-
1
-
-
80052445604
-
Functional genomics analysis of plant growth-promoting rhizobacterial traits involved in rhizosphere competence
-
Barret M, Morrissey JP, O'Gara F (2011) Functional genomics analysis of plant growth-promoting rhizobacterial traits involved in rhizosphere competence. Biol Fertil Soils 47: 729-743.
-
(2011)
Biol Fertil Soils
, vol.47
, pp. 729-743
-
-
Barret, M.1
Morrissey, J.P.2
O'Gara, F.3
-
2
-
-
77950576590
-
Long-term phosphorus fertilization impacts soil fungal and bacterial diversity but not AM fungal community in alfalfa
-
Beauregard MS, Hamel C, Atul-Nayyar St-Arnaud M (2010) Long-term phosphorus fertilization impacts soil fungal and bacterial diversity but not AM fungal community in alfalfa. Microb Ecol 59: 379-389.
-
(2010)
Microb Ecol
, vol.59
, pp. 379-389
-
-
Beauregard, M.S.1
Hamel, C.2
Atul-Nayyar St-Arnaud M3
-
3
-
-
38549164691
-
GenBank
-
Benson DA, Karsch-Mizrachi I, Lipman DJ, Ostell J, Wheeler DL (2008) GenBank. Nucleic Acids Res 36: 25-30.
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 25-30
-
-
Benson, D.A.1
Karsch-Mizrachi, I.2
Lipman, D.J.3
Ostell, J.4
Wheeler, D.L.5
-
4
-
-
0027060097
-
Microbial numbers and activity in dried and rewetted arable soil under integrated and conventional management
-
Bloem J, Deruiter PC, Koopman GJ, Lebbink G, Brussaard L (1992) Microbial numbers and activity in dried and rewetted arable soil under integrated and conventional management. Soil Biol Biochem 24: 655-665.
-
(1992)
Soil Biol Biochem
, vol.24
, pp. 655-665
-
-
Bloem, J.1
Deruiter, P.C.2
Koopman, G.J.3
Lebbink, G.4
Brussaard, L.5
-
5
-
-
0031947934
-
Impacts of carbon and flooding on soil microbial communities: phospholipid fatty acid profiles and substrate utilization patterns
-
Bossio DA, Scow KM, Gunapala N, Graham KJ (1998a) Impacts of carbon and flooding on soil microbial communities: phospholipid fatty acid profiles and substrate utilization patterns. Microb Ecol 35: 265-278.
-
(1998)
Microb Ecol
, vol.35
, pp. 265-278
-
-
Bossio, D.A.1
Scow, K.M.2
Gunapala, N.3
Graham, K.J.4
-
6
-
-
0031864898
-
Determinants of soil microbial communities: effects of agricultural management season and soil type on phospholipid fatty acid profiles
-
Bossio DA, Scow KM, Gunapala N, Graham KJ (1998b) Determinants of soil microbial communities: effects of agricultural management season and soil type on phospholipid fatty acid profiles. Microb Ecol 36: 1-12.
-
(1998)
Microb Ecol
, vol.36
, pp. 1-12
-
-
Bossio, D.A.1
Scow, K.M.2
Gunapala, N.3
Graham, K.J.4
-
7
-
-
19944392939
-
Soil microbial community response to land use change in an agricultural landscape of western Kenya
-
Bossio DA, Girvan MS, Verchot L, Bullimore J, Borelli T, Albrecht A, Scow KM, Ball AS, Pretty JN, Osborn AM (2005) Soil microbial community response to land use change in an agricultural landscape of western Kenya. Microb Ecol 49: 50-62.
-
(2005)
Microb Ecol
, vol.49
, pp. 50-62
-
-
Bossio, D.A.1
Girvan, M.S.2
Verchot, L.3
Bullimore, J.4
Borelli, T.5
Albrecht, A.6
Scow, K.M.7
Ball, A.S.8
Pretty, J.N.9
Osborn, A.M.10
-
8
-
-
70149113459
-
Superior inorganic phosphate solubilization is linked to phylogeny within the Pseudomonas fluorescens complex
-
Browne P, Rice O, Miller SH, Burke J, Dowling DN, Morrissey JP, O'Gara F (2009) Superior inorganic phosphate solubilization is linked to phylogeny within the Pseudomonas fluorescens complex. Appl Soil Ecol 43: 131-138.
