Chitinase modifying proteins from phyllogenetically distinct lineages of Brassica pathogens

Physiological and Molecular Plant Pathology

Volumn 82, Issue , 2013, Pages 1-9

  Naumann, Todd A ^a   Wicklow, Donald T ^a  

^a NATIONAL CENTER FOR AGRICULTURAL UTILIZATION RESEARCH   (United States)

Author keywords

Alternaria brassicae; Alternaria brassicicola; Arabidopsis thaliana; Brassicaceae; Chitinase modifying protein; Colletotrichum higginsianum; Crucifer; Fungalysin; Fusarium oxysporum; Fusarium verticillioides; Leptosphaeria maculans; Mycosphaerella brassicicola; Mycosphaerella capsellae; Pyrenopeziza brassicae; Sclerotinia sclerotiorum; Thanatephorus cucumeris; Verticillium longisporum; Zea mays

Indexed keywords

ALTERNARIA; ALTERNARIA BRASSICAE; ALTERNARIA BRASSICICOLA; ARABIDOPSIS THALIANA; ASCOMYCOTA; BRASSICA; BRASSICA NAPUS; BRASSICA NAPUS VAR. NAPUS; BRASSICACEAE; COLLETOTRICHUM; COLLETOTRICHUM HIGGINSIANUM; DOTHIDEOMYCETES; FUNGI; FUSARIUM OXYSPORUM; GIBBERELLA FUJIKUROI; GIBBERELLA MONILIFORMIS; LEOTIOMYCETES; LEPTOSPHAERIA MACULANS; MYCOSPHAERELLA BRASSICICOLA; MYCOSPHAERELLA CAPSELLAE; PYRENOPEZIZA BRASSICAE; SCLEROTINIA SCLEROTIORUM; SORDARIOMYCETES; THANATEPHORUS CUCUMERIS; VERTICILLIUM (HYPOCREALES); VERTICILLIUM (PHYLLACHORALES); VERTICILLIUM DAHLIAE VAR. LONGISPORUM; ZEA MAYS;

EID: 84873111081     PISSN: 08855765     EISSN: 10961178     Source Type: Journal    
DOI: 10.1016/j.pmpp.2012.12.001     Document Type: Article

References (54)

