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Volumn 13, Issue 1, 2012, Pages

OSAT: A tool for sample-to-batch allocations in genomics experiments

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; AUTOMATION; BATCH PROCESS; BIOCONDUCTOR; CONDUCTOR; CONTROLLED STUDY; DATA ANALYSIS SOFTWARE; GENOMICS; INFORMATION RETRIEVAL; MATHEMATICAL COMPUTING; PROCESS DEVELOPMENT; SAMPLING;

EID: 84872508256     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-13-689     Document Type: Article
Times cited : (43)

References (13)
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    • Learning from our GWAS mistakes: from experimental design to scientific method
    • Lambert CG, Black LJ. Learning from our GWAS mistakes: from experimental design to scientific method. Biostat(Oxford, England) 2012, 13(2):195.
    • (2012) Biostat(Oxford, England) , vol.13 , Issue.2 , pp. 195
    • Lambert, C.G.1    Black, L.J.2
  • 2
    • 41949101394 scopus 로고    scopus 로고
    • Run batch effects potentially compromise the usefulness of genomic signatures for ovarian cancer
    • 10.1200/JCO.2007.15.1951, 18309960
    • Baggerly KA, Coombes KR, Neeley ES. Run batch effects potentially compromise the usefulness of genomic signatures for ovarian cancer. J Clin Oncol 2008, 26(7):1186. 10.1200/JCO.2007.15.1951, 18309960.
    • (2008) J Clin Oncol , vol.26 , Issue.7 , pp. 1186
    • Baggerly, K.A.1    Coombes, K.R.2    Neeley, E.S.3
  • 5
    • 81255160933 scopus 로고    scopus 로고
    • The importance of new statistical methods for high-throughput sequencing
    • 10.1038/nbt.1831, 21478851
    • Mak HC, Storey J. The importance of new statistical methods for high-throughput sequencing. Nat Biotechnol 2011, 29(4):331. 10.1038/nbt.1831, 21478851.
    • (2011) Nat Biotechnol , vol.29 , Issue.4 , pp. 331
    • Mak, H.C.1    Storey, J.2
  • 9
    • 84859783155 scopus 로고    scopus 로고
    • R/DWD: Distance-Weighted Discrimination for classification, visualization and batch adjustment
    • 10.1093/bioinformatics/bts096, 22368246
    • Huang H, Lu X, Liu Y, Haaland P, Marron JS. R/DWD: Distance-Weighted Discrimination for classification, visualization and batch adjustment. Bioinformatics 2012, 28(8):1182. 10.1093/bioinformatics/bts096, 22368246.
    • (2012) Bioinformatics , vol.28 , Issue.8 , pp. 1182
    • Huang, H.1    Lu, X.2    Liu, Y.3    Haaland, P.4    Marron, J.S.5
  • 11
    • 33845432928 scopus 로고    scopus 로고
    • Adjusting batch effects in microarray expression data using empirical Bayesmethods
    • 10.1093/biostatistics/kxj037, 16632515
    • Li C, Rabinovic A. Adjusting batch effects in microarray expression data using empirical Bayesmethods. Biostatistics 2007, 8:118. 10.1093/biostatistics/kxj037, 16632515.
    • (2007) Biostatistics , vol.8 , pp. 118
    • Li, C.1    Rabinovic, A.2
  • 12
    • 0033425756 scopus 로고    scopus 로고
    • A new approach in constructing orthogonal and nearly orthogonal arrays
    • Ma C, Fang K, Liski E. A new approach in constructing orthogonal and nearly orthogonal arrays. Metrika 2000, 50(3):255.
    • (2000) Metrika , vol.50 , Issue.3 , pp. 255
    • Ma, C.1    Fang, K.2    Liski, E.3
  • 13
    • 79952230540 scopus 로고    scopus 로고
    • Removing batch effects inanalysis of expression microarray data: an evaluation of six batch adjustment methods
    • 10.1371/journal.pone.0017238, 3046121, 21386892
    • Chen C, Grennan K, Badner J, Zhang D, Gershon E, Jin L, Liu C. Removing batch effects inanalysis of expression microarray data: an evaluation of six batch adjustment methods. PLoS One 2011, 6(2):e17238. 10.1371/journal.pone.0017238, 3046121, 21386892.
    • (2011) PLoS One , vol.6 , Issue.2
    • Chen, C.1    Grennan, K.2    Badner, J.3    Zhang, D.4    Gershon, E.5    Jin, L.6    Liu, C.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.