-
1
-
-
33744756660
-
Bacteroides finegoldii sp. nov., isolated from human faeces
-
Bakir, M. A., Kitahara, M., Sakamoto, M., Matsumoto, M. & Benno, Y. (2006). Bacteroides finegoldii sp. nov., isolated from human faeces. Int J Syst Evol Microbiol 56, 931-935.
-
(2006)
Int J Syst Evol Microbiol
, vol.56
, pp. 931-935
-
-
Bakir, M.A.1
Kitahara, M.2
Sakamoto, M.3
Matsumoto, M.4
Benno, Y.5
-
2
-
-
47249142417
-
Bacteroides xylanisolvens sp. nov., a xylan-degrading bacterium isolated from human faeces
-
Chassard, C., Delmas, E., Lawson, P. A. & Bernalier-Donadille, A. (2008). Bacteroides xylanisolvens sp. nov., a xylan-degrading bacterium isolated from human faeces. Int J Syst Evol Microbiol 58, 1008-1013.
-
(2008)
Int J Syst Evol Microbiol
, vol.58
, pp. 1008-1013
-
-
Chassard, C.1
Delmas, E.2
Lawson, P.A.3
Bernalier-Donadille, A.4
-
3
-
-
0000461280
-
Confidence limits of phylogenies: An approach using the bootstrap
-
Felsenstein, J. (1985). Confidence limits of phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
4
-
-
0242578620
-
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
-
Guindon, S. & Gascuel, O. (2003). A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52, 696-704.
-
(2003)
Syst Biol
, vol.52
, pp. 696-704
-
-
Guindon, S.1
Gascuel, O.2
-
5
-
-
0003535096
-
-
4th edn. Blacksburg, VA: Virginia Polytechnic Institute and State University
-
Holdeman, L. V., Cato, E. P. & Moore, W. E. C. (1977). Anaerobe Laboratory Manual, 4th edn. Blacksburg, VA: Virginia Polytechnic Institute and State University.
-
(1977)
Anaerobe Laboratory Manual
-
-
Holdeman, L.V.1
Cato, E.P.2
Moore, W.E.C.3
-
6
-
-
78649308644
-
Bacteroides faecis sp. nov., isolated from human faeces
-
Kim, M.-S., Roh, S. W. & Bae, J.-W. (2010). Bacteroides faecis sp. nov., isolated from human faeces. Int J Syst Evol Microbiol 60, 2572-2576.
-
(2010)
Int J Syst Evol Microbiol
, vol.60
, pp. 2572-2576
-
-
Kim, M.-S.1
Roh, S.W.2
Bae, J.-W.3
-
7
-
-
0019296687
-
A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
-
Kimura, M. (1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16, 111-120.
-
(1980)
J Mol Evol
, vol.16
, pp. 111-120
-
-
Kimura, M.1
-
8
-
-
77956800518
-
Lipid and cell-wall analysis in bacterial systematics
-
Komagata, K. & Suzuki, K. (1987). Lipid and cell-wall analysis in bacterial systematics. Methods Microbiol 19, 161-207.
-
(1987)
Methods Microbiol
, vol.19
, pp. 161-207
-
-
Komagata, K.1
Suzuki, K.2
-
9
-
-
0023752959
-
Fatty acids, antibiotic resistance, and deoxyribonucleic acid homology groups of Bradyrhizobium japonicum
-
Kuykendall, L. D., Roy, M. A., O'neill, J. J. & Devine, T. E. (1988). Fatty acids, antibiotic resistance, and deoxyribonucleic acid homology groups of Bradyrhizobium japonicum. Int J Syst Bacteriol 38, 358-361.
-
(1988)
Int J Syst Bacteriol
, vol.38
, pp. 358-361
-
-
Kuykendall, L.D.1
Roy, M.A.2
O'Neill, J.J.3
Devine, T.E.4
-
10
-
-
36448991500
-
CLUSTAL W and CLUSTAL_X version 2.0
-
other authors
-
Larkin, M. A., Blackshields, G., Brown, N. P., Chenna, R., McGettigan, P. A., McWilliam, H., Valentin, F., Wallace, I. M., Wilm, A. & other authors (2007). CLUSTAL W and CLUSTAL_X version 2.0. Bioinformatics 23, 2947-2948.
-
(2007)
Bioinformatics
, vol.23
, pp. 2947-2948
-
-
Larkin, M.A.1
Blackshields, G.2
Brown, N.P.3
Chenna, R.4
McGettigan, P.A.5
McWilliam, H.6
Valentin, F.7
Wallace, I.M.8
Wilm, A.9
-
11
-
-
85010439719
-
A procedure for the isolation of deoxyribonucleic acid from microorganisms
-
Marmur, J. (1961). A procedure for the isolation of deoxyribonucleic acid from microorganisms. J Mol Biol 3, 208-218.
-
(1961)
J Mol Biol
, vol.3
, pp. 208-218
-
-
Marmur, J.1
-
12
-
-
0020056285
-
Identification of Bacteroides species by cellular fatty acid profiles
-
Mayberry, W. R., Lambe, D. W., Jr & Ferguson, K. P. (1982). Identification of Bacteroides species by cellular fatty acid profiles. Int J Syst Bacteriol 32, 21-27.
