메뉴 건너뛰기




Volumn 15, Issue 1, 2013, Pages 198-219

Compensated transfer entropy as a tool for reliably estimating information transfer in physiological time series

Author keywords

Cardiovascular variability; Conditional entropy; Instantaneous causality; Magnetoencephalography; Time delay embedding

Indexed keywords


EID: 84873185183     PISSN: None     EISSN: 10994300     Source Type: Journal    
DOI: 10.3390/e15010198     Document Type: Article
Times cited : (88)

References (46)
  • 1
    • 12944275674 scopus 로고    scopus 로고
    • Measuring information transfer
    • Schreiber, T. Measuring information transfer. Phys. Rev. Lett. 2000, 2000, 461-464.
    • (2000) Phys. Rev. Lett. , vol.2000 , pp. 461-464
    • Schreiber, T.1
  • 2
    • 71549116419 scopus 로고    scopus 로고
    • Granger causality and transfer entropy are equivalent for Gaussian variables
    • Barnett, L.; Barrett, A.B.; Seth, A.K. Granger causality and transfer entropy are equivalent for Gaussian variables. Phys. Rev. Lett. 2009, 103, 238701.
    • (2009) Phys. Rev. Lett. , vol.103 , pp. 238701
    • Barnett, L.1    Barrett, A.B.2    Seth, A.K.3
  • 3
    • 79551689714 scopus 로고    scopus 로고
    • Transfer entropy in magnetoencephalographic data: Quantifying information flow in cortical and cerebellar networks
    • Wibral, M.; Rahm, B.; Rieder, M.; Lindner, M.; Vicente, R.; Kaiser, J. Transfer entropy in magnetoencephalographic data: Quantifying information flow in cortical and cerebellar networks. Progr. Biophys. Mol. Biol. 2011, 105, 80-97.
    • (2011) Progr. Biophys. Mol. Biol. , vol.105 , pp. 80-97
    • Wibral, M.1    Rahm, B.2    Rieder, M.3    Lindner, M.4    Vicente, R.5    Kaiser, J.6
  • 4
    • 79952282160 scopus 로고    scopus 로고
    • Transfer entropy-a model-free measure of effective connectivity for the neurosciences
    • Vicente, R.; Wibral, M.; Lindner, M.; Pipa, G. Transfer entropy-a model-free measure of effective connectivity for the neurosciences. J. Comp. Neurosci. 2011, 30, 45-67.
    • (2011) J. Comp. Neurosci. , vol.30 , pp. 45-67
    • Vicente, R.1    Wibral, M.2    Lindner, M.3    Pipa, G.4
  • 5
    • 70749118329 scopus 로고    scopus 로고
    • Exploring transient transfer entropy based on a group-wise ICA decomposition of EEG data
    • Vakorin, V.A.; Kovacevic, N.; McIntosh, A.R. Exploring transient transfer entropy based on a group-wise ICA decomposition of EEG data. Neuroimage 2010, 49, 1593-1600.
    • (2010) Neuroimage , vol.49 , pp. 1593-1600
    • Vakorin, V.A.1    Kovacevic, N.2    McIntosh, A.R.3
  • 6
    • 33947110329 scopus 로고    scopus 로고
    • Evaluating information transfer between auditory cortical neurons
    • Gourevitch, B.; Eggermont, J.J. Evaluating information transfer between auditory cortical neurons. J. Neurophysiol. 2007, 97, 2533-2543.
    • (2007) J. Neurophysiol. , vol.97 , pp. 2533-2543
    • Gourevitch, B.1    Eggermont, J.J.2
  • 7
    • 84866294458 scopus 로고    scopus 로고
    • Information domain approach to the investigation of cardio-vascular, cardio-pulmonary, and vasculo-pulmonary causal couplings
    • Faes, L.; Nollo, G.; Porta, A. Information domain approach to the investigation of cardio-vascular, cardio-pulmonary, and vasculo-pulmonary causal couplings. Front. Physiol. 2011, 2, 1-13.
