Redescription of Parasonderia vestita (Kahl, 1928) comb. nov. (Ciliophora, Plagiopylida), with notes on its phylogeny based on SSU rRNA gene

European Journal of Protistology

Volumn 49, Issue 1, 2013, Pages 106-113

  Xu, Yuan ^a   Shao, Chen ^b   Miao, Miao ^c   Song, Weibo ^a  

^a OCEAN UNIVERSITY OF CHINA   (China)

^b XI'AN JIAOTONG UNIVERSITY   (China)

^c UNIVERSITY OF CHINESE ACADEMY OF SCIENCES   (China)

Author keywords

Marine ciliate; Parasonderia; Plagiopylida; SSU rRNA gene; Taxonomy

Indexed keywords

PROTOZOAL DNA;

ARTICLE; CHINA; CILIATE; CLASSIFICATION; GENETICS; PHYLOGENY; RNA GENE; SPECIES DIFFERENCE; ULTRASTRUCTURE;

CHINA; CILIOPHORA; DNA, PROTOZOAN; GENES, RRNA; PHYLOGENY; SPECIES SPECIFICITY;

CILIOPHORA; LECHRIOPYLA MYSTAX; PLAGIOPYLA; PLAGIOPYLA FRONTATA; PLAGIOPYLA NASUTA;

EID: 84873085270     PISSN: 09324739     EISSN: 16180429     Source Type: Journal    
DOI: 10.1016/j.ejop.2012.03.001     Document Type: Article

References (31)

