Identifying transcriptional miRNA biomarkers by integrating high-throughput sequencing and real-time PCR data

Methods

Volumn 59, Issue 1, 2013, Pages 154-163

  Rahmann, Sven ^a,c   Martin, Marcel ^a   Schulte, Johannes H ^b   Köster, Johannes ^a,c   Marschall, Tobias ^d   Schramm, Alexander ^a,b  

^a TU DORTMUND UNIVERSITY   (Germany)

^b UNIVERSITY HOSPITAL ESSEN   (Germany)

^c UNIVERSITY OF DUISBURG ESSEN   (Germany)

^d CWI   (Netherlands)

Author keywords

Biomarker identification; High throughput sequencing; MiRNA; Normalization; Read mapping; RT qPCR

Indexed keywords

BIOLOGICAL MARKER; MICRORNA; TRANSCRIPTOME;

ARTICLE; AUTOMATION; BIOINFORMATICS; CANCER SURVIVAL; COMPUTER PROGRAM; EVENT FREE SURVIVAL; GENE EXPRESSION PROFILING; GENE MAPPING; GENETIC TRANSCRIPTION; HIGH THROUGHPUT SEQUENCING; HUMAN GENOME; NEUROBLASTOMA; PRIORITY JOURNAL; REAL TIME POLYMERASE CHAIN REACTION;

ALGORITHMS; CHROMOSOME MAPPING; DATABASES, GENETIC; GENE EXPRESSION PROFILING; GENOME, HUMAN; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; HUMANS; MICRORNAS; NEUROBLASTOMA; QUALITY CONTROL; REAL-TIME POLYMERASE CHAIN REACTION; REFERENCE STANDARDS; SEQUENCE HOMOLOGY, NUCLEIC ACID; SOFTWARE; TUMOR MARKERS, BIOLOGICAL;

EID: 84872198140     PISSN: 10462023     EISSN: 10959130     Source Type: Journal    
DOI: 10.1016/j.ymeth.2012.10.005     Document Type: Article

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