    • (2011) Front. Physiol. , vol.2 , pp. 1-13
    • Faes, L.1    Nollo, G.2    Porta, A.3
  • 8
    • 84857036508 scopus 로고    scopus 로고
    • Non-uniform multivariate embedding to assess the information transfer in cardiovascular and cardiorespiratory variability series
    • Faes, L.; Nollo, G.; Porta, A. Non-uniform multivariate embedding to assess the information transfer in cardiovascular and cardiorespiratory variability series. Comput. Biol. Med. 2012, 42, 290-297.
    • (2012) Comput. Biol. Med. , vol.42 , pp. 290-297
    • Faes, L.1    Nollo, G.2    Porta, A.3
  • 9
    • 40549145872 scopus 로고    scopus 로고
    • Inferring the directionality of coupling with conditional mutual information
    • Vejmelka, M.; Palus, M. Inferring the directionality of coupling with conditional mutual information. Phys. Rev. E 2008, 77, 026214.
    • (2008) Phys. Rev. E , vol.77 , pp. 026214
    • Vejmelka, M.1    Palus, M.2
  • 10
    • 84867441819 scopus 로고    scopus 로고
    • Framework to study dynamic dependencies in networks of interacting processes
    • Chicharro, D.; Ledberg, A. Framework to study dynamic dependencies in networks of interacting processes. Phys. Rev. E 2012, 86, 041901.
    • (2012) Phys. Rev. E , vol.86 , pp. 041901
    • Chicharro, D.1    Ledberg, A.2
  • 11
    • 84858425279 scopus 로고    scopus 로고
    • When two become one: The limits of causality analysis of brain dynamics
    • doi:10.1371/journal.pone.0032466.
    • Chicharro, D.; Ledberg, A. When two become one: The limits of causality analysis of brain dynamics. PLoS One 2012, doi:10.1371/journal.pone.0032466.
    • (2012) PLoS One
    • Chicharro, D.1    Ledberg, A.2
  • 12
    • 77949484837 scopus 로고    scopus 로고
    • Differentiating information transfer and causal effect
    • Lizier, J.T.; Prokopenko, M. Differentiating information transfer and causal effect. Eur. Phys. J. B 2010, 73, 605-615.
    • (2010) Eur. Phys. J. B , vol.73 , pp. 605-615
    • Lizier, J.T.1    Prokopenko, M.2
  • 13
    • 33947524701 scopus 로고    scopus 로고
    • Causality detection based on information-theoretic approaches in time series analysis
    • Hlavackova-Schindler, K.; Palus, M.; Vejmelka, M.; Bhattacharya, J. Causality detection based on information-theoretic approaches in time series analysis. Phys. Rep. 2007, 441, 1-46.
    • (2007) Phys. Rep. , vol.441 , pp. 1-46
    • Hlavackova-Schindler, K.1    Palus, M.2    Vejmelka, M.3    Bhattacharya, J.4
  • 14
    • 84859652381 scopus 로고    scopus 로고
    • Transfer Entropy Estimation and Directional Coupling Change Detection in Biomedical Time Series
    • doi:10.1186/1475-925X-11-19.
    • Lee, J.; Nemati, S.; Silva, I.; Edwards, B.A.; Butler, J.P.; Malhotra, A. Transfer Entropy Estimation and Directional Coupling Change Detection in Biomedical Time Series. Biomed. Eng. 2012, doi:10.1186/1475-925X-11-19.
    • (2012) Biomed. Eng.
    • Lee, J.1    Nemati, S.2    Silva, I.3    Edwards, B.A.4    Butler, J.P.5    Malhotra, A.6
  • 15
    • 79961039100 scopus 로고    scopus 로고
    • Information-based detection of nonlinear Granger causality in multivariate processes via a nonuniform embedding technique
    • Faes, L.; Nollo, G.; Porta, A. Information-based detection of nonlinear Granger causality in multivariate processes via a nonuniform embedding technique. Phys. Rev. E 2011, 83, 051112.
    • (2011) Phys. Rev. E , vol.83 , pp. 051112
    • Faes, L.1    Nollo, G.2    Porta, A.3
  • 17
    • 84880544395 scopus 로고    scopus 로고
    • A framework for assessing frequency domain causality in physiological time series with instantaneous effects
    • in press.