1. Aescht E. Catalogue of the generic names of ciliates (Protozoa, Ciliophora). Denisia 2001, 1:1-350.
2. Alexander E., Stock A., Breiner H., Behnke A., Bunge J., Yakimov M.M., Stoeck T. Microbial eukaryotes in the hypersaline anoxic L'Atalante deep-sea basin. Environ. Microbiol. 2009, 11:360-381.
3. Behnke A., Barger K.J., Bunge J., Stoeck T. Spatio-temporal variations in protistan communities along an O/HS gradient in the anoxic Framvaren Fjord (Norway). FEMS Microbiol. Ecol. 2010, 72:89-102.
4. Corliss J.O. The Ciliated Protozoa: Characterization, Classification and Guide to the Literature 1979, Pergamon Press, Oxford/New York/Toronto/Sydney/Paris/Frankfurt. 2nd ed.
5. Dunthorn M., Foissner W., Katz L.A. Molecular phylogenetic analysis of class Colpodea (phylum Ciliophora) using broad taxon sampling. Mol. Phylogenet. Evol. 2008, 46:316-327.
6. Embley T.M., Finlay B.J., Dyal P.L., Hirt R.P. Multiple origins of anaerobic ciliates with hydrogenosomes within the radiation of aerobic ciliates. Proc. R. Soc. Ser. B 1995, 262:87-93.
7. Fauré-Fremiet E. Le genre Parasonderia n. g. C. R. Acad. Sci. Paris 1973, 276:2011-2014.
8. Foissner W., Stoeck T. Cotterillia bromelicola nov. gen., nov. spec., a gonostomatid ciliate (Ciliophora, Hypotricha) from tank bromeliads (Bromeliaceae) with de novo originating dorsal kineties. Eur. J. Protistol. 2011, 47:29-50.
9. ICZN (International Commission on Zoological Nomenclature) International Code of Zoological Nomenclature 1999, International Trust for Zoological Nomenclature, London.
10. Jankowski A.W. Phylum Ciliophora Doflein, 1901. Protista. Part 2, Handbook on Zoology. Russian Academy of Sciences 2007, 415-993. Zoological Institute Press, St. Petersburg, (in Russian with English summary). A.F. Alimov (Ed.).
11. Kahl A. Die infusorien (Ciliata) der Oldesloer Salzwasserstellen. Arch. Hydrobiol. 1928, 19:50-123.
12. Kahl A. Familie Plagiopylidae Schew. Ann. Protistol. 1931, 3:111-135.
13. Kahl A. Urtiere oder Protozoa I: Wimpertiere oder Ciliata (Infusoria) 2. Holotricha außer den im 1. Teil behandelten Prostomata. Tierwelt Dtl. 1931, 21:181-398.
14. Lefèvre E., Roussel B., Amblard C., Sime-Ngando T. The molecular diversity of freshwater picoeukaryotes reveals high occurrence of putative parasitoids in the plankton. PLoS One 2008, 3:e2324.
15. Lefranc M., Thénot A., Lepère C., Debroas D. Genetic diversity of small eukaryotes in lakes inferring by their trophic status. Appl. Environ. Microbiol. 2005, 71:5935-5942.
16. Luo W., Bock C., Li H., Padisák J., Krienitz L. Molecular and microscopic diversity of planktonic eukaryotes in the oligotrophic Lake Stechlin (Germany). Hydrobiologia 2011, 661:133-143.
17. Lynn D.H. The Ciliated Protozoa: Characterization, Classification and Guide to the Literature 2008, Springer, Dordrecht. 3rd ed.
18. Lynn D.H., Small E.B. Phylum Ciliophora Doflein, 1901. An Illustrated Guide to the Protozoa 2002, 371-656. Society of Protozoologists, Lawrence, Kansas. 2nd ed. J.J. Lee, G.F. Leedale, P.C. Bradbury (Eds.).
19. Lynn D.H., Strüder-Kypke M.C. Phylogenetic position of Licnophora, Lechriopyla, and Schizocaryum, three unusual ciliates (Phylum Ciliophora) endosymbiotic in echinoderms (Phylum Echinodermata). J. Eukaryot. Microbiol. 2002, 49:460-468.
20. Nylander J.A. MrModeltest v2 2004, Uppsala University Press, Uppsala.
21. Ronquist F., Huelsenbeck J.P. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 2003, 19:1572-1574.
22. Shinzato N., Watanabe I., Meng X., Sekiguchi Y., Tamaki H., Matsui T., Kamagata Y. Phylogenetic analysis and fluorescence in situ hybridization detection of archaeal and bacterial endosymbionts in the anaerobic ciliate Trimyema compressum. Microbiol. Ecol. 2007, 54:627-636.
23. Song W., Wilbert N. Benthische Ciliaten des Süβwassers. Praktikum der Protozoologie 1995, 156-168. G. Fischer, Stuttgart. R. Röttger (Ed.).
24. Stamatakis A., Hoover P., Rougemont J. A rapid bootstrap algorithm for the RAxML web-servers. Syst. Biol. 2008, 75:758-771.
25. Stoeck T., Foissner W., Lynn D.H. Small-subunit rRNA phylogenies suggest that Epalxella antiquorum (Penard, 1922) Corliss, 1960 (Ciliophora, Odontostomatida) is a member of the Plagyopylea. J. Eukaryot. Microbiol. 2007, 54:436-442.
26. Takishita K., Tsuchiya M., Kawato M., Oguri K., Kitazato H., Maruyama T. Genetic diversity of microbial eukaryotes in anoxic sediment of the saline meromictic lake Namako-ike (Japan): on the detection of anaerobic or anoxic-tolerant lineages of eukaryotes. Protist 2007, 158:51-64.
27. Takishita K., Kakizoe N., Yoshida T., Maruyama T. Molecular evidence that phylogenetically diverged ciliates are active in microbial mats of deep-sea cold-seep sediment. J. Eukaryot. Microbiol. 2010, 57:76-86.
28. Wilbert N. Eine verbesserte Technik der Protargolimprägnation für Ciliaten. Mikrokosmos 1975, 64:171-179.
29. Zhang Q., Yi Z., Song W., Al-Rasheid K.A.S., Warren A. The systematic position of Paraspathidium Noland, 1937 (Ciliophora, Litostomatea?) inferred from primary SSU rRNA gene sequences and predicted secondary rRNA structure. Eur. J. Protistol. 2010, 46:280-288.
30. Zhang Q., Miao M., Strüder-Kypke M.C., Al-Rasheid K.A.S., Al-Farraj S.A., Song W. Molecular evolution of Cinetochilum and Sathrophilus (Protozoa, Ciliophora, Oligohymenophorea), two genera of ciliates with morphological affinities to scuticociliates. Zool. Scr. 2011, 40:317-325.
31. Zuendorf A., Bunge J., Behnke A., Barger K.J., Stoeck T. Diversity estimates of microeukaryotes below the chemocline of the anoxic Mariager Fjord, Denmark. FEMS Microbiol. Ecol. 2006, 58:476-491.