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Volumn 59, Issue , 2013, Pages 49-57

Phylogeny of bacterial methylotrophy genes reveals robustness in Methylobacterium mxaF sequences and mxa operon construction

Author keywords

Methylobacterium; Methylotrophy; MxaF; Phylogenetic analysis; PPFM

Indexed keywords

METHYLOBACTERIUM; METHYLOTROPHY; MXAF; PHYLOGENETIC ANALYSIS; PPFM;

EID: 84873289221     PISSN: 00380717     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.soilbio.2012.12.010     Document Type: Article
Times cited : (6)

References (35)
  • 3
    • 0031833103 scopus 로고    scopus 로고
    • The structure and function of the PQQ-containing quinoprotein dehydrogenases
    • Anthony C., Ghosh M. The structure and function of the PQQ-containing quinoprotein dehydrogenases. Progress in Biophysics and Molecular Biology 1998, 69:1-21.
    • (1998) Progress in Biophysics and Molecular Biology , vol.69 , pp. 1-21
    • Anthony, C.1    Ghosh, M.2
  • 4
    • 0028584412 scopus 로고
    • The structure and function of methanol dehydrogenase and related quinoproteins containing pyrollo-quinoline quinone
    • Anthony C., Ghosh M., Blake C.C.F. The structure and function of methanol dehydrogenase and related quinoproteins containing pyrollo-quinoline quinone. Biochemistry 1994, 304:665-674.
    • (1994) Biochemistry , vol.304 , pp. 665-674
    • Anthony, C.1    Ghosh, M.2    Blake, C.C.F.3
  • 5
    • 78249274906 scopus 로고    scopus 로고
    • A thermophilic bacterial origin and subsequent constraints by redox, light and salinity on the evolution of the microbial mercuric reductase
    • Barkay T., Kritee K., Boyd E., Geesey G. A thermophilic bacterial origin and subsequent constraints by redox, light and salinity on the evolution of the microbial mercuric reductase. Environmental Microbiology 2010, 12:2904-2917.
    • (2010) Environmental Microbiology , vol.12 , pp. 2904-2917
    • Barkay, T.1    Kritee, K.2    Boyd, E.3    Geesey, G.4
  • 7
    • 84875849289 scopus 로고    scopus 로고
    • The mercury resistance operon: from an origin in a geothermal environment to an efficient detoxification machine
    • Boyd E.S., Barkay B. The mercury resistance operon: from an origin in a geothermal environment to an efficient detoxification machine. Frontiers in Microbiology 2012, 3:1-13.
    • (2012) Frontiers in Microbiology , vol.3 , pp. 1-13
    • Boyd, E.S.1    Barkay, B.2
  • 9
    • 0037967152 scopus 로고    scopus 로고
    • Methylotrophy in Methylobacterium extorquens AM1 from a genomic point of view
    • Chistoserdova L., Chen S.W., Lapidus A., Lidstrom M.E. Methylotrophy in Methylobacterium extorquens AM1 from a genomic point of view. Journal of Bacteriology 2003, 185:2980-2987.
    • (2003) Journal of Bacteriology , vol.185 , pp. 2980-2987
    • Chistoserdova, L.1    Chen, S.W.2    Lapidus, A.3    Lidstrom, M.E.4
  • 10
    • 0034622429 scopus 로고    scopus 로고
    • 2, in the oxidation of β-d-glucose by soluble, quinoprotein glucose dehydrogenase
    • 2, in the oxidation of β-d-glucose by soluble, quinoprotein glucose dehydrogenase. Biochemistry 2000, 39:9384-9392.
    • (2000) Biochemistry , vol.39 , pp. 9384-9392
    • Dewanti, A.R.1    Duine, J.A.2
  • 13
    • 0026585263 scopus 로고
    • How close is close: 16S rRNA sequence identity may not be sufficient to guarantee species identity
