-
1
-
-
77957955129
-
Profiling the cancer genome
-
Cowin PA, Anglesio M, Etemadmoghadam D, Bowtell DD, (2010) Profiling the cancer genome. Annu Rev Genomics Hum Genet 11: 133-159.
-
(2010)
Annu Rev Genomics Hum Genet
, vol.11
, pp. 133-159
-
-
Cowin, P.A.1
Anglesio, M.2
Etemadmoghadam, D.3
Bowtell, D.D.4
-
2
-
-
20044375763
-
Array comparative genomic hybridization and its applications in cancer
-
Pinkel D, Albertson DG, (2005) Array comparative genomic hybridization and its applications in cancer. Nat Genet 37Suppl: S11-S17.
-
(2005)
Nat Genet
, vol.37
-
-
Pinkel, D.1
Albertson, D.G.2
-
3
-
-
84859218110
-
Comparative analysis of algorithms for integration of copy number and expression data
-
Louhimo R, Lepikhova T, Monni O, Hautaniemi S, (2012) Comparative analysis of algorithms for integration of copy number and expression data. Nat Methods 9: 351-355.
-
(2012)
Nat Methods
, vol.9
, pp. 351-355
-
-
Louhimo, R.1
Lepikhova, T.2
Monni, O.3
Hautaniemi, S.4
-
4
-
-
3543105225
-
Circular binary segmentation for the analysis of array-based DNA copy number data
-
Olshen AB, Venkatraman ES, Lucito R, Wigler M, (2004) Circular binary segmentation for the analysis of array-based DNA copy number data. Biostatistics 5: 557-572.
-
(2004)
Biostatistics
, vol.5
, pp. 557-572
-
-
Olshen, A.B.1
Venkatraman, E.S.2
Lucito, R.3
Wigler, M.4
-
5
-
-
38049100456
-
Assessing the significance of chromosomal aberrations in cancer: methodology and application to glioma
-
Beroukhim R, Getz G, Nghiemphu L, Barretina J, Hsueh T, et al. (2007) Assessing the significance of chromosomal aberrations in cancer: methodology and application to glioma. Proc Natl Acad Sci U S A 104: 20007-20012.
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, pp. 20007-20012
-
-
Beroukhim, R.1
Getz, G.2
Nghiemphu, L.3
Barretina, J.4
Hsueh, T.5
-
6
-
-
84856796700
-
DEAD box 1 (DDX1) expression predicts for local control and overall survival in early stage, node-negative breast cancer
-
Taunk NK, Goyal S, Wu H, Moran MS, Chen S, et al. (2012) DEAD box 1 (DDX1) expression predicts for local control and overall survival in early stage, node-negative breast cancer. Cancer 118: 888-898.
-
(2012)
Cancer
, vol.118
, pp. 888-898
-
-
Taunk, N.K.1
Goyal, S.2
Wu, H.3
Moran, M.S.4
Chen, S.5
-
7
-
-
67650080623
-
Essential role for eIF4GI overexpression in the pathogenesis of inflammatory breast cancer
-
Silvera D, Arju R, Darvishian F, Levine PH, Zolfaghari L, et al. (2009) Essential role for eIF4GI overexpression in the pathogenesis of inflammatory breast cancer. Nat Cell Biol 11: 903-908.
-
(2009)
Nat Cell Biol
, vol.11
, pp. 903-908
-
-
Silvera, D.1
Arju, R.2
Darvishian, F.3
Levine, P.H.4
Zolfaghari, L.5
-
8
-
-
0032940198
-
Functional domains of c-myc promoter binding protein 1 involved in transcriptional repression and cell growth regulation
-
Ghosh AK, Steele R, Ray RB, (1999) Functional domains of c-myc promoter binding protein 1 involved in transcriptional repression and cell growth regulation. Mol Cell Biol 19: 2880-2886.
