Photolysis of caged compounds: Studying Ca2+ signaling and activation of Ca2+-dependent ion channels

Cold Spring Harbor Protocols

Volumn 8, Issue 1, 2013, Pages 8-11

  Almassy, Janos ^a   Yule, David I ^a  

^a UNIVERSITY OF ROCHESTER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CALCIUM; ESTER DERIVATIVE; ION CHANNEL; CALCIUM DERIVATIVE;

ARTICLE; CALCIUM CELL LEVEL; CALCIUM SIGNALING; CHEMICAL MODIFICATION; CHROMATOPHORE; EXOCYTOSIS; LIGHT; MICROINJECTION; PATCH CLAMP; PHOTOACTIVATION; PHOTOLYSIS; PHYSIOLOGICAL PROCESS; PROTEIN LOCALIZATION; SECOND MESSENGER; ULTRAVIOLET RADIATION; CYTOLOGY; METABOLISM; METHODOLOGY; RADIATION EXPOSURE; SIGNAL TRANSDUCTION;

CALCIUM COMPOUNDS; CYTOLOGICAL TECHNIQUES; ION CHANNELS; PHOTOLYSIS; SIGNAL TRANSDUCTION; ULTRAVIOLET RAYS;

EID: 84871960906     PISSN: 19403402     EISSN: 15596095     Source Type: Journal    
DOI: 10.1101/pdb.top066076     Document Type: Article

References (40)

