-
1
-
-
79955103273
-
-
WHO, Available
-
WHO (2011) Global tuberculosis control: WHO report 2011. Available: http://www.who.int/tb/publications/global_report/en/index.html. Accessed 2012 Oct 24.
-
(2011)
Global tuberculosis control: WHO report 2011
-
-
-
2
-
-
41849118808
-
Confronting the scientific obstacles to global control of tuberculosis
-
Young DB, Perkins MD, Duncan K, Barry CE 3rd (2008) Confronting the scientific obstacles to global control of tuberculosis. J Clin Invest 118: 1255-1265.
-
(2008)
J Clin Invest
, vol.118
, pp. 1255-1265
-
-
Young, D.B.1
Perkins, M.D.2
Duncan, K.3
Barry 3rd, C.E.4
-
3
-
-
70350478800
-
The past and future of tuberculosis research
-
Comas I, Gagneux S, (2009) The past and future of tuberculosis research. PLoS Pathog 5: e1000600.
-
(2009)
PLoS Pathog
, vol.5
-
-
Comas, I.1
Gagneux, S.2
-
4
-
-
84858376593
-
The impact of the gut microbiota on human health: an integrative view
-
Clemente JC, Ursell LK, Parfrey LW, Knight R, (2012) The impact of the gut microbiota on human health: an integrative view. Cell 148: 1258-1270.
-
(2012)
Cell
, vol.148
, pp. 1258-1270
-
-
Clemente, J.C.1
Ursell, L.K.2
Parfrey, L.W.3
Knight, R.4
-
5
-
-
24044455869
-
Genome sequencing in microfabricated high-density picolitre reactors
-
Margulies M, Egholm M, Altman WE, Attiya S, Bader JS, et al. (2005) Genome sequencing in microfabricated high-density picolitre reactors. Nature 437: 376-380.
-
(2005)
Nature
, vol.437
, pp. 376-380
-
-
Margulies, M.1
Egholm, M.2
Altman, W.E.3
Attiya, S.4
Bader, J.S.5
-
6
-
-
84859905060
-
Contrasting denitrifier communities relate to contrasting N2O emission patterns from acidic peat soils in arctic tundra
-
Palmer K, Biasi C, Horn MA, (2012) Contrasting denitrifier communities relate to contrasting N2O emission patterns from acidic peat soils in arctic tundra. ISME J 6: 1058-1077.
-
(2012)
ISME J
, vol.6
, pp. 1058-1077
-
-
Palmer, K.1
Biasi, C.2
Horn, M.A.3
-
7
-
-
77954834182
-
Composition and genetic diversity of picoeukaryotes in subtropical coastal waters as revealed by 454 pyrosequencing
-
Cheung MK, Au CH, Chu KH, Kwan HS, Wong CK, (2010) Composition and genetic diversity of picoeukaryotes in subtropical coastal waters as revealed by 454 pyrosequencing. ISME J 4: 1053-1059.
-
(2010)
ISME J
, vol.4
, pp. 1053-1059
-
-
Cheung, M.K.1
Au, C.H.2
Chu, K.H.3
Kwan, H.S.4
Wong, C.K.5
-
8
-
-
80054851581
-
Gastrointestinal microbiome signatures of pediatric patients with irritable bowel syndrome
-
Saulnier DM, Riehle K, Mistretta TA, Diaz MA, Mandal D, et al. (2011) Gastrointestinal microbiome signatures of pediatric patients with irritable bowel syndrome. Gastroenterology 141: 1782-1791.
-
(2011)
Gastroenterology
, vol.141
, pp. 1782-1791
-
-
Saulnier, D.M.1
Riehle, K.2
Mistretta, T.A.3
Diaz, M.A.4
Mandal, D.5
-
9
-
-
84865781286
-
Prevalence of streptococci and increased polymicrobial diversity associated with cystic fibrosis patient stability
-
Filkins LM, Hampton TH, Gifford AH, Gross MJ, Hogan DA, et al. (2012) Prevalence of streptococci and increased polymicrobial diversity associated with cystic fibrosis patient stability. J Bacteriol 194: 4709-4717.
-
(2012)
J Bacteriol
, vol.194
, pp. 4709-4717
-
-
Filkins, L.M.1
Hampton, T.H.2
Gifford, A.H.3
Gross, M.J.4
Hogan, D.A.5
-
10
-
-
78650586813
-
Phylogenetic and metabolic diversity of bacteria associated with cystic fibrosis
-
Guss AM, Roeselers G, Newton IL, Young CR, Klepac-Ceraj V, et al. (2011) Phylogenetic and metabolic diversity of bacteria associated with cystic fibrosis. ISME J 5: 20-29.