-
(1999)
Mol Cell Biol
, vol.19
, pp. 2880-2886
-
-
Ghosh, A.K.1
Steele, R.2
Ray, R.B.3
-
9
-
-
0030851904
-
A human homolog of the yeast Ssk2/Ssk22 MAP kinase kinase kinases, MTK1, mediates stress-induced activation of the p38 and JNK pathways
-
Takekawa M, Posas F, Saito H, (1997) A human homolog of the yeast Ssk2/Ssk22 MAP kinase kinase kinases, MTK1, mediates stress-induced activation of the p38 and JNK pathways. EMBO J 16: 4973-4982.
-
(1997)
EMBO J
, vol.16
, pp. 4973-4982
-
-
Takekawa, M.1
Posas, F.2
Saito, H.3
-
10
-
-
36749066161
-
ANCCA, an estrogen-regulated AAA+ ATPase coactivator for ERalpha, is required for coregulator occupancy and chromatin modification
-
Zou JX, Revenko AS, Li LB, Gemo AT, Chen HW, (2007) ANCCA, an estrogen-regulated AAA+ ATPase coactivator for ERalpha, is required for coregulator occupancy and chromatin modification. Proc Natl Acad Sci U S A 104: 18067-18072.
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, pp. 18067-18072
-
-
Zou, J.X.1
Revenko, A.S.2
Li, L.B.3
Gemo, A.T.4
Chen, H.W.5
-
11
-
-
33746840673
-
Contribution of the BOP1 gene, located on 8q24, to colorectal tumorigenesis
-
Killian A, Sarafan-Vasseur N, Sesboue R, Le PF, Blanchard F, et al. (2006) Contribution of the BOP1 gene, located on 8q24, to colorectal tumorigenesis. Genes Chromosomes Cancer 45: 874-881.
-
(2006)
Genes Chromosomes Cancer
, vol.45
, pp. 874-881
-
-
Killian, A.1
Sarafan-Vasseur, N.2
Sesboue, R.3
Le, P.F.4
Blanchard, F.5
-
12
-
-
79961145353
-
Regulation of the MDM2-P53 pathway and tumor growth by PICT1 via nucleolar RPL11
-
Sasaki M, Kawahara K, Nishio M, Mimori K, Kogo R, et al. (2011) Regulation of the MDM2-P53 pathway and tumor growth by PICT1 via nucleolar RPL11. Nat Med 17: 944-951.
-
(2011)
Nat Med
, vol.17
, pp. 944-951
-
-
Sasaki, M.1
Kawahara, K.2
Nishio, M.3
Mimori, K.4
Kogo, R.5
-
13
-
-
80052575003
-
Integrative analysis of array-comparative genomic hybridisation and matched gene expression profiling data reveals novel genes with prognostic significance in oesophageal adenocarcinoma
-
Goh XY, Rees JR, Paterson AL, Chin SF, Marioni JC, et al. (2011) Integrative analysis of array-comparative genomic hybridisation and matched gene expression profiling data reveals novel genes with prognostic significance in oesophageal adenocarcinoma. Gut 60: 1317-1326.
-
(2011)
Gut
, vol.60
, pp. 1317-1326
-
-
Goh, X.Y.1
Rees, J.R.2
Paterson, A.L.3
Chin, S.F.4
Marioni, J.C.5
-
14
-
-
0034655991
-
BASC, a super complex of BRCA1-associated proteins involved in the recognition and repair of aberrant DNA structures
-
Wang Y, Cortez D, Yazdi P, Neff N, Elledge SJ, et al. (2000) BASC, a super complex of BRCA1-associated proteins involved in the recognition and repair of aberrant DNA structures. Genes Dev 14: 927-939.
-
(2000)
Genes Dev
, vol.14
, pp. 927-939
-
-
Wang, Y.1
Cortez, D.2
Yazdi, P.3
Neff, N.4
Elledge, S.J.5
-
15
-
-
79952606011
-
CNAmet: an R package for integrating copy number, methylation and expression data
-
Louhimo R, Hautaniemi S, (2011) CNAmet: an R package for integrating copy number, methylation and expression data. Bioinformatics 27: 887-888.
