-
1
-
-
0025183708
-
Basic local alignment search tool
-
Altschul S.F., Gish W., Miller W., Myers E.W., Lipman D.J. Basic local alignment search tool. J. Mol. Biol. 1990, 215:403-410.
-
(1990)
J. Mol. Biol.
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
2
-
-
11244348953
-
Development of nonsteroidal anti-inflammatory drug analogs and steroid carboxylates selective for human aldo-keto reductase isoforms: potential antineoplastic agents that work independently of cyclooxygenase isozymes
-
Bauman D.R., Rudnick S.I., Szewczuk L.M., Jin Y., Gopishetty S., Penning T.M. Development of nonsteroidal anti-inflammatory drug analogs and steroid carboxylates selective for human aldo-keto reductase isoforms: potential antineoplastic agents that work independently of cyclooxygenase isozymes. Mol. Pharmacol. 2005, 67:60-68.
-
(2005)
Mol. Pharmacol.
, vol.67
, pp. 60-68
-
-
Bauman, D.R.1
Rudnick, S.I.2
Szewczuk, L.M.3
Jin, Y.4
Gopishetty, S.5
Penning, T.M.6
-
3
-
-
42249095068
-
Real-time PCR quantification of PAH-ring hydroxylating dioxygenase (PAH-RHDa) genes from Gram positive and Gram negative bacteria in soil and sediment samples
-
Cebron A., Norini M.-P., Beguiristain T., Leyval C. Real-time PCR quantification of PAH-ring hydroxylating dioxygenase (PAH-RHDa) genes from Gram positive and Gram negative bacteria in soil and sediment samples. J. Microbiol. Methods 2008, 73:148-159.
-
(2008)
J. Microbiol. Methods
, vol.73
, pp. 148-159
-
-
Cebron, A.1
Norini, M.-P.2
Beguiristain, T.3
Leyval, C.4
-
4
-
-
33847168352
-
Degradation of polycyclic aromatic hydrocarbons
-
Cerniglia C.E. Degradation of polycyclic aromatic hydrocarbons. Biodegradation 1992, 3:351-368.
-
(1992)
Biodegradation
, vol.3
, pp. 351-368
-
-
Cerniglia, C.E.1
-
6
-
-
0026478831
-
Bacterial metabolism of naphthalene: construction and use of recombinant bacteria to study ring cleavage of 1,2-dihydroxynaphthalene and subsequent reactions
-
Eaton R.W., Chapman P.J. Bacterial metabolism of naphthalene: construction and use of recombinant bacteria to study ring cleavage of 1,2-dihydroxynaphthalene and subsequent reactions. J. Bacteriol. 1992, 174:7542-7554.
-
(1992)
J. Bacteriol.
, vol.174
, pp. 7542-7554
-
-
Eaton, R.W.1
Chapman, P.J.2
-
7
-
-
0020612907
-
Expression of naphthalene oxidation genes in Escherichia coli results in the biosynthesis of indigo
-
Ensley B.D., Ratzkin B.J., Osslund T.D., Simon M.J., Wackett L.P., Gibson D.T. Expression of naphthalene oxidation genes in Escherichia coli results in the biosynthesis of indigo. Science 1983, 222:167-169.
-
(1983)
Science
, vol.222
, pp. 167-169
-
-
Ensley, B.D.1
Ratzkin, B.J.2
Osslund, T.D.3
Simon, M.J.4
Wackett, L.P.5
Gibson, D.T.6
-
8
-
-
78649512332
-
Degradation of phenanthrene via meta-cleavage of 2-hydroxy-1-naphthoic acid by Ochrobactrum sp. Strain PWTJD
-
Ghosal D., Chakraborty J., Khara P., Dutta T.K. Degradation of phenanthrene via meta-cleavage of 2-hydroxy-1-naphthoic acid by Ochrobactrum sp. Strain PWTJD. FEMS Microbiol. Lett. 2010, 313:103-110.
-
(2010)
FEMS Microbiol. Lett.
, vol.313
, pp. 103-110
-
-
Ghosal, D.1
Chakraborty, J.2
Khara, P.3
Dutta, T.K.4
-
9
-
-
22144462156
-
Degradation of toluene inhibition of methyl bromide biodegradation in seawater and isolation of a marine toluene oxidizer that degrades methyl bromide
-
Goodwin K.D., Tokaczyk R., Stephens F.C., Saltzman E.S. Degradation of toluene inhibition of methyl bromide biodegradation in seawater and isolation of a marine toluene oxidizer that degrades methyl bromide. Appl. Environ. Microbiol. 2005, 71:3495-3503.