1. Abramov AY, Duchen MR. 2011. Measurements of threshold of mitochondrial permeability transition pore opening in intact and permeabilized cells by flash photolysis of caged calcium. Methods Mol Biol 793: 299-309.
2. Almassy J, Yule DI. 2013a. Studying the activation of epithelial ion channels using global whole-field photolysis. Cold Spring Harb Protoc doi: 10.1101/pdb.prot072751.
3. 2+ imaging, and patch clamp recording. Cold Spring Harb Protoc doi: 10.1101/pdb.prot072769.
4. 2+ dynamics in intact epithelial cells using spatially limited flash photolysis. Cold Spring Harb Protoc doi: 10.1101/pdb.prot072777.
5. 2+-activated potassium channels in mouse parotid acinar cells. J Gen Physiol 139: 121-133.
6. 2+ waves. J Cell Biol 158: 283-292.
7. Beutner G, Sharma VK, Giovannucci DR, Yule DI, Sheu SS. 2001. Identification of a ryanodine receptor in rat heart mitochondria. J Biol Chem 276: 21482-21488.
8. Chen Y, Warner JD, Yule DI, Giovannucci DR. 2005. Spatiotemporal analysis of exocytosis in mouse parotid acinar cells. Am J Physiol Cell Physiol 289: C1209-C1219.
9. Cruz JC, Thomas M, Wong E, Ohgami N, Sugii S, Curphey T, Chang CC, Chang TY. 2002. Synthesis and biochemical properties of a new photoactivatable cholesterol analog 7,7-azocholestanol and its linoleate ester in Chinese hamster ovary cell lines. J Lipid Res 43: 1341-1347.
10. Ellis-Davies GC. 2003. Development and application of caged calcium. Methods Enzymol 360: 226-238.
11. Ellis-Davies GC. 2007. Caged compounds: Photorelease technology for control of cellular chemistry and physiology. Nat Methods 4: 619-628.
12. Engels J, Schlaeger EJ. 1977. Synthesis, structure, and reactivity of adenosine cyclic 3',5'-phosphate benzyl triesters. J Medicinal Chem 20: 907-911.
13. Figueroa L, Shkryl VM, Zhou J, Manno C, Momotake A, Brum G, Blatter LA, Ellis-Davies GC, Rios E. 2012. Synthetic localized calcium transients directly probe signalling mechanisms in skeletal muscle. J Physiol 590: 1389-1411.
14. 2+ signals in mouse pancreatic acinar cells. J Physiol 526 (Pt 3): 515-526.
15. + current in primary vagal sensory neurons. J Neurophysiol 91: 2344-2352.
16. Kaplan JH, Ellis-Davies GC. 1988. Photolabile chelators for the rapid photorelease of divalent cations. Proc Natl Acad Sci (USA) 85: 6571-6575.
17. Kaplan JH, Forbush B, Hoffman JF. 1978. Rapid photolytic release of adenosine 5'-triphosphate from a protected analogue: utilization by the Na: K pump of human red blood cell ghosts. Biochem 17: 1929-1935.
18. 2+ regulation of nicotinic acetylcholine receptor channels in rat hippocampal CA1 neurons. J Neurosci 23: 9024-9031.
19. Leybaert L, Sanderson MJ. 2001. Intercellular calcium signaling and flash photolysis of caged compounds. A sensitive method to evaluate gap junctional coupling. Methods Mol Biol 154: 407-430.
20. 2+ spike frequency can optimize gene expression. Nature 392: 936-941.
21. Mayer G, Heckel A. 2006. Biologically active molecules with a light switch. Angew Chem Int Ed Engl 45: 4900-4921.
22. Milburn T, Matsubara N, Billington AP, Udgaonkar JB, Walker JW, Carpenter BK, Webb WW, Marque J, Denk W, McCray JA, et al. 1989. Synthesis, photochemistry, and biological activity of a caged photolabile acetylcholine receptor ligand. Biochem 28: 49-55.
23. Momotake A, Lindegger N, Niggli E, Barsotti RJ, Ellis-Davies GC. 2006. The nitrodibenzofuran chromophore: A new caging group for ultra-efficient photolysis in living cells. Nat Methods 3: 35-40.
24. Monroe WT, McQuain MM, Chang MS, Alexander JS, Haselton FR. 1999. Targeting expression with light using caged DNA. J Biol Chem 274: 20895-20900.
25. Neher E, Zucker RS. 1993. Multiple calcium-dependent processes related to secretion in bovine chromaffin cells. Neuron 10: 21-30.
26. Noguchi J, Nagaoka A, Watanabe S, Ellis-Davies GC, Kitamura K, Kano M, Matsuzaki M, Kasai H. 2011. In vivo two-photon uncaging of glutamate revealing the structure-function relationships of dendritic spines in the neocortex of adult mice. J Physiol 589: 2447-2457.
27. Park MK, Lomax RB, Tepikin AV, Petersen OH. 2001. Local uncaging of caged Ca(2+) reveals distribution of Ca(2+)-activated Cl(-) channels in pancreatic acinar cells. Proc Natl Acad Sci (USA) 98: 10948-10953.
28. Pelliccioli AP, Wirz J. 2002. Photoremovable protecting groups: reaction mechanisms and applications. Photochem Photobiol Sci 1: 441-458.
29. Sidky AO, Baimbridge KG. 1997. Calcium homeostatic mechanisms operating in cultured postnatal rat hippocampal neurones following flash photolysis of nitrophenyl-EGTA. J Physiol 504 (Pt 3): 579-590.
30. Sneyd J, Tsaneva-Atanasova K, Reznikov V, Bai Y, Sanderson MJ, Yule DI. 2006. A method for determining the dependence of calcium oscillations on inositol trisphosphate oscillations. Proc Natl Acad Sci (USA) 103: 1675-1680.
31. 2+ signalling events in Xenopus oocytes. J Physiol 509 (Pt 1): 67-80.
32. 2+-dependent exocytosis in pancreatic beta cells. Proc Natl Acad Sci (USA) 96: 760-765.
33. Takeuchi H, Kurahashi T. 2002. Photolysis of caged cyclic AMP in the ciliary cytoplasm of the newt olfactory receptor cell. J Physiol 541: 825-833.
34. Tong Y, Brandt GS, Li M, Shapovalov G, Slimko E, Karschin A, Dougherty DA, Lester HA. 2001. Tyrosine decaging leads to substantial membrane trafficking during modulation of an inward rectifier potassium channel. J Gen Physiol 117: 103-118.
35. Tsien RY. 1988. Fluorescence measurement and photochemical manipulation of cytosolic free calcium. Trends Neurosci 11: 419-424.
36. Walker JW, Somlyo AV, Goldman YE, Somlyo AP, Trentham DR. 1987. Kinetics of smooth and skeletal muscle activation by laser pulse photolysis of caged inositol 1,4,5-trisphosphate. Nature 327: 249-252.
37. Wieboldt R, Gee KR, Niu L, Ramesh D, Carpenter BK, Hess GP. 1994a. Photolabile precursors of glutamate: Synthesis, photochemical properties, and activation of glutamate receptors on a microsecond time scale. Proc Natl Acad Sci (USA) 91: 8752-8756.
38. Wieboldt R, Ramesh D, Carpenter BK, Hess GP. 1994b. Synthesis and photochemistry of photolabile derivatives of gamma-aminobutyric acid for chemical kinetic investigations of the gamma-aminobutyric acid receptor in the millisecond time region. Biochem 33: 1526-1533.
39. 2+ release dynamics in parotid and pancreatic exocrine acinar cells evoked by spatially limited flash photolysis. Am J Physiol 293: G1166-G1177.
40. Yip KP. 2005. Flash photolysis of caged nitric oxide inhibits proximal tubular fluid reabsorption in free-flow nephron. Am J Physiol Regul Integr Comp Physiol 289: R620-R626.