-
(2009)
Appl Soil Ecol
, vol.43
, pp. 131-138
-
-
Browne, P.1
Rice, O.2
Miller, S.H.3
Burke, J.4
Dowling, D.N.5
Morrissey, J.P.6
O'Gara, F.7
-
9
-
-
0003801060
-
Chemical analysis of agricultural materials
-
Byrne E (1979) Chemical analysis of agricultural materials. An Foras Taluntais Dublin.
-
(1979)
An Foras Taluntais Dublin
-
-
Byrne, E.1
-
10
-
-
0037445306
-
The impact of grassland management regime on the community structure of selected bacterial groups in soils
-
Clegg CD, Lovell RD, Hobbs PJ (2003) The impact of grassland management regime on the community structure of selected bacterial groups in soils. FEMS Microbiol Ecol 43: 263-270.
-
(2003)
FEMS Microbiol Ecol
, vol.43
, pp. 263-270
-
-
Clegg, C.D.1
Lovell, R.D.2
Hobbs, P.J.3
-
12
-
-
27944442453
-
Effects of organic versus conventional management on chemical and biological parameters in agricultural soils
-
Diepeningen AD, van Vos OJ, de Korthals GW, van Bruggen AHC (2006) Effects of organic versus conventional management on chemical and biological parameters in agricultural soils. Appl Soil Ecol 31: 120-135.
-
(2006)
Appl Soil Ecol
, vol.31
, pp. 120-135
-
-
Diepeningen, A.D.1
van Vos, O.J.2
de Korthals, G.W.3
van Bruggen, A.H.C.4
-
14
-
-
70449424669
-
-
Datasets Available At: Secure Archive For Environmental Research Data managed by Environmental Protection Agency Ireland, (Last Accessed: 2012-03-06)
-
Fay, D. Zhang, C (2012) "Towards a National Soil Database". Datasets Available At: Secure Archive For Environmental Research Data managed by Environmental Protection Agency Ireland http://erc. epa. ie/safer/resource?id=c265bb3f-2cec-102a-b1da-b128b41032cc (Last Accessed: 2012-03-06).
-
(2012)
Towards a National Soil Database
-
-
Fay, D.1
Zhang, C.2
-
15
-
-
4744340843
-
Microbial diversity in soil: selection microbial populations by plant and soil type and implications for disease suppressiveness
-
Garbeva P, van Veen JA, van Elsas JD (2004) Microbial diversity in soil: selection microbial populations by plant and soil type and implications for disease suppressiveness. Annu Rev Phytopathol 42: 243-70.
-
(2004)
Annu Rev Phytopathol
, vol.42
, pp. 243-270
-
-
Garbeva, P.1
van Veen, J.A.2
van Elsas, J.D.3
-
16
-
-
82955213939
-
Microbes and sustainable production of biofuel crops: a nitrogen perspective
-
Germaine KJ, Chhabra S, Song B, Brazil D, Dowling DN (2010) Microbes and sustainable production of biofuel crops: a nitrogen perspective. Biofuels 1(6): 877-888.
-
(2010)
Biofuels
, vol.1
, Issue.6
, pp. 877-888
-
-
Germaine, K.J.1
Chhabra, S.2
Song, B.3
Brazil, D.4
Dowling, D.N.5
-
17
-
-
0037338334
-
Soil type is the primary determinant of the composition of the total and active bacterial communities in arable soils
-
Girvan MS, Bullimore J, Pretty JN, Osborn AM, Ball AS (2003) Soil type is the primary determinant of the composition of the total and active bacterial communities in arable soils. Appl Environ Microbiol 69(3): 1800-1809.
-
(2003)
Appl Environ Microbiol
, vol.69
, Issue.3
, pp. 1800-1809
-
-
Girvan, M.S.1
Bullimore, J.2
Pretty, J.N.3
Osborn, A.M.4
Ball, A.S.5
-
18
-
-
2442654454
-
Responses of active bacterial and fungal communities in soils under winter wheat to different fertilizer and pesticide regimens
-
Girvan MS, Bullimore J, Ball AS, Pretty JN, Osborn AM (2004) Responses of active bacterial and fungal communities in soils under winter wheat to different fertilizer and pesticide regimens. Appl Environ Microbiol 70: 2692-2701.
-
(2004)
Appl Environ Microbiol
, vol.70
, pp. 2692-2701
-
-
Girvan, M.S.1
Bullimore, J.2
Ball, A.S.3
Pretty, J.N.4
Osborn, A.M.5
-
19
-
-
84871934879
-
Dynamics of soil microbial biomass and activity in conventional and organic farming systems
-
Gunapala N, Scow KM (1998) Dynamics of soil microbial biomass and activity in conventional and organic farming systems. Soil Biol Biochem 23: 507-513.
