Metabolic profiling of the methylerythritol phosphate pathway reveals the source of post-illumination isoprene burst from leaves

Plant, Cell and Environment

Volumn 36, Issue 2, 2013, Pages 429-437

  Li, Ziru ^a   Sharkey, Thomas D ^a  

^a Michigan State University   (United States)

Author keywords

Dimethylallyl diphosphate (DMADP); Hydroxymethylbutenyl diphosphate synthase (HDS); Isoprenoids; MEP pathway; Methylerythritol cyclodiphosphate (MEcDP)

Indexed keywords

1,3 BUTADIENE DERIVATIVE; DRUG DERIVATIVE; ERYTHRITOL; FOSFOMYCIN; FOSMIDOMYCIN; HEMITERPENE; ISOPRENE; METHYL D ERYTHRITOL 2,4 CYCLODIPHOSPHATE; METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE; NITROGEN; PENTANE; PLANT EXTRACT;

CAROTENOID; ENZYME ACTIVITY; GAS EXCHANGE; ISOPRENOID; LEAF; LIQUID CHROMATOGRAPHY; MASS SPECTROMETRY; METABOLITE; PHYSIOLOGICAL RESPONSE;

ACCLIMATIZATION; ARTICLE; CHEMISTRY; DARKNESS; DRUG EFFECT; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; LIGHT; MASS SPECTROMETRY; METABOLISM; METABOLOME; PLANT LEAF; POPULUS; RADIATION EXPOSURE; STANDARD; TIME;

ACCLIMATIZATION; BUTADIENES; CHROMATOGRAPHY, HIGH PRESSURE LIQUID; DARKNESS; ERYTHRITOL; FOSFOMYCIN; HEMITERPENES; LIGHT; MASS SPECTROMETRY; METABOLIC NETWORKS AND PATHWAYS; METABOLOME; NITROGEN; PENTANES; PLANT EXTRACTS; PLANT LEAVES; POPULUS; REFERENCE STANDARDS; TIME FACTORS;

EID: 84871918307     PISSN: 01407791     EISSN: 13653040     Source Type: Journal    
DOI: 10.1111/j.1365-3040.2012.02584.x     Document Type: Article

References (39)