-
(2011)
ISME J
, vol.5
, pp. 20-29
-
-
Guss, A.M.1
Roeselers, G.2
Newton, I.L.3
Young, C.R.4
Klepac-Ceraj, V.5
-
11
-
-
84867563577
-
Microbiome diversity in the bronchial tract of patients with chronic obstructive pulmonary disease
-
Cabrera-Rubio R, Garcia-Núñez M, Setó L, Antó JM, Moya A, et al. (2012) Microbiome diversity in the bronchial tract of patients with chronic obstructive pulmonary disease. J Clin Microbiol 50: 3562-3568.
-
(2012)
J Clin Microbiol
, vol.50
, pp. 3562-3568
-
-
Cabrera-Rubio, R.1
Garcia-Núñez, M.2
Setó, L.3
Antó, J.M.4
Moya, A.5
-
12
-
-
77957302426
-
Analysis of the microbiota of sputum samples from patients with lower respiratory tract infections
-
Zhou Y, Lin P, Li Q, Han L, Zheng H, et al. (2010) Analysis of the microbiota of sputum samples from patients with lower respiratory tract infections. Acta Biochim Biophys Sin (Shanghai) 42: 754-76.
-
(2010)
Acta Biochim Biophys Sin (Shanghai)
, vol.42
, pp. 754-776
-
-
Zhou, Y.1
Lin, P.2
Li, Q.3
Han, L.4
Zheng, H.5
-
13
-
-
70349487758
-
Opportunistic pathogens enriched in showerhead biofilms
-
Feazel LM, Baumgartner LK, Peterson KL, Frank DN, Harris JK, et al. (2009) Opportunistic pathogens enriched in showerhead biofilms. Proc Natl Acad Sci U S A 106: 16393-16399.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 16393-16399
-
-
Feazel, L.M.1
Baumgartner, L.K.2
Peterson, K.L.3
Frank, D.N.4
Harris, J.K.5
-
14
-
-
84872855123
-
Prevalence and diversity of Synergistetes taxa in periodontal health and disease
-
In press
-
You M, Mo S, Watt RM, Leung WK Prevalence and diversity of Synergistetes taxa in periodontal health and disease. J Periodontal Res. In press.
-
J Periodontal Res
-
-
You, M.1
Mo, S.2
Watt, R.M.3
Leung, W.K.4
-
15
-
-
77957357555
-
The human oral microbiome
-
Dewhirst FE, Chen T, Izard J, Paster BJ, Tanner AC, et al. (2010) The human oral microbiome. J Bacteriol 192: 5002-5017.
-
(2010)
J Bacteriol
, vol.192
, pp. 5002-5017
-
-
Dewhirst, F.E.1
Chen, T.2
Izard, J.3
Paster, B.J.4
Tanner, A.C.5
-
16
-
-
78650088377
-
-
Stop TB Partnership, Available
-
Stop TB Partnership (2011) The global plan to stop TB 2011-2015. Available: http://www.stoptb.org/global/plan/. Accessed 2012 Oct 24.
-
(2011)
The global plan to stop TB 2011-2015
-
-
-
17
-
-
79952748287
-
Unravelling the effects of the environment and host genotype on the gut microbiome
-
Spor A, Koren O, Ley R, (2011) Unravelling the effects of the environment and host genotype on the gut microbiome. Nat Rev Microbiol 9: 279-290.
-
(2011)
Nat Rev Microbiol
, vol.9
, pp. 279-290
-
-
Spor, A.1
Koren, O.2
Ley, R.3
-
18
-
-
77950669604
-
The effect of diet on the human gut microbiome: a metagenomic analysis in humanized gnotobiotic mice
-
Turnbaugh PJ, Ridaura VK, Faith JJ, Rey FE, Knight R, et al. (2009) The effect of diet on the human gut microbiome: a metagenomic analysis in humanized gnotobiotic mice. Sci Transl Med 1: 6ra14.
-
(2009)
Sci Transl Med
, vol.1
-
-
Turnbaugh, P.J.1
Ridaura, V.K.2
Faith, J.J.3
Rey, F.E.4
Knight, R.5
-
19
-
-
84858439578
-
The human microbiome: at the interface of health and disease
-
Cho I, Blaser MJ, (2012) The human microbiome: at the interface of health and disease. Nat Rev Genet 13: 260-270.