-
(1998)
Soil Biol Biochem
, vol.23
, pp. 507-513
-
-
Gunapala, N.1
Scow, K.M.2
-
20
-
-
0030739128
-
Analysis of actinomycete communities by specific amplification of genes encoding 16S rRNA and gel electrophoretic separation in denaturing gradients
-
Heuer H, Krsek M, Baker P, Smalla K, Wellington EM (1997) Analysis of actinomycete communities by specific amplification of genes encoding 16S rRNA and gel electrophoretic separation in denaturing gradients. Appl Environ Microbiol 63: 3233-3241.
-
(1997)
Appl Environ Microbiol
, vol.63
, pp. 3233-3241
-
-
Heuer, H.1
Krsek, M.2
Baker, P.3
Smalla, K.4
Wellington, E.M.5
-
21
-
-
24944533365
-
Nonmetric multidimensional scaling: a numerical method
-
Kruskal JB (1964) Nonmetric multidimensional scaling: a numerical method. Psychometrika 29: 115-129.
-
(1964)
Psychometrika
, vol.29
, pp. 115-129
-
-
Kruskal, J.B.1
-
22
-
-
83955164764
-
Role of phosphatase enzymes in soil
-
In Bunemann EK et al (Eds) Springer Verlag, Berlin Heidelberg
-
Nannipieri P, Giagnoni L, Landi L, Renella G (2011) Role of phosphatase enzymes in soil. In Bunemann EK et al (Eds) Phosphorus in action. Soil Biology 26 Springer Verlag, Berlin Heidelberg. Pp 215-241.
-
(2011)
Phosphorus in action. Soil Biology
, vol.26
, pp. 215-241
-
-
Nannipieri, P.1
Giagnoni, L.2
Landi, L.3
Renella, G.4
-
23
-
-
0034953840
-
Plants and fertilisers as drivers of change in microbial community structure and function in soils
-
O'Donnell AG, Seasman M, Macrae A, Waite I, Davies JT (2001) Plants and fertilisers as drivers of change in microbial community structure and function in soils. Plant Soil 232: 135-145.
-
(2001)
Plant Soil
, vol.232
, pp. 135-145
-
-
O'Donnell, A.G.1
Seasman, M.2
Macrae, A.3
Waite, I.4
Davies, J.T.5
-
24
-
-
0034965971
-
Soil microbial community responses to dairy manure or ammonium nitrate applications
-
Peacock AD, Mullen MD, Ringelberg DB, Tyler DD, Hedrick DB, Gale PM, White DC (2001) Soil microbial community responses to dairy manure or ammonium nitrate applications. Soil Biol Biochem 33: 1011-1019.
-
(2001)
Soil Biol Biochem
, vol.33
, pp. 1011-1019
-
-
Peacock, A.D.1
Mullen, M.D.2
Ringelberg, D.B.3
Tyler, D.D.4
Hedrick, D.B.5
Gale, P.M.6
White, D.C.7
-
25
-
-
0020640280
-
Secretion of ALP and phospholipase C in Pseudomonas aeruginosa is specific and does not involve an increase in outer membrane permeability
-
Poole K, Hancock REW (1983) Secretion of ALP and phospholipase C in Pseudomonas aeruginosa is specific and does not involve an increase in outer membrane permeability. FEMS Microbiol Lett 16: 25-29.
-
(1983)
FEMS Microbiol Lett
, vol.16
, pp. 25-29
-
-
Poole, K.1
Hancock, R.E.W.2
-
26
-
-
79955786692
-
Transforming U.S. Agriculture
-
Reganold JP, Jackson-Smith D, Batie SS, Harwood RR, Kornegay JL, Bucks D, Flora JC, Hanson CB, Jury WA, Meyer D, Schumacher A Jr, Sehmsdorf H, Shennan C, Thrupp LA, Willis P (2011) Transforming U. S. Agriculture. Science 332: 670-671.
-
(2011)
Science
, vol.332
, pp. 670-671
-
-
Reganold, J.P.1
Jackson-Smith, D.2
Batie, S.S.3
Harwood, R.R.4
Kornegay, J.L.5
Bucks, D.6
Flora, J.C.7
Hanson, C.B.8
Jury, W.A.9
Meyer, D.10
Schumacher Jr., A.11
Sehmsdorf, H.12
Shennan, C.13
Thrupp, L.A.14
Willis, P.15
-
27
-
-
33645241469
-
Phosphomonoesterase production and persistence and composition of bacterial communities during plant material decomposition in soils with different pH values
-
Renella G, Landi L, Ascher MT, Ceccherini G, Pietramellara G, Nannipieri P (2006) Phosphomonoesterase production and persistence and composition of bacterial communities during plant material decomposition in soils with different pH values. Soil Biol Biochem 38: 795-802.