1. Behnke K., Ehlting B., Teuber M., Bauerfeind M., Louis S., Hansch R., Polle A., Bohlmann J. & Schnitzler J.P. (2007) Transgenic, non-isoprene emitting poplars don't like it hot. The Plant Journal 51, 485-499.
2. Chameides W.L., Lindsay R.W., Richardson J. & Kiang C.S. (1988) The role of biogenic hydrocarbons in urban photochemical smog: Atlanta as a case study. Science 241, 1473-1475.
3. Charon L., Pale-Grosdemange C. & Rohmer M. (1999) On the reduction steps in the mevalonate independent 2-C-methyl-D-erythritol 4-phosphate (MEP) pathway for isoprenoid biosynthesis in the bacterium Zymomonas mobilis. Tetrahedron Letters 40, 7231-7234.
4. Guenther A., Karl T., Harley P., Wiedinmyer C., Palmer P.I. & Geron C. (2006) Estimates of global terrestrial isoprene emissions using MEGAN (model of emissions of gases and aerosols from nature). Atmospheric Chemistry and Physics Discussions 6, 107-173.
5. Hecht S., Eisenreich W., Adam P., Amslinger S., Kis K., Bacher A., Arigoni D. & Rohdich F. (2001) Studies on the nonmevalonate pathway to terpenes: the role of the GcpE (IspG) protein. Proceedings of the National Academy of Sciences of the United States of America 98, 14837-14842.
6. Kiendler-Scharr A., Wildt J., Dal Maso M., Hohaus T., Kleist E., Mentel T.F., Tillmann R., Uerlings R., Schurr U. & Wahner A. (2009) New particle formation in forests inhibited by isoprene emissions. Nature 461, 381-384.
7. Kuzuyama T., Takahashi S., Watanabe H. & Seto H. (1998) Direct formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate by 1-deoxy-D-xylulose 5-phosphate reductoisomerase, a new enzyme in the non-mevalonate pathway to isopentenyl diphosphate. Tetrahedron Letters 39, 4509-4512.
8. Lendzian K. & Ziegler H. (1970) Über die Regulation der Glucose-6-phosphat-Dehydrogenase in Spinatchloroplasten durch licht. Planta 94, 27-36.
9. Li Z., Ratliff E.A. & Sharkey T.D. (2011) Effect of temperature on post-illumination isoprene emission in oak and poplar. Plant Physiology 155, 1037-1046.
10. Lois L.M., Campos N., Putra S.R., Danielsen K., Rohmer M. & Boronat A. (1998) Cloning and characterization of a gene from Escherichia coli encoding a transketolase-like enzyme that catalyzes the synthesis of d-1-deoxyxylulose 5-phosphate, a common precursor for isoprenoid, thiamin, and pyridoxol biosynthesis. Proceedings of the National Academy of Sciences of the United States of America 95, 2105-2110.
11. Loreto F. & Sharkey T.D. (1990) A gas-exchange study of photosynthesis and isoprene emission in Quercus rubra L. Planta 182, 523-531.
12. Loreto F. & Sharkey T.D. (1993) On the relationship between isoprene emission and photosynthetic metabolites under different environmental conditions. Planta 189, 420-424.
13. Mandel M.A., Feldman K.A., Herrera-Estrella L., Rocha-Sosa M. & León P. (1996) CLA1, a novel gene required for chloroplast development, is highly conserved in evolution. The Plant Journal 9, 649-658.
14. Martin M.J., Stirling C.M., Humphries S.W. & Long S.P. (2000) A process-based model to predict the effects of climatic change on leaf isoprene emission rates. Ecological Modelling 131, 161-174.
15. 31P-NMR spectroscopy after specific inhibition of 2-C-methyl-d-erythritol 2, 4-cyclodiphosphate reductase. Effect of light and temperature. Plant, Cell & Environment 34, 1241-1247.
16. Monson R.K. & Fall R. (1989) Isoprene emission from aspen leaves: influence of environment and relation to photosynthesis and photorespiration. Plant Physiology 90, 267-274.
17. 2 or photon-flux density using a real-time isoprene analyser. Plant, Cell & Environment 14, 517-523.
18. Niinemets Ü., Tenhunen J.D., Harley P.C. & Steinbrecher R. (1999) A model of isoprene emission based on energetic requirements for isoprene synthesis and leaf photosynthetic properties for Liquidambar and Quercus. Plant, Cell & Environment 22, 1319-1335.
19. Okada K. & Hase T. (2005) Cyanobacterial non-mevalonate pathway: (E)-4-hydroxy-3-methylbut-2-enyl diphosphate synthase interacts with ferredoxin in Thermosynechococcus elongatus BP-1. Journal of Biological Chemistry 280, 20672-20679.
20. Phillips M.A., León P., Boronat A. & Rodríguez-Concepción M. (2008) The plastidial MEP pathway: unified nomenclature and resources. Trends in Plant Science 13, 619-623.
