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Volumn 8, Issue 1, 2013, Pages

Germline Allele-Specific Expression of DAPK1 in Chronic Lymphocytic Leukemia

Author keywords

[No Author keywords available]

Indexed keywords

3' UNTRANSLATED REGION; ALLELE; ARTICLE; CANCER CELL CULTURE; CHRONIC LYMPHATIC LEUKEMIA; CONTROLLED STUDY; DEATH ASSOCIATED PROTEIN KINASE 1 GENE; DISEASE ACTIVITY; DNA METHYLATION; EPIGENETICS; GENE EXPRESSION; GENE IDENTIFICATION; HIGH THROUGHPUT SCREENING; HUMAN; HUMAN CELL; MAJOR CLINICAL STUDY; MATRIX ASSISTED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY; MUTATIONAL ANALYSIS; PROMOTER REGION; PROTEIN EXPRESSION; QUANTITATIVE ANALYSIS; SEQUENCE ANALYSIS; SINGLE NUCLEOTIDE POLYMORPHISM; TUMOR GENE;

EID: 84873821010     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0055261     Document Type: Article
Times cited : (19)

References (36)
  • 3
    • 0033867729 scopus 로고    scopus 로고
    • Familial chronic lymphocytic leukaemia: a survey and review of published studies
    • Yuille MR, Matutes E, Marossy A, Hilditch B, Catovsky D, et al. (2000) Familial chronic lymphocytic leukaemia: a survey and review of published studies. Br J Haematol 109: 794-799.
    • (2000) Br J Haematol , vol.109 , pp. 794-799
    • Yuille, M.R.1    Matutes, E.2    Marossy, A.3    Hilditch, B.4    Catovsky, D.5
  • 4
    • 66049085588 scopus 로고    scopus 로고
    • The molecular basis of familial chronic lymphocytic leukemia
    • Crowther-Swanepoel D, Houlston RS, (2009) The molecular basis of familial chronic lymphocytic leukemia. Haematologica 94: 606-609.
    • (2009) Haematologica , vol.94 , pp. 606-609
    • Crowther-Swanepoel, D.1    Houlston, R.S.2
  • 5
    • 79951498059 scopus 로고    scopus 로고
    • Genome-wide association study identifies a novel susceptibility locus at 6p21.3 among familial CLL
    • Slager SL, Rabe KG, Achenbach SJ, Vachon CM, Goldin LR, et al. (2011) Genome-wide association study identifies a novel susceptibility locus at 6p21.3 among familial CLL. Blood 117: 1911-1916.
    • (2011) Blood , vol.117 , pp. 1911-1916
    • Slager, S.L.1    Rabe, K.G.2    Achenbach, S.J.3    Vachon, C.M.4    Goldin, L.R.5
  • 6
    • 52949139429 scopus 로고    scopus 로고
    • A genome-wide association study identifies six susceptibility loci for chronic lymphocytic leukemia
    • Di Bernardo MC, Crowther-Swanepoel D, Broderick P, Webb E, Sellick G, et al. (2008) A genome-wide association study identifies six susceptibility loci for chronic lymphocytic leukemia. Nat Genet 40: 1204-1210.
    • (2008) Nat Genet , vol.40 , pp. 1204-1210
    • Di Bernardo, M.C.1    Crowther-Swanepoel, D.2    Broderick, P.3    Webb, E.4    Sellick, G.5
  • 7
    • 75749138023 scopus 로고    scopus 로고
    • Common variants at 2q37.3, 8q24.21, 15q21.3 and 16q24.1 influence chronic lymphocytic leukemia risk
    • Crowther-Swanepoel D, Broderick P, Di Bernardo MC, Dobbins SE, Torres M, et al. (2010) Common variants at 2q37.3, 8q24.21, 15q21.3 and 16q24.1 influence chronic lymphocytic leukemia risk. Nat Genet 42: 132-136.
    • (2010) Nat Genet , vol.42 , pp. 132-136
    • Crowther-Swanepoel, D.1    Broderick, P.2    Di Bernardo, M.C.3    Dobbins, S.E.4    Torres, M.5
  • 8
    • 34249314024 scopus 로고    scopus 로고