    • Fox G.E., Wisotzkey J.D., Jurtshuk P. How close is close: 16S rRNA sequence identity may not be sufficient to guarantee species identity. International Journal of Systematic Bacteriology 1992, 42:166-170.
    • (1992) International Journal of Systematic Bacteriology , vol.42 , pp. 166-170
    • Fox, G.E.1    Wisotzkey, J.D.2    Jurtshuk, P.3
  • 14
    • 0036847978 scopus 로고    scopus 로고
    • The production of methanol by flowering plants and the global methanol cycle
    • Galbally I.E., Kirstine W. The production of methanol by flowering plants and the global methanol cycle. Journal of Atmospheric Chemistry 2002, 43:195-229.
    • (2002) Journal of Atmospheric Chemistry , vol.43 , pp. 195-229
    • Galbally, I.E.1    Kirstine, W.2
  • 15
    • 22144486947 scopus 로고    scopus 로고
    • Fuzzy species among recombinogenic bacteria
    • Hanage W.P., Fraser C., Spratt B.G. Fuzzy species among recombinogenic bacteria. BMC Biology 2005, 3:6.
    • (2005) BMC Biology , vol.3 , pp. 6
    • Hanage, W.P.1    Fraser, C.2    Spratt, B.G.3
  • 16
    • 0035408072 scopus 로고    scopus 로고
    • Aerobic methylobacteria are capable of synthesizing auxins
    • Ivanova E.G., Dornonina N.V., Trotsenko Y.A. Aerobic methylobacteria are capable of synthesizing auxins. Microbiology 2001, 70:392-397.
    • (2001) Microbiology , vol.70 , pp. 392-397
    • Ivanova, E.G.1    Dornonina, N.V.2    Trotsenko, Y.A.3
  • 19
    • 77952672792 scopus 로고    scopus 로고
    • Site and plant species are important determinants of the Methylobacterium community composition in the plant phyllosphere
    • Knief C., Ramette A., Frances L., Alonso-Blanco C., Vorholt J.A. Site and plant species are important determinants of the Methylobacterium community composition in the plant phyllosphere. ISME Journal 2010, 4:719-728.
    • (2010) ISME Journal , vol.4 , pp. 719-728
    • Knief, C.1    Ramette, A.2    Frances, L.3    Alonso-Blanco, C.4    Vorholt, J.A.5
  • 21
    • 0036209216 scopus 로고    scopus 로고
    • Plants in the pink: cytokinin production by Methylobacterium
    • Lidstrom M.E., Chistoserdova L. Plants in the pink: cytokinin production by Methylobacterium. Journal of Bacteriology 2002, 184:1818.
    • (2002) Journal of Bacteriology , vol.184 , pp. 1818
    • Lidstrom, M.E.1    Chistoserdova, L.2
  • 23
    • 21144434130 scopus 로고    scopus 로고
    • Pink-pigmented facultative methylotrophic bacteria accelerate germination, growth, and yield of sugarcane clone Co86032 (Saccharum officinarum L.)
    • Madhaiyan M., Poonguzhali S., Lee H.S., Hari K., Sundaram S.P., Sa T.M. Pink-pigmented facultative methylotrophic bacteria accelerate germination, growth, and yield of sugarcane clone Co86032 (Saccharum officinarum L.). Biology and Fertility of Soils 2005, 41:350-358.
    • (2005) Biology and Fertility of Soils , vol.41 , pp. 350-358
    • Madhaiyan, M.1    Poonguzhali, S.2    Lee, H.S.3    Hari, K.4    Sundaram, S.P.5    Sa, T.M.6
  • 26
    • 0030872092 scopus 로고    scopus 로고
    • The methanol dehydrogenase structural gene mxaF and its use as a functional gene probe for methanotrophs and methylotrophs
    • McDonald I.R., Murrell J.C. The methanol dehydrogenase structural gene mxaF and its use as a functional gene probe for methanotrophs and methylotrophs. Applied and Environmental Microbiology 1997, 63:3218-3224.
    • (1997) Applied and Environmental Microbiology , vol.63 , pp. 3218-3224
    • McDonald, I.R.1    Murrell, J.C.2