-
(2011)
Bioinformatics
, vol.27
, pp. 887-888
-
-
Louhimo, R.1
Hautaniemi, S.2
-
16
-
-
28444493739
-
Combining probability from independent tests: the weighted Z-method is superior to Fisher's approach
-
Whitlock MC, (2005) Combining probability from independent tests: the weighted Z-method is superior to Fisher's approach. J Evol Biol 18: 1368-1373.
-
(2005)
J Evol Biol
, vol.18
, pp. 1368-1373
-
-
Whitlock, M.C.1
-
17
-
-
26444453688
-
Bladder cancer stage and outcome by array-based comparative genomic hybridization
-
Blaveri E, Brewer JL, Roydasgupta R, Fridlyand J, DeVries S, et al. (2005) Bladder cancer stage and outcome by array-based comparative genomic hybridization. Clin Cancer Res 11: 7012-7022.
-
(2005)
Clin Cancer Res
, vol.11
, pp. 7012-7022
-
-
Blaveri, E.1
Brewer, J.L.2
Roydasgupta, R.3
Fridlyand, J.4
DeVries, S.5
-
18
-
-
0033931867
-
Assessing the accuracy of prediction algorithms for classification: an overview
-
Baldi P, Brunak S, Chauvin Y, Andersen CA, Nielsen H, (2000) Assessing the accuracy of prediction algorithms for classification: an overview. Bioinformatics 16: 412-424.
-
(2000)
Bioinformatics
, vol.16
, pp. 412-424
-
-
Baldi, P.1
Brunak, S.2
Chauvin, Y.3
Andersen, C.A.4
Nielsen, H.5
-
19
-
-
58149112821
-
Functional copy-number alterations in cancer
-
Taylor BS, Barretina J, Socci ND, Decarolis P, Ladanyi M, et al. (2008) Functional copy-number alterations in cancer. PLoS One 3: e3179.
-
(2008)
PLoS One
, vol.3
-
-
Taylor, B.S.1
Barretina, J.2
Socci, N.D.3
Decarolis, P.4
Ladanyi, M.5
-
20
-
-
84856535081
-
Mutual exclusivity analysis identifies oncogenic network modules
-
Ciriello G, Cerami E, Sander C, Schultz N, (2012) Mutual exclusivity analysis identifies oncogenic network modules. Genome Res 22: 398-406.
-
(2012)
Genome Res
, vol.22
, pp. 398-406
-
-
Ciriello, G.1
Cerami, E.2
Sander, C.3
Schultz, N.4
-
21
-
-
54549108740
-
Comprehensive genomic characterization defines human glioblastoma genes and core pathways
-
The Cancer Genome Atlas Research Network
-
The Cancer Genome Atlas Research Network, (2008) Comprehensive genomic characterization defines human glioblastoma genes and core pathways. Nature 455: 1061-1068.
-
(2008)
Nature
, vol.455
, pp. 1061-1068
-
-
-
22
-
-
79959838081
-
Integrated genomic analyses of ovarian carcinoma
-
Integrated genomic analyses of ovarian carcinoma. Nature 474: 609-615.
-
Nature
, vol.474
, pp. 609-615
-
-
-
23
-
-
1542515338
-
A census of human cancer genes
-
Futreal PA, Coin L, Marshall M, Down T, Hubbard T, et al. (2004) A census of human cancer genes. Nat Rev Cancer 4: 177-183.
-
(2004)
Nat Rev Cancer
, vol.4
, pp. 177-183
-
-
Futreal, P.A.1
Coin, L.2
Marshall, M.3
Down, T.4
Hubbard, T.5
-
24
-
-
79955934629
-
Gitools: analysis and visualisation of genomic data using interactive heat-maps
-
Perez-Llamas C, Lopez-Bigas N, (2011) Gitools: analysis and visualisation of genomic data using interactive heat-maps. PLoS One 6: e19541.
-
(2011)
PLoS One
, vol.6
-
-
Perez-Llamas, C.1
Lopez-Bigas, N.2
|