    • Downregulation of death-associated protein kinase 1 (DAPK1) in chronic lymphocytic leukemia
    • Raval A, Tanner SM, Byrd JC, Angerman EB, Perko JD, et al. (2007) Downregulation of death-associated protein kinase 1 (DAPK1) in chronic lymphocytic leukemia. Cell 129: 879-890.
    • (2007) Cell , vol.129 , pp. 879-890
    • Raval, A.1    Tanner, S.M.2    Byrd, J.C.3    Angerman, E.B.4    Perko, J.D.5
  • 9
    • 33746359639 scopus 로고    scopus 로고
    • The death-associated protein kinases: structure, function, and beyond
    • Bialik S, Kimchi A, (2006) The death-associated protein kinases: structure, function, and beyond. Annu Rev Biochem 75: 189-210.
    • (2006) Annu Rev Biochem , vol.75 , pp. 189-210
    • Bialik, S.1    Kimchi, A.2
  • 12
    • 0012789869 scopus 로고    scopus 로고
    • Allelic variation in gene expression is common in the human genome
    • Lo HS, Wang Z, Hu Y, Yang HH, Gere S, et al. (2003) Allelic variation in gene expression is common in the human genome. Genome Res 13: 1855-1862.
    • (2003) Genome Res , vol.13 , pp. 1855-1862
    • Lo, H.S.1    Wang, Z.2    Hu, Y.3    Yang, H.H.4    Gere, S.5
  • 13
    • 51149099981 scopus 로고    scopus 로고
    • Germline allele-specific expression of TGFBR1 confers an increased risk of colorectal cancer
    • Valle L, Serena-Acedo T, Liyanarachchi S, Hampel H, Comeras I, et al. (2008) Germline allele-specific expression of TGFBR1 confers an increased risk of colorectal cancer. Science 321: 1361-1365.
    • (2008) Science , vol.321 , pp. 1361-1365
    • Valle, L.1    Serena-Acedo, T.2    Liyanarachchi, S.3    Hampel, H.4    Comeras, I.5
  • 14
    • 45149099137 scopus 로고    scopus 로고
    • Allele-specific up-regulation of FGFR2 increases susceptibility to breast cancer
    • Meyer KB, Maia AT, O'Reilly M, Teschendorff AE, Chin SF, et al. (2008) Allele-specific up-regulation of FGFR2 increases susceptibility to breast cancer. PLoS Biol 6: e108.
    • (2008) PLoS Biol , vol.6
    • Meyer, K.B.1    Maia, A.T.2    O'Reilly, M.3    Teschendorff, A.E.4    Chin, S.F.5
  • 15
    • 34547727263 scopus 로고    scopus 로고
    • Human microRNA-155 on chromosome 21 differentially interacts with its polymorphic target in the AGTR1 3′ untranslated region: a mechanism for functional single-nucleotide polymorphisms related to phenotypes
    • Sethupathy P, Borel C, Gagnebin M, Grant GR, Deutsch S, et al. (2007) Human microRNA-155 on chromosome 21 differentially interacts with its polymorphic target in the AGTR1 3′ untranslated region: a mechanism for functional single-nucleotide polymorphisms related to phenotypes. Am J Hum Genet 81: 405-413.
    • (2007) Am J Hum Genet , vol.81 , pp. 405-413
    • Sethupathy, P.1    Borel, C.2    Gagnebin, M.3    Grant, G.R.4    Deutsch, S.5
  • 16
    • 62749154560 scopus 로고    scopus 로고
    • Differential allelic expression of dopamine D1 receptor gene (DRD1) is modulated by microRNA miR-504
    • Huang W, Li MD, (2009) Differential allelic expression of dopamine D1 receptor gene (DRD1) is modulated by microRNA miR-504. Biol Psychiatry 65: 702-705.
    • (2009) Biol Psychiatry , vol.65 , pp. 702-705
    • Huang, W.1    Li, M.D.2
  • 17
    • 84863082525 scopus 로고    scopus 로고
    • Monoallelic expression determines oncogenic progression and outcome in benign and malignant brain tumors