  • 28
    • 0025955723 scopus 로고
    • 16S rRNA sequences of Bartonella bacilliformis and cat scratch disease bacillus reveal phylogenetic relationships with the alpha-2 subgroup of the class proteobacteria
    • O'Conner S.P., Dorsch M., Steigerwalt A.G., Brenner D.J., Stackebrandt E. 16S rRNA sequences of Bartonella bacilliformis and cat scratch disease bacillus reveal phylogenetic relationships with the alpha-2 subgroup of the class proteobacteria. Journal of Clinical Microbiology 1991, 29:2144-2150.
    • (1991) Journal of Clinical Microbiology , vol.29 , pp. 2144-2150
    • O'Conner, S.P.1    Dorsch, M.2    Steigerwalt, A.G.3    Brenner, D.J.4    Stackebrandt, E.5
  • 29
    • 1542331437 scopus 로고    scopus 로고
    • Plant colonization by pink-pigmented facultative methylotrophic bacteria (PPFMs)
    • Omer Z.S., Tombolini R., Gerhardson B. Plant colonization by pink-pigmented facultative methylotrophic bacteria (PPFMs). FEMS Microbiology Ecology 2004, 47:319-326.
    • (2004) FEMS Microbiology Ecology , vol.47 , pp. 319-326
    • Omer, Z.S.1    Tombolini, R.2    Gerhardson, B.3
  • 30
    • 77955362394 scopus 로고    scopus 로고
    • Functional investigation of methanol dehydrogenase-like protein XoxF in Methylobacterium extorquens AM1
    • Schmidt S., Christen P., Kiefer P., Vorholt J.A. Functional investigation of methanol dehydrogenase-like protein XoxF in Methylobacterium extorquens AM1. Microbiology 2010, 156:2575-2586.
    • (2010) Microbiology , vol.156 , pp. 2575-2586
    • Schmidt, S.1    Christen, P.2    Kiefer, P.3    Vorholt, J.A.4
  • 31
    • 80055054718 scopus 로고    scopus 로고
    • XoxF is required for expression of methanol dehydrogenase in Methylobacterium extorquens AM1
    • Skovran E., Palmer A.D., Rountree A.M., Good N.M., Lidstrom M.E. xoxF is required for expression of methanol dehydrogenase in Methylobacterium extorquens AM1. Journal of Bacteriology 2011, 193:6032-6038.
    • (2011) Journal of Bacteriology , vol.193 , pp. 6032-6038
    • Skovran, E.1    Palmer, A.D.2    Rountree, A.M.3    Good, N.M.4    Lidstrom, M.E.5
  • 34
    • 4344690052 scopus 로고    scopus 로고
    • Methylobacterium populi sp. nov., a novel aerobic, pink-pigmented, facultatively methylotrophic, methane-utilizing bacterium isolated from poplar trees (Populus deltoids × nigra DN34)
    • Van Aken B., Peres C.M., Doty S.L., Yoon J.M., Schnoor J. Methylobacterium populi sp. nov., a novel aerobic, pink-pigmented, facultatively methylotrophic, methane-utilizing bacterium isolated from poplar trees (Populus deltoids × nigra DN34). International Journal of Systematic and Evolutionary Bacteriology 2004, 54:1191-1196.
    • (2004) International Journal of Systematic and Evolutionary Bacteriology , vol.54 , pp. 1191-1196
    • Van Aken, B.1    Peres, C.M.2    Doty, S.L.3    Yoon, J.M.4    Schnoor, J.5
  • 35
    • 0027724833 scopus 로고
    • The active site structure of calcium-containing quinoprotein methanol dehydrogenase
    • White S., Boyd G., Matthews F.S., Xia Z., Dai W., Zhang Y., Davidson V.L. The active site structure of calcium-containing quinoprotein methanol dehydrogenase. Biochemistry 1993, 32:12955-12958.
    • (1993) Biochemistry , vol.32 , pp. 12955-12958
    • White, S.1    Boyd, G.2    Matthews, F.S.3    Xia, Z.4    Dai, W.5    Zhang, Y.6    Davidson, V.L.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.