-
(1982)
Int J Syst Bacteriol
, vol.32
, pp. 21-27
-
-
Mayberry, W.R.1
Lambe Jr., D.W.2
Ferguson, K.P.3
-
13
-
-
33744740107
-
The study of obligately anaerobic bacteria
-
Edited by M. J. Pelczar & other authors. New York: McGraw-Hill
-
McClung, L. S. & Lindberg, R. B. (1957). The study of obligately anaerobic bacteria. In Manual of Microbiological Methods, pp. 120-139. Edited by M. J. Pelczar & other authors. New York: McGraw-Hill.
-
(1957)
Manual of Microbiological Methods
, pp. 120-139
-
-
McClung, L.S.1
Lindberg, R.B.2
-
14
-
-
0019982011
-
Single derivatization method for routine analysis of bacterial whole-cell fatty acid methyl esters, including hydroxy acids
-
Miller, L. T. (1982). Single derivatization method for routine analysis of bacterial whole-cell fatty acid methyl esters, including hydroxy acids. J Clin Microbiol 16, 584-586.
-
(1982)
J Clin Microbiol
, vol.16
, pp. 584-586
-
-
Miller, L.T.1
-
15
-
-
0018423505
-
Cellular fatty acid composition in gram-negative obligately anaerobic rods
-
Miyagawa, E., Azuma, R. & Suto, T. (1979). Cellular fatty acid composition in gram-negative obligately anaerobic rods. J Gen Appl Microbiol 25, 41-51.
-
(1979)
J Gen Appl Microbiol
, vol.25
, pp. 41-51
-
-
Miyagawa, E.1
Azuma, R.2
Suto, T.3
-
16
-
-
84873099155
-
Diversity, structure, and evolution of the termite gut microbial community
-
Edited by D. E. Bignell, Y. Roisin & N. Lo. Dordrecht: Springer
-
Ohkuma, M. & Brune, A. (2011). Diversity, structure, and evolution of the termite gut microbial community. In Biology of Termites: a Modern Synthesis, pp. 413-438. Edited by D. E. Bignell, Y. Roisin & N. Lo. Dordrecht: Springer.
-
(2011)
Biology of Termites: A Modern Synthesis
, pp. 413-438
-
-
Ohkuma, M.1
Brune, A.2
-
17
-
-
0036369407
-
Diverse bacteria related to the bacteroides subgroup of the CFB phylum within the gut symbiotic communities of various termites
-
Ohkuma, M., Noda, S., Hongoh, Y. & Kudo, T. (2002). Diverse bacteria related to the bacteroides subgroup of the CFB phylum within the gut symbiotic communities of various termites. Biosci Biotechnol Biochem 66, 78-84.
-
(2002)
Biosci Biotechnol Biochem
, vol.66
, pp. 78-84
-
-
Ohkuma, M.1
Noda, S.2
Hongoh, Y.3
Kudo, T.4
-
18
-
-
45849154165
-
jModelTest: Phylogenetic model averaging
-
Posada, D. (2008). jModelTest: phylogenetic model averaging. Mol Biol Evol 25, 1253-1256.
-
(2008)
Mol Biol Evol
, vol.25
, pp. 1253-1256
-
-
Posada, D.1
-
19
-
-
50549178319
-
Preparation of transforming deoxyribonucleic acid by phenol treatment
-
Saito, H. & Miura, K. I. (1963). Preparation of transforming deoxyribonucleic acid by phenol treatment. Biochim Biophys Acta 72, 619-629.
-
(1963)
Biochim Biophys Acta
, vol.72
, pp. 619-629
-
-
Saito, H.1
Miura, K.I.2
-
20
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
-
(1987)
Mol Biol Evol
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
21
-
-
33746346757
-
Reclassification of Bacteroides distasonis, Bacteroides goldsteinii and Bacteroides merdae as Parabacteroides distasonis gen. nov., comb. nov., Parabacteroides goldsteinii comb. nov. and Parabacteroides merdae comb. nov
-
Sakamoto, M. & Benno, Y. (2006). Reclassification of Bacteroides distasonis, Bacteroides goldsteinii and Bacteroides merdae as Parabacteroides distasonis gen. nov., comb. nov., Parabacteroides goldsteinii comb. nov. and Parabacteroides merdae comb. nov. Int J Syst Evol Microbiol 56, 1599-1605.
-
(2006)
Int J Syst Evol Microbiol
, vol.56
, pp. 1599-1605
-
-
Sakamoto, M.1
Benno, Y.2
-
22
-
-
78049495073
-
Usefulness of the hsp60 gene for the identification and classification of Gram-negative anaerobic rods
-
Sakamoto, M. & Ohkuma, M. (2010). Usefulness of the hsp60 gene for the identification and classification of Gram-negative anaerobic rods. J Med Microbiol 59, 1293-1302.