    • Walker EJ, Zhang C, Castelo-Branco P, Hawkins C, Wilson W, et al. (2012) Monoallelic expression determines oncogenic progression and outcome in benign and malignant brain tumors. Cancer Res 72: 636-644.
    • (2012) Cancer Res , vol.72 , pp. 636-644
    • Walker, E.J.1    Zhang, C.2    Castelo-Branco, P.3    Hawkins, C.4    Wilson, W.5
  • 19
    • 58349092614 scopus 로고    scopus 로고
    • Allele-specific gene expression is widespread across the genome and biological processes
    • Palacios R, Gazave E, Goni J, Piedrafita G, Fernando O, et al. (2009) Allele-specific gene expression is widespread across the genome and biological processes. PLoS ONE 4: e4150.
    • (2009) PLoS ONE , vol.4
    • Palacios, R.1    Gazave, E.2    Goni, J.3    Piedrafita, G.4    Fernando, O.5
  • 20
    • 29744470898 scopus 로고    scopus 로고
    • Germline epimutation: A basis for epigenetic disease in humans
    • Martin DI, Ward R, Suter CM, (2005) Germline epimutation: A basis for epigenetic disease in humans. Ann N Y Acad Sci 1054: 68-77.
    • (2005) Ann N Y Acad Sci , vol.1054 , pp. 68-77
    • Martin, D.I.1    Ward, R.2    Suter, C.M.3
  • 21
    • 34247645078 scopus 로고    scopus 로고
    • Heritable germline epimutations in humans
    • Horsthemke B, (2007) Heritable germline epimutations in humans. Nat Genet 39: 573-574 author reply 575-576.
    • (2007) Nat Genet , vol.39 , pp. 573-574
    • Horsthemke, B.1
  • 23
    • 33749122904 scopus 로고    scopus 로고
    • Heritable germline epimutation of MSH2 in a family with hereditary nonpolyposis colorectal cancer
    • Chan TL, Yuen ST, Kong CK, Chan YW, Chan AS, et al. (2006) Heritable germline epimutation of MSH2 in a family with hereditary nonpolyposis colorectal cancer. Nat Genet 38: 1178-1183.
    • (2006) Nat Genet , vol.38 , pp. 1178-1183
    • Chan, T.L.1    Yuen, S.T.2    Kong, C.K.3    Chan, Y.W.4    Chan, A.S.5
  • 24
    • 44849114690 scopus 로고    scopus 로고
    • BRCA1 promoter methylation in peripheral blood DNA of mutation negative familial breast cancer patients with a BRCA1 tumour phenotype
    • Snell C, Krypuy M, Wong EM, Loughrey MB, Dobrovic A, (2008) BRCA1 promoter methylation in peripheral blood DNA of mutation negative familial breast cancer patients with a BRCA1 tumour phenotype. Breast Cancer Res 10: R12.
    • (2008) Breast Cancer Res , vol.10
    • Snell, C.1    Krypuy, M.2    Wong, E.M.3    Loughrey, M.B.4    Dobrovic, A.5
  • 25
    • 77951850381 scopus 로고    scopus 로고
    • BISMA-fast and accurate bisulfite sequencing data analysis of individual clones from unique and repetitive sequences
    • Rohde C, Zhang Y, Reinhardt R, Jeltsch A BISMA-fast and accurate bisulfite sequencing data analysis of individual clones from unique and repetitive sequences. BMC Bioinformatics 11: 230.
    • BMC Bioinformatics , vol.11 , pp. 230
    • Rohde, C.1    Zhang, Y.2    Reinhardt, R.3    Jeltsch, A.4
  • 26
    • 27744577751 scopus 로고    scopus 로고
    • BiQ Analyzer: visualization and quality control for DNA methylation data from bisulfite sequencing
    • Bock C, Reither S, Mikeska T, Paulsen M, Walter J, et al. (2005) BiQ Analyzer: visualization and quality control for DNA methylation data from bisulfite sequencing. Bioinformatics 21: 4067-4068.
