TAF7: Traffic controller in transcription initiation

Transcription

Volumn 4, Issue 1, 2013, Pages 29-33

  Gegonne, Anne ^a   Devaiah, Ballachanda N ^a   Singer, Dinah S ^a  

^a NATIONAL CANCER INSTITUTE   (United States)

Author keywords

Differentiation; Proliferation; T cells; TAF7; Transcriptional regulation

Indexed keywords

CD4 ANTIGEN; CD69 ANTIGEN; CD8 ANTIGEN; CYCLIN A; CYCLIN D; CYCLIN DEPENDENT KINASE 7; DNA; MAJOR HISTOCOMPATIBILITY ANTIGEN CLASS 1; PROTEIN BCL 2; RNA POLYMERASE II; T LYMPHOCYTE RECEPTOR BETA CHAIN; TATA BINDING PROTEIN ASSOCIATED FACTOR 1; TATA BINDING PROTEIN ASSOCIATED FACTOR 7; TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR IID; UNCLASSIFIED DRUG;

ARTICLE; CELL DIFFERENTIATION; CELL MATURATION; CELL PROLIFERATION; DNA TRANSCRIPTION; GENE DELETION; GENE EXPRESSION; GENETIC TRANSCRIPTION; HUMAN; NONHUMAN; PROTEIN FUNCTION; PROTEIN PROTEIN INTERACTION; T LYMPHOCYTE; THYMOCYTE; TRANSCRIPTION INITIATION;

EID: 84872180660     PISSN: 21541264     EISSN: 21541272     Source Type: Journal    
DOI: 10.4161/trns.22842     Document Type: Article

References (28)