-
(2006)
Soil Biol Biochem
, vol.38
, pp. 795-802
-
-
Renella, G.1
Landi, L.2
Ascher, M.T.3
Ceccherini, G.4
Pietramellara, G.5
Nannipieri, P.6
-
28
-
-
78651447492
-
Microbial and hydrolase activity after release of indoleacetic acid and ethylene-polyamine precursors by a model root surface
-
Renella G, Landi L, Garcia Mina JM, Giagnoni L, Nannipieri P (2011) Microbial and hydrolase activity after release of indoleacetic acid and ethylene-polyamine precursors by a model root surface. Appl Soil Ecol 47: 106-110.
-
(2011)
Appl Soil Ecol
, vol.47
, pp. 106-110
-
-
Renella, G.1
Landi, L.2
Garcia Mina, J.M.3
Giagnoni, L.4
Nannipieri, P.5
-
29
-
-
0024071275
-
Plant and microbial responses to sorghum-soybean cropping systems and fertility management
-
Roder W, Mason SC, Clegg MD, Doran JW, Kniep KR (1988) Plant and microbial responses to sorghum-soybean cropping systems and fertility management. Soil Sci Soc Am J 52: 1337-1342.
-
(1988)
Soil Sci Soc Am J
, vol.52
, pp. 1337-1342
-
-
Roder, W.1
Mason, S.C.2
Clegg, M.D.3
Doran, J.W.4
Kniep, K.R.5
-
30
-
-
0343593686
-
Phosphate solubilizing bacteria and their role in plant growth promotion
-
Rodriguez H, Fraga R (1999) Phosphate solubilizing bacteria and their role in plant growth promotion. Biotechnol Adv 17: 319-339.
-
(1999)
Biotechnol Adv
, vol.17
, pp. 319-339
-
-
Rodriguez, H.1
Fraga, R.2
-
31
-
-
0023375195
-
The neighbor-joining method: a new method for reconstructing phylogenetic trees
-
Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4: 406-425.
-
(1987)
Mol Biol Evol
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
32
-
-
38049073113
-
Analysis of bacterial communities on ALP genes in soil supplied with organic matter
-
Sakurai M, Wasaki J, Tomizawa Y, Shinano T, Osaki M (2008) Analysis of bacterial communities on ALP genes in soil supplied with organic matter. Soil Sci Plant Nutr 54: 62-71.
-
(2008)
Soil Sci Plant Nutr
, vol.54
, pp. 62-71
-
-
Sakurai, M.1
Wasaki, J.2
Tomizawa, Y.3
Shinano, T.4
Osaki, M.5
-
33
-
-
0001064107
-
Seasonal changes and the effects of fertiliser on some chemical biochemical and microbiological characteristics of high-producing pastoral soil
-
Sarathchandra S, Perrott K, Boase W, Je W (1988) Seasonal changes and the effects of fertiliser on some chemical biochemical and microbiological characteristics of high-producing pastoral soil. Biol Fertil Soils 6: 328-335.
-
(1988)
Biol Fertil Soils
, vol.6
, pp. 328-335
-
-
Sarathchandra, S.1
Perrott, K.2
Boase, W.3
Je, W.4
-
35
-
-
0021718004
-
Effect of phosphorus supply on phosphate uptake and alkaline phosphatase activity in Rhizobia
-
Smart J, Dilworth MJ, Robson AD (1984) Effect of phosphorus supply on phosphate uptake and alkaline phosphatase activity in Rhizobia. Arch Microbiol 140: 281-286.
-
(1984)
Arch Microbiol
, vol.140
, pp. 281-286
-
-
Smart, J.1
Dilworth, M.J.2
Robson, A.D.3
-
36
-
-
4243588067
-
The importance to sustainable agriculture of biodiversity among invertebrates and microorganisms
-
1st edn., D. L. Hawksworth (Ed.), UK: CABI
-
Stewart WD (1991) The importance to sustainable agriculture of biodiversity among invertebrates and microorganisms. In: Hawksworth DL (ed) The biodiversity of microorganisms and invertebrates: its role in sustainable agriculture, 1st edn. CABI, UK, pp 3-6.
