A Lectin-Based Glycomic Approach to Identify Characteristic Features of Xenopus Embryogenesis

PLoS ONE

Volumn 8, Issue 2, 2013, Pages

  Onuma, Yasuko ^a   Tateno, Hiroaki ^a   Tsuji, Shingo ^b   Hirabayashi, Jun ^a   Ito, Yuzuru ^a   Asashima, Makoto ^a  

^a NATIONAL INSTITUTE OF ADVANCED INDUSTRIAL SCIENCE AND TECHNOLOGY AIST   (Japan)

^b UNIVERSITY OF TOKYO   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

ALPHA 1,3 FUCOSYLTRANSFERASE; ALPHA 1,3 GALACTOSYLTRANSFERASE; GLYCAN; GLYCOSYLTRANSFERASE; LECTIN; N ACETYLGALACTOSAMINYLTRANSFERASE;

ALPHA N ACETYLGALACTOSAMINYLTRANSFERASE GENE; ALPHA1,2 FUCOSYLTRANSFERASE GENE; ALPHA1,3 GALACTOSYLTRANSFERASE GENE; ARTICLE; CLUSTER ANALYSIS; DEVELOPMENTAL STAGE; DNA MICROARRAY; EMBRYO; EMBRYO DEVELOPMENT; GALNT1 GENE; GALNT3 GENE; GALNT7 GENE; GENE; GENE EXPRESSION; GLYCOBIOLOGY; MANNOSIDE ACETYLGLUCOSAMINYLTRANSFERASE 1 GENE; NONHUMAN; XENOPUS LAEVIS;

ANIMALS; EMBRYONIC DEVELOPMENT; GENE EXPRESSION PROFILING; GLYCOMICS; GLYCOSYLTRANSFERASES; LECTINS; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; XENOPUS;

EID: 84874003262     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0056581     Document Type: Article

References (14)

1. Kuno A, Uchiyama N, Koseki-Kuno S, Ebe Y, Takashima S, et al. (2005) Evanescent-field fluorescence-assisted lectin microarray: a new strategy for glycan profiling. Nat Methods 2: 851-856.
2. Narimatsu H, Sawaki H, Kuno A, Kaji H, Ito H, et al. (2010) A strategy for discovery of cancer glyco-biomarkers in serum using newly developed technologies for glycoproteomics. FEBS J 277: 95-105.
3. Sive HL, Grainger RM and Harland RM (2000) Early Development of Xenopus laevis: A Laboratory Manual. Cold Spring Harbor: Cold Spring Harbor Laboratory Press.
4. Nieuwkoop PD, Faber J (1956) Normal Table of Xenopus laevis (Daudin). Amsterdam: North-Holland Publishing Company.
5. Tateno H, Kuno A, Itakura Y, Hirabayashi J, (2010) A versatile technology for cellular glycomics using lectin microarray. Methods Enzymol 478: 181-95.
6. Tateno H, Toyota M, Saito S, Onuma Y, Ito Y, et al. (2011) Glycome diagnosis of human induced pluripotent stem cells using lectin microarray. J Biol Chem 286: 20345-53.
7. Yeo C, Whitman M, (2001) Nodal signals to Smads through Cripto-dependent and Cripto-independent mechanisms. Mol Cell 7: 949-957.
8. Narimatsu H, (2004) Construction of a human glycogene library and comprehensive functional analysis. Glycoconj J 21: 17-24.
9. Bowes JB, Snyder KA, Segerdell E, Gibb R, Jarabek CJ, et al. (2008) Xenbase: a Xenopus biology and genomics resource. Nucleic Acids Res 36 (Database issue): D761-767.
10. Nomura K, Nakajo N, Hidari KI, Nomura H, Murata M, et al. (1995) Occurrence of a novel fucose-containing pentaglycosylceramide with blood-group-B active determinant in Xenopus blastula cells: its possible involvement in cell-cell adhesion. Biochem J 306: 821-827.
11. Nomura KH, Kobayashi R, Hirabayashi Y, Fujisue-Sakai M, Mizuguchi S, et al. (1998) Involvement of blood-group-B-active trisaccharides in Ca2+-dependent cell-cell adhesion in the Xenopus blastula. Dev Genes Evol 208: 9-18.
12. Ten Hagen KG, Fritz TA, Tabak LA, (2003) All in the family: the UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferases. Glycobiology 13: 1R-16R.
13. Tsuboi S, Hatakeyama S, Ohyama C, Fukuda M, (2012) Two opposing roles of O-glycans in tumor metastasis. Trends Mol Med 18: 224-232.
14. Fakhro KA, Choi M, Ware SM, Belmont JW, Towbin JA, et al. (2011) Rare copy number variations in congenital heart disease patients identify unique genes in left-right patterning. Proc Natl Acad Sci USA 108: 2915-2920.