1. Thomas MC, Chiang CM. The general transcription machinery and general cofactors. Crit Rev Biochem Mol Biol 2006; 41:105-78; PMID:16858867; http://dx.doi.org/10.1080/10409230600648736.
2. Conaway RC, Conaway JW. Function and regulation of the Mediator complex. Curr Opin Genet Dev 2011; 21:225-30; PMID:21330129; http://dx.doi.org/10.1016/j.gde.2011.01.013.
3. Taatjes DJ. The human Mediator complex: a versatile, genome-wide regulator of transcription. Trends Biochem Sci 2010; 35:315-22; PMID:20299225; http://dx.doi.org/10.1016/j.tibs.2010.02.004.
4. Dey A, Nishiyama A, Karpova T, McNally J, Ozato K. Brd4 marks select genes on mitotic chromatin and directs postmitotic transcription. Mol Biol Cell 2009; 20:4899-909; PMID:19812244; http://dx.doi.org/10.1091/mbc.E09-05-0380.
5. Devaiah BN, Lewis BA, Cherman N, Hewitt MC, Albrecht BK, Robey PG, et al. BRD4 is an atypical kinase that phosphorylates serine2 of the RNA polymerase II carboxy-terminal domain. Proc Natl Acad Sci U S A 2012; 109:6927-32; PMID:22509028; http://dx.doi.org/10.1073/pnas.1120422109.
6. Egloff S, Dienstbier M, Murphy S. Updating the RNA polymerase CTD code: adding gene-specific layers. Trends Genet 2012; 28:333-41; PMID:22622228; http://dx.doi.org/10.1016/j.tig.2012.03.007.
7. Hsin JP, Manley JL. The RNA polymerase II CTD coordinates transcription and RNA processing. Genes Dev 2012; 26:2119-37; PMID:23028141; http://dx.doi.org/10.1101/gad.200303.112.
8. Cler E, Papai G, Schultz P, Davidson I. Recent advances in understanding the structure and function of general transcription factor TFIID. Cell Mol Life Sci 2009; 66:2123-34; PMID:19308322; http://dx.doi.org/10.1007/s00018-009-0009-3.
9. D'Alessio JA, Wright KJ, Tjian R. Shifting players and paradigms in cell-specific transcription. Mol Cell 2009; 36:924-31; PMID:20064459; http://dx.doi.org/10.1016/j.molcel.2009.12.011.
10. Müller F, Zaucker A, Tora L. Developmental regulation of transcription initiation: more than just changing the actors. Curr Opin Genet Dev 2010; 20:533-40; PMID:20598874; http://dx.doi.org/10.1016/j.gde.2010.06.004.
11. Dikstein R, Ruppert S, Tjian R. TAFII250 is a bipartite protein kinase that phosphorylates the base transcription factor RAP74. Cell 1996; 84:781-90; PMID:8625415; http://dx.doi.org/10.1016/S0092-8674(00)81055-7.
12. Mizzen CA, Yang XJ, Kokubo T, Brownell JE, Bannister AJ, Owen-Hughes T, et al. The TAF(II)250 subunit of TFIID has histone acetyltransferase activity. Cell 1996; 87:1261-70; PMID:8980232; http://dx.doi.org/10.1016/S0092-8674(00)81821-8.
13. Gegonne A, Weissman JD, Zhou M, Brady JN, Singer DS. TAF7: a possible transcription initiation check-point regulator. Proc Natl Acad Sci U S A 2006; 103:602-7; PMID:16407123; http://dx.doi.org/10.1073/pnas.0510031103.
14. Dunphy EL, Johnson T, Auerbach SS, Wang EH. Requirement for TAF(II)250 acetyltransferase activity in cell cycle progression. Mol Cell Biol 2000; 20:1134-9; PMID:10648598; http://dx.doi.org/10.1128/MCB.20.4.1134-1139.2000.
15. Hilton TL, Li Y, Dunphy EL, Wang EH. TAF1 histone acetyltransferase activity in Sp1 activation of the cyclin D1 promoter. Mol Cell Biol 2005; 25:4321-32; PMID:15870300; http://dx.doi.org/10.1128/MCB.25.10.4321-4332.2005.
16. Weissman JD, Howcroft TK, Singer DS. TAF(II)250-independent transcription can be conferred on a TAF(II)250-dependent basal promoter by upstream activators. J Biol Chem 2000; 275:10160-7; PMID:10744699; http://dx.doi.org/10.1074/jbc.275.14.10160.
17. Gegonne A, Weissman JD, Singer DS. TAFII55 binding to TAFII250 inhibits its acetyltransferase activity. Proc Natl Acad Sci U S A 2001; 98:12432-7; PMID:11592977; http://dx.doi.org/10.1073/pnas.211444798.
18. Kloet SL, Whiting JL, Gafken P, Ranish J, Wang EH. Phosphorylation-dependent regulation of cyclin D1 and cyclin A gene transcription by TFIID subunits TAF1 and TAF7. Mol Cell Biol 2012; 32:3358-69; PMID:22711989; http://dx.doi.org/10.1128/MCB.00416-12.
19. Devaiah BN, Lu H, Gegonne A, Sercan Z, Zhang H, Clifford RJ, et al. Novel functions for TAF7, a regulator of TAF1-independent transcription. J Biol Chem 2010; 285:38772-80; PMID:20937824; http://dx.doi.org/10.1074/jbc.M110.173864.
20. Shen WC, Bhaumik SR, Causton HC, Simon I, Zhu X, Jennings EG, et al. Systematic analysis of essential yeast TAFs in genome-wide transcription and preinitiation complex assembly. EMBO J 2003; 22:3395-402; PMID:12840001; http://dx.doi.org/10.1093/emboj/cdg336.
21. Raval A, Howcroft TK, Weissman JD, Kirshner S, Zhu XS, Yokoyama K, et al. Transcriptional coactivator, CIITA, is an acetyltransferase that bypasses a promoter requirement for TAF(II)250. Mol Cell 2001; 7:105-15; PMID:11172716; http://dx.doi.org/10.1016/S1097-2765(01)00159-9.
22. Gegonne A, Weissman JD, Lu H, Zhou M, Dasgupta A, Ribble R, et al. TFIID component TAF7 functionally interacts with both TFIIH and P-TEFb. Proc Natl Acad Sci U S A 2008; 105:5367-72; PMID:18391197; http://dx.doi.org/10.1073/pnas.0801637105.
23. Yamada T, Yamaguchi Y, Inukai N, Okamoto S, Mura T, Handa H. P-TEFb-mediated phosphorylation of hSpt5 C-terminal repeats is critical for processive transcription elongation. Mol Cell 2006; 21:227-37; PMID:16427012; http://dx.doi.org/10.1016/j.molcel.2005.11.024.
24. Devaiah BN, Singer DS. Cross-talk among RNA Polymerase II kinases modulates C-terminal domain phosphorylation. J Biol Chem 2012; 287:38755-66; PMID:23027873; http://dx.doi.org/10.1074/jbc.M112.412015.
25. Bosselut R. CD4/CD8-lineage differentiation in the thymus: from nuclear effectors to membrane signals. Nat Rev Immunol 2004; 4:529-40; PMID:15229472; http://dx.doi.org/10.1038/nri1392.
26. Gegonne A, Tai X, Zhang J, Wu G, Zhu J, Yoshimoto A, et al. The general transcription factor TAF7 is essential for embryonic development but not essential for the survival or differentiation of mature T cells. Mol Cell Biol 2012; 32:1984-97; PMID:22411629; http://dx.doi.org/10.1128/MCB.06305-11.
27. Hayashida T, Sekiguchi T, Noguchi E, Sunamoto H, Ohba T, Nishimoto T. The CCG1/TAFII250 gene is mutated in thermosensitive G1 mutants of the BHK21 cell line derived from golden hamster. Gene 1994; 141:267-70; PMID:8163200; http://dx.doi.org/10.1016/0378-1119(94)90583-5.
28. Mochizuki K, Nishiyama A, Jang MK, Dey A, Ghosh A, Tamura T, et al. The bromodomain protein Brd4 stimulates G1 gene transcription and promotes progression to S phase. J Biol Chem 2008; 283:9040-8; PMID:18223296; http://dx.doi.org/10.1074/jbc.M707603200.