in allele frequency. Genetics 121:379-391.
    • (1989) Genetics , vol.121 , pp. 379-391
    • Waples, R.S.1
  • 18
    • 0026314562 scopus 로고
    • Genetic methods for estimating the effective size of cetacean populations
    • Waples, R. S. 1991. Genetic methods for estimating the effective size of cetacean populations. Reports of the International Whaling Commission 13:279-300.
    • (1991) Reports of the International Whaling Commission , vol.13 , pp. 279-300
    • Waples, R.S.1
  • 19
    • 33644878743 scopus 로고    scopus 로고
    • Genetic estimates of contemporary effective population size: to what time periods do the estimates apply?
    • Waples, R. S. 2005. Genetic estimates of contemporary effective population size: to what time periods do the estimates apply? Molecular Ecology 14:3335-3352.
    • (2005) Molecular Ecology , vol.14 , pp. 3335-3352
    • Waples, R.S.1
  • 20
    • 77955722729 scopus 로고    scopus 로고
    • Spatial-temporal stratifications in natural populations and how they affect understanding and estimation of effective population size
    • Waples, R. S. 2010. Spatial-temporal stratifications in natural populations and how they affect understanding and estimation of effective population size. Molecular Ecology Resources 10:785-796.
    • (2010) Molecular Ecology Resources , vol.10 , pp. 785-796
    • Waples, R.S.1
  • 21
    • 47249162403 scopus 로고    scopus 로고
    • LDNE: a program for estimating effective population size from data on linkage disequilibrium
    • Waples, R. S., and C. Do. 2008. LDNE: a program for estimating effective population size from data on linkage disequilibrium. Molecular Ecology Resources 8:753-756.
    • (2008) Molecular Ecology Resources , vol.8 , pp. 753-756
    • Waples, R.S.1    Do, C.2
  • 22
    • 77954278662 scopus 로고    scopus 로고
    • Linkage disequilibrium estimates of contemporary Ne using highly variable genetic markers: a largely untapped resource for applied conservation and evolution
    • Waples, R. S., and C. Do. 2010. Linkage disequilibrium estimates of contemporary Ne using highly variable genetic markers: a largely untapped resource for applied conservation and evolution. Evolutionary Applications 3:244-262.
    • (2010) Evolutionary Applications , vol.3 , pp. 244-262
    • Waples, R.S.1    Do, C.2
  • 23
    • 33846483038 scopus 로고    scopus 로고
    • Temporal estimates of effective population size in species with overlapping generations
    • Waples, R. S., and M. Yokota. 2007. Temporal estimates of effective population size in species with overlapping generations. Genetics 175:219-233.
    • (2007) Genetics , vol.175 , pp. 219-233
    • Waples, R.S.1    Yokota, M.2
  • 24
    • 79960442320 scopus 로고    scopus 로고
    • Calculating Ne and Ne/N in age-structured populations: a hybrid Felsenstein-Hill approach
    • Waples, R. S., C. Do, and J. Chopelet. 2011. Calculating Ne and Ne/N in age-structured populations: a hybrid Felsenstein-Hill approach. Ecology 92:1513-1522.
    • (2011) Ecology , vol.92 , pp. 1513-1522
    • Waples, R.S.1    Do, C.2    Chopelet, J.3
  • 25
    • 0001771498 scopus 로고
    • Evolution in Mendelian populations
    • Wright, S. 1931. Evolution in Mendelian populations. Genetics 16:97-159.
    • (1931) Genetics , vol.16 , pp. 97-159
    • Wright, S.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.