    • Faes, L.; Erla, S.; Porta, A.; Nollo, G. A framework for assessing frequency domain causality in physiological time series with instantaneous effects. Philos. Transact. A 2013, in press.
    • (2013) Philos. Transact. A
    • Faes, L.1    Erla, S.2    Porta, A.3    Nollo, G.4
  • 18
    • 78649326725 scopus 로고    scopus 로고
    • Extended causal modelling to assess Partial Directed Coherence in multiple time series with significant instantaneous interactions
    • Faes, L.; Nollo, G. Extended causal modelling to assess Partial Directed Coherence in multiple time series with significant instantaneous interactions. Biol. Cybern. 2010, 103, 387-400.
    • (2010) Biol. Cybern. , vol.103 , pp. 387-400
    • Faes, L.1    Nollo, G.2
  • 19
    • 0000351727 scopus 로고
    • Investigating causal relations by econometric models and cross-spectral methods
    • Granger, C.W.J. Investigating causal relations by econometric models and cross-spectral methods. Econometrica 1969, 37, 424-438.
    • (1969) Econometrica , vol.37 , pp. 424-438
    • Granger, C.W.J.1
  • 20
    • 84894912254 scopus 로고
    • Measurement of linear dependence and feedback between multiple time series
    • Geweke, J. Measurement of linear dependence and feedback between multiple time series. J. Am. Stat. Assoc. 1982, 77, 304-313.
    • (1982) J. Am. Stat. Assoc. , vol.77 , pp. 304-313
    • Geweke, J.1
  • 21
    • 44449088854 scopus 로고    scopus 로고
    • Partial Granger causality-Eliminating exogenous inputs and latent variables
    • Guo, S.X.; Seth, A.K.; Kendrick, K.M.; Zhou, C.; Feng, J.F. Partial Granger causality-Eliminating exogenous inputs and latent variables. J. Neurosci. Methods 2008, 172, 79-93.
    • (2008) J. Neurosci. Methods , vol.172 , pp. 79-93
    • Guo, S.X.1    Seth, A.K.2    Kendrick, K.M.3    Zhou, C.4    Feng, J.F.5
  • 22
    • 77951117702 scopus 로고    scopus 로고
    • Multivariate Granger causality and generalized variance
    • Barrett, A.B.; Barnett, L.; Seth, A.K. Multivariate Granger causality and generalized variance. Phys. Rev. E 2010, 81, 041907.
    • (2010) Phys. Rev. E , vol.81 , pp. 041907
    • Barrett, A.B.1    Barnett, L.2    Seth, A.K.3
  • 23
    • 77953491241 scopus 로고    scopus 로고
    • Estimation of a Structural Vector Autoregression Model Using Non-Gaussianity
    • Hyvarinen, A.; Zhang, K.; Shimizu, S.; Hoyer, P.O. Estimation of a Structural Vector Autoregression Model Using Non-Gaussianity. J. Machine Learn. Res. 2010, 11, 1709-1731.
    • (2010) J. Machine Learn. Res. , vol.11 , pp. 1709-1731
    • Hyvarinen, A.1    Zhang, K.2    Shimizu, S.3    Hoyer, P.O.4
  • 24
    • 84857565262 scopus 로고    scopus 로고
    • Accounting for Respiration is Necessary to Reliably Infer Granger Causality From Cardiovascular Variability Series
    • Porta, A.; Bassani, T.; Bari, V.; Pinna, G.D.; Maestri, R.; Guzzetti, S. Accounting for Respiration is Necessary to Reliably Infer Granger Causality From Cardiovascular Variability Series. IEEE Trans. Biomed. Eng. 2012, 59, 832-841.
    • (2012) IEEE Trans. Biomed. Eng. , vol.59 , pp. 832-841
    • Porta, A.1    Bassani, T.2    Bari, V.3    Pinna, G.D.4    Maestri, R.5    Guzzetti, S.6
  • 25
    • 70349233762 scopus 로고    scopus 로고
    • Confounding effects of indirect connections on causality estimation
    • Vakorin, V.A.; Krakovska, O.A.; McIntosh, A.R. Confounding effects of indirect connections on causality estimation. J. Neurosci. Methods 2009, 184, 152-160.