-
(2005)
Appl. Environ. Microbiol.
, vol.71
, pp. 3495-3503
-
-
Goodwin, K.D.1
Tokaczyk, R.2
Stephens, F.C.3
Saltzman, E.S.4
-
10
-
-
0000174946
-
Genus III: Acinetobacter Brisou et Prévôt 1954
-
Williams and Wilkins, Baltimore
-
Juni E. Genus III: Acinetobacter Brisou et Prévôt 1954. Bergey's Manual of Systematic Bacteriology 1984, vol. 1:303-307. Williams and Wilkins, Baltimore,.
-
(1984)
Bergey's Manual of Systematic Bacteriology
, vol.1
, pp. 303-307
-
-
Juni, E.1
-
12
-
-
0027602210
-
Microbial degradation of polycyclic aromatic hydrocarbons acenaphthene and acenaphthylene by a pure bacterial culture
-
Komatsu T., Omori T., Kodama T. Microbial degradation of polycyclic aromatic hydrocarbons acenaphthene and acenaphthylene by a pure bacterial culture. Biosci. Biotech. Biochem. 1993, 57:864-865.
-
(1993)
Biosci. Biotech. Biochem.
, vol.57
, pp. 864-865
-
-
Komatsu, T.1
Omori, T.2
Kodama, T.3
-
13
-
-
33747142661
-
Functional and transcriptional analyses of the initial oxygenase genes for acenaphthene degradation from Sphingomonas sp. strain A4
-
Kouzuma A., Pinyankong O., Nojiri H., Omori T., Yamane H., Habe H. Functional and transcriptional analyses of the initial oxygenase genes for acenaphthene degradation from Sphingomonas sp. strain A4. Microbiology 2006, 152:2455-2467.
-
(2006)
Microbiology
, vol.152
, pp. 2455-2467
-
-
Kouzuma, A.1
Pinyankong, O.2
Nojiri, H.3
Omori, T.4
Yamane, H.5
Habe, H.6
-
14
-
-
78651393911
-
Role of oxygenases in guiding diverse metabolic pathways in the bacterial degradation of low-molecular-weight polycyclic aromatic hydrocarbons: a review
-
Mallick S., Chakraborty J., Dutta T.K. Role of oxygenases in guiding diverse metabolic pathways in the bacterial degradation of low-molecular-weight polycyclic aromatic hydrocarbons: a review. Crit. Rev. Microbiol. 2011, 37:64-90.
-
(2011)
Crit. Rev. Microbiol.
, vol.37
, pp. 64-90
-
-
Mallick, S.1
Chakraborty, J.2
Dutta, T.K.3
-
15
-
-
34447529272
-
A novel degradation pathway in the assimilation of phenanthrene by Staphylococcus sp. strain PN/Y via meta-cleavage of 2-hydroxy-1-naphthoic acid: formation of trans-2,3-dioxo-5-(20-hydroxyphenyl)-pent-4-enoic acid
-
Mallick S., Chatterjee S., Dutta T.K. A novel degradation pathway in the assimilation of phenanthrene by Staphylococcus sp. strain PN/Y via meta-cleavage of 2-hydroxy-1-naphthoic acid: formation of trans-2,3-dioxo-5-(20-hydroxyphenyl)-pent-4-enoic acid. Microbiology 2007, 153:2104-2115.
-
(2007)
Microbiology
, vol.153
, pp. 2104-2115
-
-
Mallick, S.1
Chatterjee, S.2
Dutta, T.K.3
-
16
-
-
12644312578
-
Oxidation of long-chain and related alcohols to carbonyls by dimethyl sulfoxide " activated" by oxalyl chloride
-
Mancuso A.J., Huang S.-L., Swern D. Oxidation of long-chain and related alcohols to carbonyls by dimethyl sulfoxide " activated" by oxalyl chloride. J. Org. Chem. 1978, 43:2480-2482.
-
(1978)
J. Org. Chem.
, vol.43
, pp. 2480-2482
-
-
Mancuso, A.J.1
Huang, S.-L.2
Swern, D.3
-
17
-
-
0034936129
-
Effect of a complex environmental mixture from coal tar containing polycyclic aromatic hydrocarbons (PAH) on tumor initiation, PAH-DNA binding and metabolic activation of carcinogenic PAH in mouse epidermis
-
Marston C.P., Pereira Z.C., Ferguson J., Fischer L., Hedstrom O., Dashwood W.M., Baird W.M. Effect of a complex environmental mixture from coal tar containing polycyclic aromatic hydrocarbons (PAH) on tumor initiation, PAH-DNA binding and metabolic activation of carcinogenic PAH in mouse epidermis. Carcinogenesis 2001, 22:1077-1086.