1. Jones A.M., Chory J., Dangl J.L., Estelle M., Jacobsen S.E., Meyerowitz E.M., et al. The impact of Arabidopsis on human health: diversifying our portfolio. Cell 2008, 133:939-943.
2. Rimmer R.S., Shattuck V.I., Buchwaldt L. Compendium of brassica diseases 2006, American Phytopathological Society Press, St Paul, p. 1-117.
3. Meena P., Awasthi R., Chattopadhyay C., Kolte S., Kumar A. Alternaria blight: a chronic disease in rapeseed-mustard. J Oilseed Brassica 2010, 1:1-11.
4. West J.S., Kharbanda P.D., Barbetti M.J., Fitt B.D.L. Epidemiology and management of Leptosphaeria maculans (Phoma stem canker) on oilseed rape in Australia, Canada and Europe. Plant Pathol 2001, 50:10-27.
5. Reis A., Boiteux L.S. Alternaria species infecting Brassicaceae in the Brazilian neotropics: geographical distribution, host range and specificity. J Plant Pathol 2010, 92:661-668.
6. Inderbitzin P., Davis R.M., Bostock R.M., Subbarao K.V. The ascomycete Verticillium longisporum is a hybrid and a plant pathogen with an expanded host range. PLoS ONE 2011, 6(3):e18260.
7. Giles T., Evans N., Fitt B.D.L., Jeger M.J. Epidemiology in relation to methods for forecasting light leaf spot (Pyrenopeziza brassicae) severity on winter oilseed rape (Brassica napus) in the UK. Eur J Plant Pathol 2000, 106:593-605.
8. Kasprzewska A. Plant chitinases - regulation and function. Cell Mol Biol Lett 2003, 8:809-824.
9. Gomez L., Allona I., Casado R., Aragoncillo C. Seed chitinases. Seed Sci Res 2002, 12:217-230.
10. Schlumbaum A., Mauch F., Vogeli U., Boller T. Plant chitinases are potent inhibitors of fungal growth. Nature 1986, 324:365-367.
11. Huynh Q., Hironaka C., Levine E., Smith C., Borgmeyer J., Shah D. Antifungal proteins from plants. Purification, molecular cloning, and antifungal properties of chitinases from maize seed. J Biol Chem 1992, 267:6635-6640.
12. Kaku H., Nishizawa Y., Ishii-Minami N., Akimoto-Tomiyama C., Dohmae N., Takio K., et al. Plant cells recognize chitin fragments for defense signaling through a plasma membrane receptor. Proc Natl Acad Sci U.S.A 2006, 103:11086-11091.
13. van den Burg H.A., Harrison S.J., Joosten M.H.A.J., Vervoort J., de Wit P.J.G.M. Cladosporium fulvum Avr4 protects fungal cell walls against hydrolysis by plant chitinases accumulating during infection. Mol Plant Microbe Interact 2006, 19:1420-1430.
14. Lange J., Mohr U., Wiemken A., Boller T., Vogeli-Lange R. Proteolytic processing of class IV chitinase in the compatible interaction of bean roots with Fusarium solani. Plant Physiol 1996, 111:1135-1144.
15. Olivieri F., Zanetti M.E., Oliva C., Covarrubias A., Casalongue C. Characterization of an extracellular serine protease of Fusarium eumartii and its action on pathogenesis related proteins. Eur J Plant Pathol 2002, 108:63-72.
16. De Jong A.J., Cordewener J., Lo Schiavio F., Terzi M., Vandekerckhove J., van Kammen A. A carrot somatic embryo mutant is rescued by chitinase. Plant Cell 1992, 4:425-433.
17. Gerhardt deA L.B., Magioli C., Perez A., Margis R., Sachetto-Martins G., Margis-Pinheiro M. AtchitIV gene expression is stimulated under abiotic stresses and is spatially and temporally regulated during embryo development. Genet Mol Biol 2004, 27:118-123.
18. Schnable P.S., Ware D., Fulton R.S., Stein J.C., Wei F., Pasternak S., et al. The B73 maize genome: complexity, diversity, and dynamics. Science 2009, 326:1112-1115.
19. Naumann T.A., Wicklow D.T., Kendra D.F. Maize seed chitinase is modified by a protein secreted by Bipolaris zeicola. Physiol Mol Plant Pathol 2009, 74:134-141.
20. Naumann T.A., Wicklow D.T. Allozyme-specific modification of a maize seed chitinase by a protein secreted by the fungal pathogen Stenocarpella maydis. Phytopathology 2010, 100:645-654.
21. Naumann T.A. Modification of recombinant maize ChitA chitinase by fungal chitinase-modifying proteins. Mol Plant Pathol 2011, 12:365-372.
22. Naumann T.A., Wicklow D.T., Price N.P.J. Identification of a chitinase-modifying protein from Fusarium verticillioides: truncation of a host resistance protein by a fungalysin metalloprotease. J Biol Chem 2011, 286:35358-35366.
23. Ma L.J., van der Does H.C., Borkovich K.A., Coleman J.J., Daboussi M.J., Di Pietro A., et al. Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium. Nature 2010, 464:367-373.
24. Shinde U, Inouye M. Intromolecular chaperones and protein folding. Trends Biochem Sci 18:442-6.
25. Markaryan A., Morozova I., Yu H., Kolattukudy P.E. Purification and characterization of an elastinolytic metalloprotease from Aspergillus fumigatus and immunoelectron microscopic evidence of secretion of this enzyme by the fungus invading the murine lung. Infect Immun 1994, 62:2149-2157.
26. Sirakova T.D., Markaryan A., Kolattukudy P.E. Molecular cloning and sequencing of the cDNA and gene for a novel elastinolytic metalloproteinase from Aspergillus fumigatus and its expression in Escherichia coli. Infect Immun 1994, 62:4208-4218.
27. Brouta F., Descamps F., Monod M., Vermout S., Losson B., Mignon B. Secreted metalloprotease gene family of Microsporum canis. Infect Immun 2002, 70:5676-5683.
