Characterization of 17 microsatellite loci for use in population genetic and mating system studies of the endangered North American passerine, loggerhead shrike (Lanius ludovicianus)

Conservation Genetics Resources

Volumn 4, Issue 2, 2012, Pages 503-506

  Coxon, Angela ^a,b   Chabot, Amy A ^c   Lougheed, Stephen C ^c   Dávila, José Antonio ^d   White, Bradley ^a  

^a TRENT UNIVERSITY   (Canada)

^b Government of Nunavut   (Canada)

^c QUEEN S UNIVERSITY   (Canada)

^d INSTITUTO DE INVESTIGACIÓN EN RECURSOS CINEGÉTICOS IREC CSIC UCLM JCCM   (Spain)

Author keywords

Conservation genetics; Laniidae; Microsatellites; Parentage; Passerine; Pedigree analysis; Population genetic structure

Indexed keywords

EID: 84873066125     PISSN: 18777252     EISSN: 18777260     Source Type: Journal    
DOI: 10.1007/s12686-011-9585-2     Document Type: Article

References (16)

1. Brookfield JFY (1996) A simple new method for estimating null allele frequency from heterozygote deficiency. Mol Ecol 5: 453-455.
2. Hamilton MB, Pincus EL, Difore A, Fleischer RC (1999a) A universal linker and ligation procedure of genomic libraries enriched for microsatellites. Biotechniques 24: 504-507.
3. Hamilton MB, Pincus EL, Difore A, Fleischer RC (1999b) Universal linker and ligation procedures for construction of genomic DNA libraries enriched for microsatellites. Biotechniques 27: 500-507.
4. Miller AH (1931) Systematic revision and natural history of the American shrikes (Lanius). Univ Calif Publ Zool 38: 11-242.
5. Monroe BL Jr, Sibley CG (1993) A world checklist of birds. New Haven, Yale University Press.
6. Mundy NI, Woodruff DS (1996) Polymorphic microsatellite markers in the loggerhead shrike Lanius ludovicianus isolated from a library enriched for CA repeats. Mol Ecol 5: 811-813.
7. Peakall R, Smouse PE (2006) GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research. Mol Ecol Resour 6: 288-295.
8. Phillips AR (1986) The known birds of North and Middle America. Part 1. Denver, Allan R. Phillips.
9. Pruitt L (2000) Loggerhead Shrike status assessment. U. S. Fish and Wildlife Service, Fort Snelling.
10. Rand AL (1957) Lanius ludovicianus miamensis Bishop, a valid race from southern Florida. Auk 74: 503-505.
11. Refseth UH, Fangan BM, Jakobsen KS (1997) Hybridization capture of microsatellites directly from genomic DNA. Electrophoresis 18: 1519-1523.
12. Rice WR (1989) Analyzing tables of statistical tests. Evolution 43: 223-225.
13. Rousset F (2008) GENEPOP'007: a complete reimplementation of the GENEPOP software for Windows and Linux. Mol Ecol Resour 8: 103-106.
14. Rozen S, Skaletsky HJ (2000) Primer 3. Available: http://www-genome. wi. mit. edu/genome_software/other/primer3. html.
15. Sambrook J, Fritsch EF, Maniatis T (1989) Molecular cloning: a laboratry manual, 3rd edn. Cold Spring Harbor, New York.
16. van Oosterhout CV, Hutchison WF, Wills DPM, Shipley P (2004) Micro-checker: software for identifying and correcting genotyping errors in microsatellite data. Mol Ecol Resour 4: 535-538.