-
(1991)
The Biodiversity of Microorganisms and Invertebrates: Its Role in Sustainable Agriculture
, pp. 3-6
-
-
Stewart, W.D.1
-
37
-
-
8144229009
-
Bacterial community structure and diversity in a century-old manure treated agroecosystem
-
Sun HY, Deng SP, Raun WR (2004) Bacterial community structure and diversity in a century-old manure treated agroecosystem. Appl Environ Microbiol 70: 5868-5874.
-
(2004)
Appl Environ Microbiol
, vol.70
, pp. 5868-5874
-
-
Sun, H.Y.1
Deng, S.P.2
Raun, W.R.3
-
38
-
-
34547781750
-
MEGA4: molecular mvolutionary genetics snalysis (MEGA) software version 4.0
-
Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: molecular mvolutionary genetics snalysis (MEGA) software version 4. 0. Mol Biol Evol 24: 1596-1599.
-
(2007)
Mol Biol Evol
, vol.24
, pp. 1596-1599
-
-
Tamura, K.1
Dudley, J.2
Nei, M.3
Kumar, S.4
-
39
-
-
47249122627
-
Community analysis of arbuscular mycorrhizal fungi and bacteria in the maize mycorrhizosphere in a long-term fertilization trial
-
Toljander JF, Santos-Gonzalez JC, Tehler A, Finlar RD (2008) Community analysis of arbuscular mycorrhizal fungi and bacteria in the maize mycorrhizosphere in a long-term fertilization trial. FEMS Microbiol Ecol 65: 323-338.
-
(2008)
FEMS Microbiol Ecol
, vol.65
, pp. 323-338
-
-
Toljander, J.F.1
Santos-Gonzalez, J.C.2
Tehler, A.3
Finlar, R.D.4
-
40
-
-
46549086294
-
Flavanoids of white lupin roots participate in phosphorus mobilisation from soil
-
Tomasi N, Weisskopf L, Renella G, Landi L, Pinton R, Varanini Z, Nannipieri P, Torrent J, Martinoia E, Cesco S (2008) Flavanoids of white lupin roots participate in phosphorus mobilisation from soil. Soil Biol Biochem 40: 1971-1974.
-
(2008)
Soil Biol Biochem
, vol.40
, pp. 1971-1974
-
-
Tomasi, N.1
Weisskopf, L.2
Renella, G.3
Landi, L.4
Pinton, R.5
Varanini, Z.6
Nannipieri, P.7
Torrent, J.8
Martinoia, E.9
Cesco, S.10
-
41
-
-
0003489752
-
-
Washington DC: American Society for Microbiology
-
Torriana-Gorini A, Rothman FG, Silver S, Wright A, Yagil E (1987) Phosphate metabolism and cellular regulation in microorganisms. American Society for Microbiology, Washington DC.
-
(1987)
Phosphate Metabolism and Cellular Regulation in Microorganisms
-
-
Torriana-Gorini, A.1
Rothman, F.G.2
Silver, S.3
Wright, A.4
Yagil, E.5
-
42
-
-
0030497690
-
Total bacterial diversity in soil and sediment communities-a review
-
Torsvik V, Sørheim R, Goksøyr J (1996) Total bacterial diversity in soil and sediment communities-a review. J Ind Microbiol 17: 170-178.
-
(1996)
J Ind Microbiol
, vol.17
, pp. 170-178
-
-
Torsvik, V.1
Sørheim, R.2
Goksøyr, J.3
-
45
-
-
0027068863
-
Region-wise development of prototypes of integrated arable farming and outdoor horticulture
-
Wijnands FG, Vereijken PH (1992) Region-wise development of prototypes of integrated arable farming and outdoor horticulture. Neth J Agric Sci 225-238.
-
(1992)
Neth J Agric Sci
, pp. 225-238
-
-
Wijnands, F.G.1
Vereijken, P.H.2
-
46
-
-
38649132267
-
Comparison of soil bacterial communities under diverse agricultural land management and crop production practices
-
Wu T, Chellemi DO, Graham JH, Martin KJ, Rosskopf EN (2008) Comparison of soil bacterial communities under diverse agricultural land management and crop production practices. Microb Ecol 55: 293-310.
-
(2008)
Microb Ecol
, vol.55
, pp. 293-310
-
-
Wu, T.1
Chellemi, D.O.2
Graham, J.H.3
Martin, K.J.4
Rosskopf, E.N.5
|