-
(2012)
Nat Rev Genet
, vol.13
, pp. 260-270
-
-
Cho, I.1
Blaser, M.J.2
-
21
-
-
37249089774
-
Value of single acid-fast bacilli sputum smears in the diagnosis of tuberculosis in HIV-positive subjects
-
Vignesh R, Balakrishnan P, Shankar EM, Murugavel KG, Hanas S, et al. (2007) Value of single acid-fast bacilli sputum smears in the diagnosis of tuberculosis in HIV-positive subjects. J Med Microbiol 56: 1709-1710.
-
(2007)
J Med Microbiol
, vol.56
, pp. 1709-1710
-
-
Vignesh, R.1
Balakrishnan, P.2
Shankar, E.M.3
Murugavel, K.G.4
Hanas, S.5
-
22
-
-
84859576702
-
Decade-long bacterial community dynamics in cystic fibrosis airways
-
Zhao J, Schloss PD, Kalikin LM, Carmody LA, Foster BK, et al. (2012) Decade-long bacterial community dynamics in cystic fibrosis airways. Proc Natl Acad Sci U S A 109: 5809-5814.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 5809-5814
-
-
Zhao, J.1
Schloss, P.D.2
Kalikin, L.M.3
Carmody, L.A.4
Foster, B.K.5
-
24
-
-
68949175293
-
Neisseria meningitidis: epidemiology, treatment and prevention in adolescents
-
Brigham KS, Sandora TJ, (2009) Neisseria meningitidis: epidemiology, treatment and prevention in adolescents. Curr Opin Pediatr 21: 437-443.
-
(2009)
Curr Opin Pediatr
, vol.21
, pp. 437-443
-
-
Brigham, K.S.1
Sandora, T.J.2
-
25
-
-
77956059369
-
The genus Prevotella in cystic fibrosis airways
-
Field TR, Sibley CD, Parkins MD, Rabin HR, Surette MG, (2010) The genus Prevotella in cystic fibrosis airways. Anaerobe 16: 337-344.
-
(2010)
Anaerobe
, vol.16
, pp. 337-344
-
-
Field, T.R.1
Sibley, C.D.2
Parkins, M.D.3
Rabin, H.R.4
Surette, M.G.5
-
26
-
-
79952353786
-
Streptococcus mitis: walking the line between commensalism and pathogenesis
-
Mitchell J, (2011) Streptococcus mitis: walking the line between commensalism and pathogenesis. Mol Oral Microbiol 26: 89-98.
-
(2011)
Mol Oral Microbiol
, vol.26
, pp. 89-98
-
-
Mitchell, J.1
-
27
-
-
77949769229
-
The genome of Streptococcus mitis B6 - what is a commensal?
-
Denapaite D, Brückner R, Nuhn M, Reichmann P, Henrich B, et al. (2010) The genome of Streptococcus mitis B6- what is a commensal? PLoS One 5: e9426.
-
(2010)
PLoS One
, vol.5
-
-
Denapaite, D.1
Brückner, R.2
Nuhn, M.3
Reichmann, P.4
Henrich, B.5
-
28
-
-
67649158949
-
The immune response of oral epithelial cells induced by single-species and complex naturally formed biofilms
-
Eberhard J, Pietschmann R, Falk W, Jepsen S, Dommisch H, (2009) The immune response of oral epithelial cells induced by single-species and complex naturally formed biofilms. Oral Microbiol Immunol 24: 325-330.
-
(2009)
Oral Microbiol Immunol
, vol.24
, pp. 325-330
-
-
Eberhard, J.1
Pietschmann, R.2
Falk, W.3
Jepsen, S.4
Dommisch, H.5
-
29
-
-
84859967531
-
Complete genome and transcriptomes of Streptococcus parasanguinis FW213: phylogenic relations and potential virulence mechanisms
-
Geng J, Chiu CH, Tang P, Chen Y, Shieh HR, et al. (2012) Complete genome and transcriptomes of Streptococcus parasanguinis FW213: phylogenic relations and potential virulence mechanisms. PLoS One 7: e34769.
-
(2012)
PLoS One
, vol.7
-
-
Geng, J.1
Chiu, C.H.2
Tang, P.3
Chen, Y.4
Shieh, H.R.5
-
30
-
-
30744469396
-
Viridans streptococci isolated by culture from blood of cancer patients: clinical and microbiologic analysis of 50 cases
-
Han XY, Kamana M, Rolston KV, (2006) Viridans streptococci isolated by culture from blood of cancer patients: clinical and microbiologic analysis of 50 cases. J Clin Microbiol 44: 160-165.