-
(2001)
Carcinogenesis
, vol.22
, pp. 1077-1086
-
-
Marston, C.P.1
Pereira, Z.C.2
Ferguson, J.3
Fischer, L.4
Hedstrom, O.5
Dashwood, W.M.6
Baird, W.M.7
-
19
-
-
0024748337
-
Creosote-contaminated sites, their potential for bioremediation
-
Mueller J.G., Chapman P.J., Pritchard P.H. Creosote-contaminated sites, their potential for bioremediation. Environ. Sci. Technol. 1989, 23:1197-1201.
-
(1989)
Environ. Sci. Technol.
, vol.23
, pp. 1197-1201
-
-
Mueller, J.G.1
Chapman, P.J.2
Pritchard, P.H.3
-
20
-
-
70350259639
-
Metabolism of acenaphthylene via 1,2-dihydroxynaphthalene and catechol by Stenotrophomonas sp. RMSK
-
Nayak A.S., Veeranagouda Y., Lee K., Karegoudar T.B. Metabolism of acenaphthylene via 1,2-dihydroxynaphthalene and catechol by Stenotrophomonas sp. RMSK. Biodegradation 2009, 20:837-843.
-
(2009)
Biodegradation
, vol.20
, pp. 837-843
-
-
Nayak, A.S.1
Veeranagouda, Y.2
Lee, K.3
Karegoudar, T.B.4
-
21
-
-
79955132142
-
Genotypic and phenotypic characterization of the Acinetobacter calcoaceticuse-Acinetobacter baumannii complex with the proposal of Acinetobacter pittii sp. nov. (formerly Acinetobacter genomic species 3) and Acinetobacter nosocomialis sp. nov. (formerly Acinetobacter genomic species 13TU)
-
Nemec A., Krizova L., Maixnerova M., van der Reijden T.J.K., Deschaght P., Passet V., Vaneechoutte M., Brisse S., Dijkshoorn L. Genotypic and phenotypic characterization of the Acinetobacter calcoaceticuse-Acinetobacter baumannii complex with the proposal of Acinetobacter pittii sp. nov. (formerly Acinetobacter genomic species 3) and Acinetobacter nosocomialis sp. nov. (formerly Acinetobacter genomic species 13TU). Res. Microbiol. 2011, 162:393-404.
-
(2011)
Res. Microbiol.
, vol.162
, pp. 393-404
-
-
Nemec, A.1
Krizova, L.2
Maixnerova, M.3
van der Reijden, T.J.K.4
Deschaght, P.5
Passet, V.6
Vaneechoutte, M.7
Brisse, S.8
Dijkshoorn, L.9
-
22
-
-
77950625408
-
Acinetobacter bereziniae sp. nov. and Acinetobacter guillouiae sp. nov., to accommodate Acinetobacter genomic species 10 and 11, respectively
-
Nemec A., Musilek M., Sedo O., Baere T.D., Maixnerova M., Reijden T.J.K., Zdrahal Z.K., Vaneechoutte M., Dijkshoorn L. Acinetobacter bereziniae sp. nov. and Acinetobacter guillouiae sp. nov., to accommodate Acinetobacter genomic species 10 and 11, respectively. Int. J. Syst. Evol. Microbiol. 2010, 60:896-903.
-
(2010)
Int. J. Syst. Evol. Microbiol.
, vol.60
, pp. 896-903
-
-
Nemec, A.1
Musilek, M.2
Sedo, O.3
Baere, T.D.4
Maixnerova, M.5
Reijden, T.J.K.6
Zdrahal, Z.K.7
Vaneechoutte, M.8
Dijkshoorn, L.9
-
23
-
-
0025184962
-
Catechol and chlorocatechol 1,2-dioxygenases
-
Ngai K.L., Neidle E.L., Ornston L.N. Catechol and chlorocatechol 1,2-dioxygenases. Methods Enzymol. 1990, 188:122-126.
-
(1990)
Methods Enzymol.
, vol.188
, pp. 122-126
-
-
Ngai, K.L.1
Neidle, E.L.2
Ornston, L.N.3
-
24
-
-
32744459401
-
Oxidation of alcohols by activated dimethyl sulfoxide. A preparative, steric and mechanistic study
-
Omura K., Swern D. Oxidation of alcohols by activated dimethyl sulfoxide. A preparative, steric and mechanistic study. Tetrahedron 1978, 34:1651.
