Expression profile of altered long non-coding RNAs in patients with HBV-associated hepatocellular carcinoma

Journal of Huazhong University of Science and Technology - Medical Science

Volumn 33, Issue 1, 2013, Pages 96-101

  Pan, Yan Feng ^a   Qin, Tao ^b   Feng, Lei ^a   Yu, Zu Jiang ^a  

^a THE FIRST AFFILIATED HOSPITAL OF ZHENGZHOU UNIVERSITY   (China)

^b ZHENGZHOU UNIVERSITY   (China)

Author keywords

gene expression; hepatitis B virus; hepatocellular carcinoma; long non coding RNA

Indexed keywords

LONG UNTRANSLATED RNA;

ARTICLE; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENETICS; HEPATITIS B; HUMAN; LIVER CELL CARCINOMA; LIVER TUMOR; MUTATION;

CARCINOMA, HEPATOCELLULAR; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, NEOPLASTIC; HEPATITIS B; HUMANS; LIVER NEOPLASMS; MUTATION; RNA, LONG NONCODING;

EID: 84873645668     PISSN: 16720733     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11596-013-1078-y     Document Type: Article

References (24)

1. Maluccio M, Covey A. Recent progress in understanding, diagnosing, and treating hepatocellular carcinoma. CA Cancer J Clin, 2012,62(6):394-399
2. Whittaker S, Marais R, Zhu AX. The role of signaling pathways in the development and treatment of hepatocellular carcinoma. Oncogene, 2010,29(36):4989-5005
3. Farazi PA, DePinho RA. Hepatocellular carcinoma pathogenesis: from genes to environment. Nat Rev Cancer, 2006,6(9):674-687
4. Brosnan CA, Voinnet O. The long and the short of noncoding RNAs. Curr Opin Cell Biol, 2009,21(3):416-425
5. Mattick JS, Makunin IV. Non-coding RNA. Hum Mol Genet, 2006,15(Spec 1):R17-29
6. Chen LL, Carmichael GG. Decoding the function of nuclear long non-coding RNAs. Curr Opin Cell Biol, 2010,22(3):357-364
7. Ponting CP, Oliver PL, Reik W. Evolution and functions of long noncoding RNAs. Cell, 2009,136(4):629-641
8. Huarte M, Rinn JL. Large non-coding RNAs: missing links in cancer. Hum Mol Genet, 2010,19 (R2):R152-161
9. Jia H, Osak M, Bogu GK, et al. Genome-wide computational identification and manual annotation of human long noncoding RNA genes. RNA, 2010,16(8):1478-1487
10. Tafer H, Hofacker IL. RNAplex: a fast tool for RNA-RNA interaction search. Bioinformatics, 2008,24(22):2657-2663
11. Panzitt K, Tschernatsch MM, Guelly C, et al. Characterization of HULC, a novel gene with striking up-regulation in hepatocellular carcinoma, as noncoding RNA. Gastroenterology, 2007,132(1):330-342
12. Ozkan H, Erdal H, Kocak E, et al. Diagnostic and prognostic role of serum glypican 3 in patients with hepatocellular carcinoma. J Clin Lab Anal, 2011,25(5):350-353
13. Ho M, Kim H. Glypican-3: a new target for cancer immunotherapy. Eur J Cancer, 2011,47(3):333-338
14. Naso MF, Liang B, Huang CC, et al. Dermokine: an extensively differentially spliced gene expressed in epithelial cells. J Invest Dermatol, 2007,127(7):1622-1631
15. Lee EJ, Jo M, Rho SB, et al. Dkk3, downregulated in cervical cancer, functions as a negative regulator of beta-catenin. Int J Cancer, 2009,124(2):287-297
16. Yang ZR, Dong WG, Lei XF, et al. Overexpression of Dickkopf-3 induces apoptosis through mitochondrial pathway in human colon cancer. World J Gastroenterol, 2012,18(14):1590-1601
17. Chen CH, Chuang SM, Yang MF, et al. A novel function of YWHAZ/beta-catenin axis in promoting epithelial-mesenchymal transition and lung cancer metastasis. Mol Cancer Res, 2012,10(10):1319-1331
18. Saad S, Stanners SR, Yong R, et al. Notch mediated epithelial to mesenchymal transformation is associated with increased expression of the Snail transcription factor. Int J Biochem Cell Biol, 2010,42(7):1115-1122
19. Chuaysri C, Thuwajit P, Paupairoj A, et al. Alpha-smooth muscle actin-positive fibroblasts promote biliary cell proliferation and correlate with poor survival in cholangiocarcinoma. Oncol Rep, 2009,21(4):957-969
20. Lee JT. Lessons from X-chromosome inactivation: long ncRNA as guides and tethers to the epigenome. Genes Dev, 2009,23(16):1831-1842
21. Mercer TR, Dinger ME, Mattick JS. Long non-coding RNAs: insights into functions. Nat Rev Genet, 2009,10(3):155-159
22. Gibb EA, Brown CJ, Lam WL. The functional role of long non-coding RNA in human carcinomas. Mol Cancer, 2011,10:38
23. Lai JP, Oseini AM, Moser CD, et al. The oncogenic effect of sulfatase 2 in human hepatocellular carcinoma is mediated in part by glypican 3-dependent Wnt activation. Hepatology, 2010,52(5):1680-1689
24. Khalil AM, Guttman M, Huarte M, et al. Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression. Proc Natl Acad Sci USA, 2009,106(28):11 667-11 672