-
(2006)
J Clin Microbiol
, vol.44
, pp. 160-165
-
-
Han, X.Y.1
Kamana, M.2
Rolston, K.V.3
-
31
-
-
77950251400
-
A human gut microbial gene catalogue established by metagenomic sequencing
-
Qin J, Li R, Raes J, Arumugam M, Burgdorf KS, et al. (2010) A human gut microbial gene catalogue established by metagenomic sequencing. Nature 464: 59-65.
-
(2010)
Nature
, vol.464
, pp. 59-65
-
-
Qin, J.1
Li, R.2
Raes, J.3
Arumugam, M.4
Burgdorf, K.S.5
-
32
-
-
0023198150
-
Characteristics and sites of infection of Eubacterium nodatum, Eubacterium timidum, Eubacterium brachy, and other asaccharolytic eubacteria
-
Hill GB, Ayers OM, Kohan AP, (1987) Characteristics and sites of infection of Eubacterium nodatum, Eubacterium timidum, Eubacterium brachy, and other asaccharolytic eubacteria. J Clin Microbiol 25: 1540-1545.
-
(1987)
J Clin Microbiol
, vol.25
, pp. 1540-1545
-
-
Hill, G.B.1
Ayers, O.M.2
Kohan, A.P.3
-
33
-
-
5444269195
-
Oribacterium sinus gen. nov., sp. nov., within the family 'Lachnospiraceae' (phylum Firmicutes)
-
Carlier JP, K'ouas G, Bonne I, Lozniewski A, Mory F, (2004) Oribacterium sinus gen. nov., sp. nov., within the family 'Lachnospiraceae' (phylum Firmicutes). Int J Syst Evol Microbiol 54: 1611-1615.
-
(2004)
Int J Syst Evol Microbiol
, vol.54
, pp. 1611-1615
-
-
Carlier, J.P.1
K'ouas, G.2
Bonne, I.3
Lozniewski, A.4
Mory, F.5
-
34
-
-
34248194876
-
Moryella indoligenes gen. nov., sp. nov., an anaerobic bacterium isolated from clinical specimens
-
Carlier JP, K'ouas G, Han XY, (2007) Moryella indoligenes gen. nov., sp. nov., an anaerobic bacterium isolated from clinical specimens. Int J Syst Evol Microbiol 57: 725-729.
-
(2007)
Int J Syst Evol Microbiol
, vol.57
, pp. 725-729
-
-
Carlier, J.P.1
K'ouas, G.2
Han, X.Y.3
-
35
-
-
23744444851
-
Properties of hemagglutination by Prevotella melaninogenica
-
Haraldsson G, Meurman JH, Könönen E, Holbrook WP, (2005) Properties of hemagglutination by Prevotella melaninogenica. Anaerobe 11: 285-289.
-
(2005)
Anaerobe
, vol.11
, pp. 285-289
-
-
Haraldsson, G.1
Meurman, J.H.2
Könönen, E.3
Holbrook, W.P.4
-
36
-
-
84861753753
-
Lactobacillus crispatus M206119 exacerbates murine DSS-colitis by interfering with inflammatory responses
-
Zhou FX, Chen L, Liu XW, Ouyang CH, Wu XP, et al. (2012) Lactobacillus crispatus M206119 exacerbates murine DSS-colitis by interfering with inflammatory responses. World J Gastroenterol 18: 2344-2356.
-
(2012)
World J Gastroenterol
, vol.18
, pp. 2344-2356
-
-
Zhou, F.X.1
Chen, L.2
Liu, X.W.3
Ouyang, C.H.4
Wu, X.P.5
-
37
-
-
0028270164
-
Intervertebral infection caused by Streptococcus milleri. A case report
-
Jacobs JA, Pietersen HG, Walenkamp GH, Stobberingh EE, Soeters PB, (1994) Intervertebral infection caused by Streptococcus milleri. A case report. Clin Orthop Relat Res 302: 183-188.
-
(1994)
Clin Orthop Relat Res
, vol.302
, pp. 183-188
-
-
Jacobs, J.A.1
Pietersen, H.G.2
Walenkamp, G.H.3
Stobberingh, E.E.4
Soeters, P.B.5
-
38
-
-
60849132184
-
Co-infection by Streptococcus anginosus and Mycobacterium tuberculosis: three case reports
-
Rabuñal R, Corredoira J, Monte R, Coira A, (2009) Co-infection by Streptococcus anginosus and Mycobacterium tuberculosis: three case reports. J Med Case Rep 3: 37.