    • (2009) J. Neurosci. Methods , vol.184 , pp. 152-160
    • Vakorin, V.A.1    Krakovska, O.A.2    McIntosh, A.R.3
  • 26
    • 31344435870 scopus 로고    scopus 로고
    • Frequency decomposition of conditional Granger causality and application to multivariate neural field potential data
    • Chen, Y.; Bressler, S.L.; Ding, M. Frequency decomposition of conditional Granger causality and application to multivariate neural field potential data. J. Neurosci. Methods 2006, 150, 228-237.
    • (2006) J. Neurosci. Methods , vol.150 , pp. 228-237
    • Chen, Y.1    Bressler, S.L.2    Ding, M.3
  • 29
    • 0000779360 scopus 로고
    • Detecting strange attractors in fluid turbulence
    • In Dynamical Systems and Turbulence, Rand, D., Young, S.L., Eds.; Springer-Verlag: Berlin, Germany
    • Takens, F. Detecting strange attractors in fluid turbulence. In Dynamical Systems and Turbulence, Rand, D., Young, S.L., Eds.; Springer-Verlag: Berlin, Germany, 1981; pp. 336-381.
    • (1981) , pp. 336-381
    • Takens, F.1
  • 30
    • 77954471498 scopus 로고    scopus 로고
    • Nonuniform state-space reconstruction and coupling detection
    • Vlachos, I.; Kugiumtzis, D. Nonuniform state-space reconstruction and coupling detection. Phys. Rev. E 2010, 82, 016207.
    • (2010) Phys. Rev. E , vol.82 , pp. 016207
    • Vlachos, I.1    Kugiumtzis, D.2
  • 32
    • 84862660973 scopus 로고    scopus 로고
    • Escaping the Curse of Dimensionality in Estimating Multivariate Transfer Entropy
    • Runge, J.; Heitzig, J.; Petoukhov, V.; Kurths, J. Escaping the Curse of Dimensionality in Estimating Multivariate Transfer Entropy. Phys. Rev. Lett. 2012, 108, 258701.
    • (2012) Phys. Rev. Lett. , vol.108 , pp. 258701
    • Runge, J.1    Heitzig, J.2    Petoukhov, V.3    Kurths, J.4
  • 33
    • 0026015905 scopus 로고
    • Approximate Entropy As A Measure of System-Complexity
    • Pincus, S.M. Approximate Entropy As A Measure of System-Complexity. Proc. Nat. Acad. Sci. USA 1991, 88, 2297-2301.
    • (1991) Proc. Nat. Acad. Sci. USA , vol.88 , pp. 2297-2301
    • Pincus, S.M.1
  • 36
    • 0035542412 scopus 로고    scopus 로고
    • A distribution free plotting position
    • Yu, G.H.; Huang, C.C. A distribution free plotting position. Stoch. Env. Res. Risk Ass. 2001, 15, 462-476.
    • (2001) Stoch. Env. Res. Risk Ass. , vol.15 , pp. 462-476
    • Yu, G.H.1    Huang, C.C.2
  • 37
    • 84860232854 scopus 로고    scopus 로고
    • Multivariate EEG spectral analysis elicits the functional link between motor and visual cortex during integrative sensorimotor tasks
    • Erla, S.; Faes, L.; Nollo, G.; Arfeller, C.; Braun, C.; Papadelis, C. Multivariate EEG spectral analysis elicits the functional link between motor and visual cortex during integrative sensorimotor tasks. Biomed. Signal Process. Contr. 2011, 7, 221-227.