28. Jousson O., Lechenne B., Bontems O., Capoccia S., Mignon B., Barblan J., et al. Multiplication of an ancestral gene encoding secreted fungalysin preceded species differentiation in the dermatophytes Trichophyton and Microsporum. Microbiology 2004, 150:301-310.
29. Naumann T.A., Price N.P.J. Truncation of class IV chitinases from Arabidopsis by secreted fungal proteases. Mol Plant Pathol 2012, 13:1135-1139.
30. The Arabidopsis Initiative Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 2000, 408:796-815.
31. Wang X., Wang H., Wang J., Sun R., Wu J., Liu S., et al. The genome of the mesopolyploid crop species Brassica rapa. Nat Genet 2011, 43:1035-1039.
32. Rasmussen U., Bojsen K., Collinge D.B. Cloning and characterization of a pathogen-induced chitinase in Brassica napus. Plant Mol Biol 1992, 20:277-287.
33. De-la-Pena C., Badri D.V., Lei Z., Watson B.S., Brandao M.M., Silva-Filho M.C., et al. Root secretion of defense-related proteins is development-dependent and correlated with flowering time. J Biol Chem 2010, 285:30654-30665.
34. Ahmed N.U., Park Jl, Jung H.J., Kang K.K., Hur Y., Lim Y.P., et al. Molecular characterization of stress resistance-related chitinase genes of Brassica rapa. Plant Physiol Biochem 2012, 58:106-115.
35. Buhtz A., Kolasa A., Arlt K., Walz C., Kehr J. Xylem sap protein composition is conserved among different plant species. Planta 2004, 219:610-618.
36. Soanes D.M., Richards T.A., Talbot N.J. Insights from sequencing fungal and oomycete genomes: what we can learn about plant disease and the evolution of pathogenicity?. Plant Cell 2007, 19:3318-3326.
37. Schoch C.L., Sung G.H., Lopez-Giraldez F., Townsend J.P., Miadlikowska J., Hofstetter V. The Ascomycete tree of life: a phylum-wide phylogeny clarifies the origin and evolution of fundamental reproductive traits. Syst Biol 2009, 58:224-239.
38. O'Donnell K. Progress towards a phylogenetic classification of Fusarium. Sydowia 1996, 48:57-70.
39. White T.J., Bruns T., Lee S., Taylor J.W. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. PCR protocols: a guide to methods and applications 1990, 315-322. Academic Press, New York. M.A. Innis, D.H. Gilfand, J.J. Sninsky, T.J. White (Eds.).
40. O'Donnell K., Kistler H.C., Cigelnik E., Ploetz R.C. Multiple evolutionary origins of the fungus causing panama disease of banana: concordant evidence from nuclear and mitochondrial gene genealogies. Proc Natl Acad Sci U.S.A 1998, 95:2044-2049.
41. Altschul S.F., Madden T.L., Schaffer A.A., Zhang J., Zhang Z., Miller W., et al. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 1997, 25:3389-3402.
42. Thompson J.D., Higgins D.G., Gibson T.J. CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 1994, 22:4673-4680.
43. Rice P., Longden I., Bleasby A. EMBOSS: the European molecular biology open software suite. Trends Genet 2000, 16:276-277.
44. Wight W.D., Kim K.H., Lawrence C.B., Walton J.D. Biosynthesis and role in virulence of the histone deacetylase inhibitor depudecin from Alternaria brassicicola. Mol Plant Microbe Interact 2009, 22:1258-1267.
45. O'Connell R., Herbert C., Sreenivasaprasad S., Khatib M., Esquerre-Tugaye M.-T., Dumas B. A novel Arabidopsis-Colletotrichum pathosystem for the molecular dissection of plant-fungal interactions. Mol Plant Microbe Interact 2004, 17:272-282.
46. Chanda B., Venugopal C., Kulshrestha S., Navarre D.A., Downie B., Vaillancourt L., et al. Glycerol-3-Phosphate levels are associated with basal resistance to the hemibiotrophic fungus Colletotrichum higginsianum in Arabidopsis. Plant Physiol 2008, 147:2017-2029.
47. Bonman J.M., Delwiche P.A., Gabrielson R.L., Williams P.H. Leptosphaeria maculans on cabbage in Wisconsin. Plant Dis 1980, 64:326.
48. Maddock S.E., Ingram D.S., Gilligan C.A. Resistance of cultivated brassicas to Pyrenopeziza brassicae. Trans Brit Mycol Soc 1981, 76:371-382.
49. Simons A.J., Skidmore D.I. Race-specific resistance to light leaf spot in Brassica oleracea. Trans Brit Mycol Soc 1988, 90:431-435.
50. Rawlinson C.J., Muthyalu G., Cayley G.R. Fungicide effects on light leaf spot, canker, crop growth and yield of winter oil-seed rape. J Agric Sci 1984, 103:613-628.
51. Wong A.L., Willetts H.J. Electrophoretic studies of Australasian, North American and European isolates of Sclerotinia sclerotiorum and related species. J Gen Microbiol 1975, 90:355-359.
52. Rouxel T., Grandaubert J., Hane J.K., Hoede C., van de Wouw A.P., Couloux A., et al. Effector diversification within compartments of the Leptosphaeria maculans genome affected by repeat-induced point mutations. Nat Commun 2011, 2:202. 10.1038/ncomms1189.
53. Veluchamy S., Williams B., Kim K., Dickman M.B. The CuZn superoxide dismutase from Sclerotinia sclerotiorum is involved with oxidative stress tolerance, virulence, and oxalate production. Physiol Mol Plant Path 2012, 78:14-23.
54. Adams G.C. Thanatophorus cucumeris (Rhizoctonia solani), a species complex of wide host range. Adv Plant Pathol 1988, 6:535-552.