-
(2009)
J Med Case Rep
, vol.3
, pp. 37
-
-
Rabuñal, R.1
Corredoira, J.2
Monte, R.3
Coira, A.4
-
39
-
-
0033390409
-
Reclassification of Peptostreptococcus magnus (Prevot 1933) Holdeman and Moore 1972 as Finegoldia magna comb. nov. and Peptostreptococcus micros (Prevot 1933) Smith 1957 as Micromonas micros comb. nov
-
Murdoch DA, Shah HN, (1999) Reclassification of Peptostreptococcus magnus (Prevot 1933) Holdeman and Moore 1972 as Finegoldia magna comb. nov. and Peptostreptococcus micros (Prevot 1933) Smith 1957 as Micromonas micros comb. nov. Anaerobe 5: 555-559.
-
(1999)
Anaerobe
, vol.5
, pp. 555-559
-
-
Murdoch, D.A.1
Shah, H.N.2
-
40
-
-
2342442430
-
Reduction in diversity of the colonic mucosa associated bacterial microflora in patients with active inflammatory bowel disease
-
Ott SJ, Musfeldt M, Wenderoth DF, Hampe J, Brant O, et al. (2004) Reduction in diversity of the colonic mucosa associated bacterial microflora in patients with active inflammatory bowel disease. Gut 53: 685-93.
-
(2004)
Gut
, vol.53
, pp. 685-693
-
-
Ott, S.J.1
Musfeldt, M.2
Wenderoth, D.F.3
Hampe, J.4
Brant, O.5
-
41
-
-
79551495183
-
Airway microbiota and bronchial hyperresponsiveness in patients with suboptimally controlled asthma
-
Huang YJ, Nelson CE, Brodie EL, Desantis TZ, Baek MS, et al. (2011) Airway microbiota and bronchial hyperresponsiveness in patients with suboptimally controlled asthma. J Allergy Clin Immunol 127: 372-381.
-
(2011)
J Allergy Clin Immunol
, vol.127
, pp. 372-381
-
-
Huang, Y.J.1
Nelson, C.E.2
Brodie, E.L.3
Desantis, T.Z.4
Baek, M.S.5
-
42
-
-
44649129135
-
Commensals, bacterial pathogens and intestinal inflammation: an intriguing ménage à trois
-
Pédron T, Sansonetti P, (2008) Commensals, bacterial pathogens and intestinal inflammation: an intriguing ménage à trois. Cell Host Microbe 3: 344-347.
-
(2008)
Cell Host Microbe
, vol.3
, pp. 344-347
-
-
Pédron, T.1
Sansonetti, P.2
-
43
-
-
40349113425
-
The macaque gut microbiome in health, lentiviral infection, and chronic enterocolitis
-
McKenna P, Hoffmann C, Minkah N, Aye PP, Lackner A, et al. (2008) The macaque gut microbiome in health, lentiviral infection, and chronic enterocolitis. PLoS Pathog 4: e20.
-
(2008)
PLoS Pathog
, vol.4
-
-
McKenna, P.1
Hoffmann, C.2
Minkah, N.3
Aye, P.P.4
Lackner, A.5
-
44
-
-
77952243141
-
QIIME allows analysis of high-throughput community sequencing data
-
Caporaso JG, Kuczynski J, Stombaugh J, Bittinger K, Bushman FD, et al. (2010) QIIME allows analysis of high-throughput community sequencing data. Nat Methods 7: 335-336.
-
(2010)
Nat Methods
, vol.7
, pp. 335-336
-
-
Caporaso, J.G.1
Kuczynski, J.2
Stombaugh, J.3
Bittinger, K.4
Bushman, F.D.5
-
45
-
-
34548293679
-
Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
-
Wang Q, Garrity GM, Tiedje JM, Cole JR, (2007) Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Appl Environ Microbiol 73: 5261-5267.
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 5261-5267
-
-
Wang, Q.1
Garrity, G.M.2
Tiedje, J.M.3
Cole, J.R.4
-
46
-
-
33746061683
-
Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB
-
DeSantis TZ, Hugenholtz P, Larsen N, Rojas M, Brodie EL, et al. (2006) Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB. Appl Environ Microbiol 72: 5069-5072.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 5069-5072
-
-
DeSantis, T.Z.1
Hugenholtz, P.2
Larsen, N.3
Rojas, M.4
Brodie, E.L.5
-
47
-
-
29144464937
-
UniFrac: a new phylogenetic method for comparing microbial communities
-
Lozupone C, Knight R, (2005) UniFrac: a new phylogenetic method for comparing microbial communities. Appl Environ Microbiol 71: 8228-8235.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 8228-8235
-
-
Lozupone, C.1
Knight, R.2
|