    • (2005) Bioinformatics , vol.21 , pp. 4067-4068
    • Bock, C.1    Reither, S.2    Mikeska, T.3    Paulsen, M.4    Walter, J.5
  • 27
    • 27644548948 scopus 로고    scopus 로고
    • Quantitative high-throughput analysis of DNA methylation patterns by base-specific cleavage and mass spectrometry
    • Ehrich M, Nelson MR, Stanssens P, Zabeau M, Liloglou T, et al. (2005) Quantitative high-throughput analysis of DNA methylation patterns by base-specific cleavage and mass spectrometry. Proc Natl Acad Sci U S A 102: 15785-15790.
    • (2005) Proc Natl Acad Sci U S A , vol.102 , pp. 15785-15790
    • Ehrich, M.1    Nelson, M.R.2    Stanssens, P.3    Zabeau, M.4    Liloglou, T.5
  • 29
    • 5344244656 scopus 로고    scopus 로고
    • R Development Core Team, Vienna, Austria: R Foundation for Statistical Computing
    • R Development Core Team (2008) R: A language and environment for statistical computing. Vienna, Austria: R Foundation for Statistical Computing.
    • (2008) R: A language and environment for statistical computing
  • 30
    • 84945952294 scopus 로고
    • The identification of multiple outliers
    • Davies P, Gather U, (1993) The identification of multiple outliers. J Amer Stat Assoc 88: 782-801.
    • (1993) J Amer Stat Assoc , vol.88 , pp. 782-801
    • Davies, P.1    Gather, U.2
  • 31
    • 0036334007 scopus 로고    scopus 로고
    • Small changes in expression affect predisposition to tumorigenesis
    • Yan H, Dobbie Z, Gruber SB, Markowitz S, Romans K, et al. (2002) Small changes in expression affect predisposition to tumorigenesis. Nat Genet 30: 25-26.
    • (2002) Nat Genet , vol.30 , pp. 25-26
    • Yan, H.1    Dobbie, Z.2    Gruber, S.B.3    Markowitz, S.4    Romans, K.5
  • 32
    • 67449152486 scopus 로고    scopus 로고
    • Infrequent detection of germline allele-specific expression of TGFBR1 in lymphoblasts and tissues of colon cancer patients
    • Guda K, Natale L, Lutterbaugh J, Wiesner GL, Lewis S, et al. (2009) Infrequent detection of germline allele-specific expression of TGFBR1 in lymphoblasts and tissues of colon cancer patients. Cancer Res 69: 4959-4961.
    • (2009) Cancer Res , vol.69 , pp. 4959-4961
    • Guda, K.1    Natale, L.2    Lutterbaugh, J.3    Wiesner, G.L.4    Lewis, S.5
  • 34
    • 60549113518 scopus 로고    scopus 로고
    • B-cell clones as early markers for chronic lymphocytic leukemia
    • Landgren O, Albitar M, Ma W, Abbasi F, Hayes RB, et al. (2009) B-cell clones as early markers for chronic lymphocytic leukemia. N Engl J Med 360: 659-667.
    • (2009) N Engl J Med , vol.360 , pp. 659-667
    • Landgren, O.1    Albitar, M.2    Ma, W.3    Abbasi, F.4    Hayes, R.B.5
  • 35
  • 36
    • 58149144567 scopus 로고    scopus 로고
    • Heritable somatic methylation and inactivation of MSH2 in families with Lynch syndrome due to deletion of the 3′ exons of TACSTD1
    • Ligtenberg MJ, Kuiper RP, Chan TL, Goossens M, Hebeda KM, et al. (2009) Heritable somatic methylation and inactivation of MSH2 in families with Lynch syndrome due to deletion of the 3′ exons of TACSTD1. Nat Genet 41: 112-117.
    • (2009) Nat Genet , vol.41 , pp. 112-117
    • Ligtenberg, M.J.1    Kuiper, R.P.2    Chan, T.L.3    Goossens, M.4    Hebeda, K.M.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.