21. Rasulov B., Copolovici L., Laisk A. & Niinemets Ü. (2009) Postillumination isoprene emission: in vivo measurements of dimethylallyldiphosphate pool size and isoprene synthase kinetics in aspen leaves. Plant Physiology 149, 1609-1618.
22. Rasulov B., Hüve K., Bichele I., Laisk A. & Niinemets Ü. (2010) Temperature response of isoprene emission in vivo reflects a combined effect of substrate limitations and isoprene synthase activity: a kinetic analysis. Plant Physiology 154, 1558-1570.
23. Rasulov B., Hüve K., Laisk A. & Niinemets Ü. (2011) Induction of a longer term component of isoprene release in darkened aspen leaves: origin and regulation under different environmental conditions. Plant Physiology 156, 816-831.
24. Rivasseau C., Seemann M., Boisson A.-M., Streb P., Gout E., Douce R., Rohmer M. & Bligny R. (2009) Accumulation of 2-C-methyl-D-erythritol 2, 4-cyclodiphosphate in illuminated plant leaves at supraoptimal temperatures reveals a bottleneck of the prokaryotic methylerythritol 4-phosphate pathway of isoprenoid biosynthesis. Plant, Cell & Environment 32, 82-92.
25. Rohdich F., Hecht S., Gärtner K., Adam P., Krieger C., Amslinger S., Arigoni D., Bacher A. & Eisenreich W. (2002) Studies on the nonmevalonate terpene biosynthetic pathway: metabolic role of IspH (LytB) protein. Proceedings of the National Academy of Sciences of the United States of America 99, 1158-1163.
26. Rosenstiel T.N., Fisher A.J., Fall R. & Monson R.K. (2002) Differential accumulation of dimethylallyl diphosphate in leaves and needles of isoprene- and methylbutenol-emitting and nonemitting species. Plant Physiology 129, 1276-1284.
27. + malate dehydrogenase in C3 plants: regulation and role of a light-activated enzyme. Physiologia Plantarum 71, 393-400.
28. Seemann M. & Rohmer M. (2007) Isoprenoid biosynthesis via the methylerythritol phosphate pathway: GcpE and LytB, two novel iron-sulphur proteins. Comptes Rendus Chimie 10, 748-755.
29. Seemann M., Bui B.T.S., Wolff M., Tritsch D., Campos N., Boronat A., Marquet A. & Rohmer M. (2002) Isoprenoid biosynthesis through the methylerythritol phosphate pathway: the (E)-4-hydroxy-3 methylbut-2-enyl diphosphate synthase (GcpE) is a [4Fe-4S] Protein. Angewandte Chemie International Edition 41, 4337-4339.
30. Seemann M., Wegner P., Schünemann V., Bui B.T.S., Wolff M., Marquet A., Trautwein A.X. & Rohmer M. (2005) Isoprenoid biosynthesis in chloroplasts via the methylerythritol phosphate pathway: the (E)-4-hydroxy-3-methylbut-2-enyl diphosphate synthase (GcpE) from Arabidopsis thaliana is a [4Fe-4S] protein. Journal of Biological Inorganic Chemistry 10, 131-137.
31. Seemann M., Tse Sum Bui B., Wolff M., Miginiac-Maslow M. & Rohmer M. (2006) Isoprenoid biosynthesis in plant chloroplasts via the MEP pathway: direct thylakoid/ferredoxin-dependent photoreduction of GcpE/IspG. FEBS Letters 580, 1547-1552.
32. Sharkey T.D., Loreto F. & Delwiche C.F. (1991) The biochemistry of isoprene emission from leaves during photosynthesis. In Trace Gas Emissions by Plants (eds T.D. Sharkey, E.A. Holland & H.A. Mooney ), pp. 153-184. Academic Press, San Diego, CA, USA.
33. Sharkey T.D., Wiberley A.E. & Donohue A.R. (2008) Isoprene emission from plants: why and how. Annals of Botany 101, 5-18.
34. Takahashi S., Kuzuyama T., Watanabe H. & Seto H. (1998) A 1-deoxy-D-xylulose 5-phosphate reductoisomerase catalyzing the formation of 2-C-methyl-D-erythritol 4-phosphate in an alternative nonmevalonate pathway for terpenoid biosynthesis. Proceedings of the National Academy of Sciences of the United States of America 95, 9879-9884.
35. Weise S.E., Schrader S.M., Kleinbeck K.R. & Sharkey T.D. (2006) Carbon balance and circadian regulation of hydrolytic and phosphorolytic breakdown of transitory starch. Plant Physiology 141, 879-886.
36. Wenderoth I., Scheibe R. & von Schaewen A. (1997) Identification of the cysteine residues involved in redox modification of plant plastidic glucose-6-phosphate dehydrogenase. Journal of Biological Chemistry 272, 26985-26990.
37. Went F.W. (1960) Blue hazes in the atmosphere. Nature 187, 641-643.
38. Winter H., Robinson D.G. & Heldt H.W. (1994) Subcellular volumes and metabolite concentrations in spinach leaves. Planta 193, 530-535.
39. Zimmer W., Brüggemann N., Emeis S., Giersch C., Lehning A., Steinbrecher R. & Schnitzler J. (2000) Process-based modelling of isoprene emission by oak leaves. Plant, Cell & Environment 23, 585-595.