-
(1978)
Tetrahedron
, vol.34
, pp. 1651
-
-
Omura, K.1
Swern, D.2
-
25
-
-
4444336512
-
Isolation and characterization of genes encoding polycyclic aromatic hydrocarbon dioxygenase from acenaphthene and acenaphthylene degrading Sphingomonas sp. strain A4
-
Pinyakong O., Habe H., Kouzuma A., Nojiri H., Yamane H., Omori T. Isolation and characterization of genes encoding polycyclic aromatic hydrocarbon dioxygenase from acenaphthene and acenaphthylene degrading Sphingomonas sp. strain A4. FEMS Microbiol. Lett. 2004, 238:297-305.
-
(2004)
FEMS Microbiol. Lett.
, vol.238
, pp. 297-305
-
-
Pinyakong, O.1
Habe, H.2
Kouzuma, A.3
Nojiri, H.4
Yamane, H.5
Omori, T.6
-
26
-
-
84873993348
-
2,6-Naphthalenedicarboxylic acid
-
Raecke B., Schirp H. 2,6-Naphthalenedicarboxylic acid. Org. Synth. 1960, 40:71.
-
(1960)
Org. Synth.
, vol.40
, pp. 71
-
-
Raecke, B.1
Schirp, H.2
-
27
-
-
0021210237
-
Bacterial oxidation of the polycyclic aromatic hydrocarbons acenaphthene and acenaphthylene
-
Schocken M.J., Gibson D.T. Bacterial oxidation of the polycyclic aromatic hydrocarbons acenaphthene and acenaphthylene. Appl. Environ. Microbiol. 1984, 48:10-16.
-
(1984)
Appl. Environ. Microbiol.
, vol.48
, pp. 10-16
-
-
Schocken, M.J.1
Gibson, D.T.2
-
28
-
-
0030034501
-
Oxidation of naphthenoaromatic and methyl-substituted aromatic compounds naphthalene 1,2-dioxygenase
-
Selifonov S.A., Grifoll M., Eaton R.W., Chapman P.J. Oxidation of naphthenoaromatic and methyl-substituted aromatic compounds naphthalene 1,2-dioxygenase. Appl. Environ. Microbiol. 1996, 62:507-514.
-
(1996)
Appl. Environ. Microbiol.
, vol.62
, pp. 507-514
-
-
Selifonov, S.A.1
Grifoll, M.2
Eaton, R.W.3
Chapman, P.J.4
-
29
-
-
0008415190
-
Acenaphthene catabolism by strains of Alcaligenes eutrophus and Alcaligenes paradoxus
-
Selifonov S.A., Slepen'kin A.V., Adanin V.M., Grechkina G.M., Starovoitov I.I. Acenaphthene catabolism by strains of Alcaligenes eutrophus and Alcaligenes paradoxus. Microbiology 1993, 62:85-92.
-
(1993)
Microbiology
, vol.62
, pp. 85-92
-
-
Selifonov, S.A.1
Slepen'kin, A.V.2
Adanin, V.M.3
Grechkina, G.M.4
Starovoitov, I.I.5
-
30
-
-
0034902632
-
Biodegradation of polycyclic aromatic hydrocarbons by Sphingomonas strains isolated from the terrestrial subsurface
-
Shi T., Fredrickson J.K., Balkwill D.L. Biodegradation of polycyclic aromatic hydrocarbons by Sphingomonas strains isolated from the terrestrial subsurface. J. Ind. Microbiol. Biotechnol. 2001, 26:283-289.
-
(2001)
J. Ind. Microbiol. Biotechnol.
, vol.26
, pp. 283-289
-
-
Shi, T.1
Fredrickson, J.K.2
Balkwill, D.L.3
-
31
-
-
33748793069
-
Novel intermediates of acenaphthylene degradation by Rhizobium sp. Strain CU-A1: evidence for naphthalene-1, 8-dicarboxylic acid metabolism
-
Siriwat P., Kobchai P., Sarunya P., Thanyanuch K., Kanchana J., Suthep T., Amorn P., Pairoh P. Novel intermediates of acenaphthylene degradation by Rhizobium sp. Strain CU-A1: evidence for naphthalene-1, 8-dicarboxylic acid metabolism. Appl. Environ. Microbiol. 2006, 72:6034-6039.
-
(2006)
Appl. Environ. Microbiol.