    • (2011) Biomed. Signal Process. Contr. , vol.7 , pp. 221-227
    • Erla, S.1    Faes, L.2    Nollo, G.3    Arfeller, C.4    Braun, C.5    Papadelis, C.6
  • 38
    • 80055053768 scopus 로고    scopus 로고
    • Non-stationarities significantly distort short-term spectral, symbolic and entropy heart rate variability indices
    • Magagnin, V.; Bassani, T.; Bari, V.; Turiel, M.; Maestri, R.; Pinna, G.D.; Porta, A. Non-stationarities significantly distort short-term spectral, symbolic and entropy heart rate variability indices. Physiol Meas. 2011, 32, 1775-1786.
    • (2011) Physiol Meas. , vol.32 , pp. 1775-1786
    • Magagnin, V.1    Bassani, T.2    Bari, V.3    Turiel, M.4    Maestri, R.5    Pinna, G.D.6    Porta, A.7
  • 39
    • 0036686899 scopus 로고    scopus 로고
    • Short-term cardiovascular oscillations in man: measuring and modelling the physiologies
    • Cohen, M.A.; Taylor, J.A. Short-term cardiovascular oscillations in man: measuring and modelling the physiologies. J. Physiol 2002, 542, 669-683.
    • (2002) J. Physiol , vol.542 , pp. 669-683
    • Cohen, M.A.1    Taylor, J.A.2
  • 40
    • 0019629207 scopus 로고
    • Respiratory sinus arrhythmia in humans: how breathing pattern modulates heart rate
    • Hirsch, J.A.; Bishop, B. Respiratory sinus arrhythmia in humans: how breathing pattern modulates heart rate. Am. J. Physiol. 1981, 241, H620-H629.
    • (1981) Am. J. Physiol. , vol.241
    • Hirsch, J.A.1    Bishop, B.2
  • 41
    • 0027729937 scopus 로고
    • Respiration-synchronous fluctuations in stroke volume, heart rate and arterial pressure in humans
    • Toska, K.; Eriksen, M. Respiration-synchronous fluctuations in stroke volume, heart rate and arterial pressure in humans. J. Physiol 1993, 472, 501-512.
    • (1993) J. Physiol , vol.472 , pp. 501-512
    • Toska, K.1    Eriksen, M.2
  • 42
    • 77957596276 scopus 로고    scopus 로고
    • Studying brain visuo-tactile integration through cross-spectral analysis of human MEG recordings
    • In Medicon 2010, Bamidis, P.D., Pallikarakis, N., Eds.; Springer: Berlin, Germany
    • Erla, S.; Papadelis, C.; Faes, L.; Braun, C.; Nollo, G. Studying brain visuo-tactile integration through cross-spectral analysis of human MEG recordings. In Medicon 2010, IFMBE Proceedings, Bamidis, P.D., Pallikarakis, N., Eds.; Springer: Berlin, Germany, 2010; 73-76.
    • (2010) IFMBE Proceedings , pp. 73-76
    • Erla, S.1    Papadelis, C.2    Faes, L.3    Braun, C.4    Nollo, G.5
  • 43
    • 45849102361 scopus 로고    scopus 로고
    • Understanding brain connectivity from EEG data by identifying systems composed of interacting sources
    • Marzetti, L.; del Gratta, C.; Nolte, G. Understanding brain connectivity from EEG data by identifying systems composed of interacting sources. Neuroimage 2008, 42, 87-98.
    • (2008) Neuroimage , vol.42 , pp. 87-98
    • Marzetti, L.1    del Gratta, C.2    Nolte, G.3
  • 44
    • 49849087991 scopus 로고    scopus 로고
    • Multisensory integration: A functional role for inter-area synchronization?
    • Bauer, M. Multisensory integration: A functional role for inter-area synchronization? Curr. Biol. 2008, 18, R709-R710.
    • (2008) Curr. Biol. , vol.18
    • Bauer, M.1
  • 46
    • 84862276538 scopus 로고    scopus 로고
    • Causal information approach to partial conditioning in multivariate data sets
    • Marinazzo, D.; Pellicoro, M.; Stramaglia, S. Causal information approach to partial conditioning in multivariate data sets. Comput. Math. Methods Med. 2012, 2012, 303601.
    • (2012) Comput. Math. Methods Med. , vol.2012 , pp. 303601
    • Marinazzo, D.1    Pellicoro, M.2    Stramaglia, S.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.