-
(2010)
J Med Microbiol
, vol.59
, pp. 1293-1302
-
-
Sakamoto, M.1
Ohkuma, M.2
-
23
-
-
0035989525
-
Reclassification of Bacteroides forsythus (Tanner et al. 1986) as Tannerella forsythensis corrig., gen. nov., comb. nov
-
Sakamoto, M., Suzuki, M., Umeda, M., Ishikawa, I. & Benno, Y. (2002). Reclassification of Bacteroides forsythus (Tanner et al. 1986) as Tannerella forsythensis corrig., gen. nov., comb. nov. Int J Syst Evol Microbiol 52, 841-849.
-
(2002)
Int J Syst Evol Microbiol
, vol.52
, pp. 841-849
-
-
Sakamoto, M.1
Suzuki, M.2
Umeda, M.3
Ishikawa, I.4
Benno, Y.5
-
24
-
-
16844378442
-
Prevotella multiformis sp. nov., isolated from human subgingival plaque
-
Sakamoto, M., Huang, Y., Umeda, M., Ishikawa, I. & Benno, Y. (2005). Prevotella multiformis sp. nov., isolated from human subgingival plaque. Int J Syst Evol Microbiol 55, 815-819.
-
(2005)
Int J Syst Evol Microbiol
, vol.55
, pp. 815-819
-
-
Sakamoto, M.1
Huang, Y.2
Umeda, M.3
Ishikawa, I.4
Benno, Y.5
-
25
-
-
78149334379
-
hsp60 and 16S rRNA gene sequence relationships among species of the genus Bacteroides with the finding that Bacteroides suis and Bacteroides tectus are heterotypic synonyms of Bacteroides pyogenes
-
Sakamoto, M., Suzuki, N. & Benno, Y. (2010). hsp60 and 16S rRNA gene sequence relationships among species of the genus Bacteroides with the finding that Bacteroides suis and Bacteroides tectus are heterotypic synonyms of Bacteroides pyogenes. Int J Syst Evol Microbiol 60, 2984-2990.
-
(2010)
Int J Syst Evol Microbiol
, vol.60
, pp. 2984-2990
-
-
Sakamoto, M.1
Suzuki, N.2
Benno, Y.3
-
26
-
-
0000240137
-
The genus Bacteroides and related taxa
-
2nd edn, Edited by A. Balows, H. G. Truper, M. Dworkin, W. Harder & K. H. Schleifer. New York: Springer
-
Shah, H. N. (1992). The genus Bacteroides and related taxa. In The Prokaryotes, 2nd edn, pp. 3593-3607. Edited by A. Balows, H. G. Truper, M. Dworkin, W. Harder & K. H. Schleifer. New York: Springer.
-
(1992)
The Prokaryotes
, pp. 3593-3607
-
-
Shah, H.N.1
-
27
-
-
0018874185
-
Fatty acid and isoprenoid quinone composition in the classification of Bacteroides melaninogenicus and related taxa
-
Shah, H. N. & Collins, M. D. (1980). Fatty acid and isoprenoid quinone composition in the classification of Bacteroides melaninogenicus and related taxa. J Appl Bacteriol 48, 75-87.
-
(1980)
J Appl Bacteriol
, vol.48
, pp. 75-87
-
-
Shah, H.N.1
Collins, M.D.2
-
28
-
-
0021012378
-
Genus Bacteroides. A chemotaxonomical perspective
-
Shah, H. N. & Collins, M. D. (1983). Genus Bacteroides. A chemotaxonomical perspective. J Appl Bacteriol 55, 403-416.
-
(1983)
J Appl Bacteriol
, vol.55
, pp. 403-416
-
-
Shah, H.N.1
Collins, M.D.2
-
29
-
-
0028028182
-
Taxonomic note: A place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology
-
Stackebrandt, E. & Goebel, B. M. (1994). Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44, 846-849.
-
(1994)
Int J Syst Bacteriol
, vol.44
, pp. 846-849
-
-
Stackebrandt, E.1
Goebel, B.M.2
-
30
-
-
0021715576
-
Determination of DNA base composition by reversed-phase high-performance liquid chromatography
-
Tamaoka, J. & Komagata, K. (1984). Determination of DNA base composition by reversed-phase high-performance liquid chromatography. FEMS Microbiol Lett 25, 125-128.
-
(1984)
FEMS Microbiol Lett
, vol.25
, pp. 125-128
-
-
Tamaoka, J.1
Komagata, K.2
-
31
-
-
84862648916
-
Isolation and characterization of anaerobic bacteria for symbiotic recycling of uric acid nitrogen in the gut of various termites
-
Thong-On, A., Suzuki, K., Noda, S., Inoue, J., Kajiwara, S. & Ohkuma, M. (2012). Isolation and characterization of anaerobic bacteria for symbiotic recycling of uric acid nitrogen in the gut of various termites. Microbes Environ 27, 186-192.
-
(2012)
Microbes Environ
, vol.27
, pp. 186-192
-
-
Thong-On, A.1
Suzuki, K.2
Noda, S.3
Inoue, J.4
Kajiwara, S.5
Ohkuma, M.6
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