, vol.72
, pp. 6034-6039
-
-
Siriwat, P.1
Kobchai, P.2
Sarunya, P.3
Thanyanuch, K.4
Kanchana, J.5
Suthep, T.6
Amorn, P.7
Pairoh, P.8
-
32
-
-
0000612080
-
Phenotypic characterization
-
American Society for Microbiology, Washington, DC, P. Gerhardt, R.G.E. Murray, W.A. Wood, N.R. Krieg (Eds.)
-
Smibert R.M., Krieg N.R. Phenotypic characterization. Methods for General and Molecular Bacteriology 1994, 611-654. American Society for Microbiology, Washington, DC. P. Gerhardt, R.G.E. Murray, W.A. Wood, N.R. Krieg (Eds.).
-
(1994)
Methods for General and Molecular Bacteriology
, pp. 611-654
-
-
Smibert, R.M.1
Krieg, N.R.2
-
33
-
-
0029119519
-
Physical mapping and characterization of a catabolic plasmid from the deep-subsurface bacterium Sphingomonas sp. strain F199
-
Stillwell L.C., Thurston S.J., Schneider R.P., Romine M.F., Fredrickson J.K., Saffer J.D. Physical mapping and characterization of a catabolic plasmid from the deep-subsurface bacterium Sphingomonas sp. strain F199. J. Bacteriol. 1995, 177:4537-4539.
-
(1995)
J. Bacteriol.
, vol.177
, pp. 4537-4539
-
-
Stillwell, L.C.1
Thurston, S.J.2
Schneider, R.P.3
Romine, M.F.4
Fredrickson, J.K.5
Saffer, J.D.6
-
34
-
-
0034802634
-
Convergent and divergent points in catabolic pathways involved in utilization of fluoranthene, naphthalene, anthracene, and phenanthrene by Sphingomonas paucimobilis var. EPA505
-
Story S.P., Parker S.H., Hayasaka S.S., Riley M.B., Kline E.L. Convergent and divergent points in catabolic pathways involved in utilization of fluoranthene, naphthalene, anthracene, and phenanthrene by Sphingomonas paucimobilis var. EPA505. J. Ind. Microbiol. Biotechnol. 2001, 26:369-382.
-
(2001)
J. Ind. Microbiol. Biotechnol.
, vol.26
, pp. 369-382
-
-
Story, S.P.1
Parker, S.H.2
Hayasaka, S.S.3
Riley, M.B.4
Kline, E.L.5
-
35
-
-
34547781750
-
MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0
-
Tamura K., Dudley J., Nei M., Kumar S. MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol. Biol. Evol. 2007, 24:1596-1599.
-
(2007)
Mol. Biol. Evol.
, vol.24
, pp. 1596-1599
-
-
Tamura, K.1
Dudley, J.2
Nei, M.3
Kumar, S.4
-
36
-
-
0041857043
-
-
The Williams and Wilkins Co., Baltimore, MD
-
Williams S.T., Sharpe M.E., Holt J.G. Bergey's Manual of Systematic Bacteriology 1989, vol. 4. The Williams and Wilkins Co., Baltimore, MD. ninth ed.
-
(1989)
Bergey's Manual of Systematic Bacteriology
, vol.4
-
-
Williams, S.T.1
Sharpe, M.E.2
Holt, J.G.3
-
37
-
-
0038653828
-
An encyclopedia of chemicals, drugs, and biologicals
-
Merck and Co. Inc., Rahaway, NJ, M.J. O'Neil, P.E. Hechelman, C.B. Koch, K.J. Roman (Eds.)
-
Windholz M., Budavari S., Blumetti R., Otterbein E. An encyclopedia of chemicals, drugs, and biologicals. The Merck Index 1983, Merck and Co. Inc., Rahaway, NJ. tenth ed. M.J. O'Neil, P.E. Hechelman, C.B. Koch, K.J. Roman (Eds.).
-
(1983)
The Merck Index
-
-
Windholz, M.1
Budavari, S.2
Blumetti, R.3
Otterbein, E.4
-
38
-
-
20444412643
-
Metabolic activation of polycyclic and heterocyclic aromatic hydrocarbons and DNA damage: a review
-
Xue W., Warshawsky D. Metabolic activation of polycyclic and heterocyclic aromatic hydrocarbons and DNA damage: a review. Toxicol. Appl. Pharmacol. 2005, 206:73-93.
-
(2005)
Toxicol. Appl. Pharmacol.
, vol.206
, pp. 73-93
-
-
Xue, W.1
Warshawsky, D.2
|