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Volumn 79, Issue 1, 2013, Pages 231-239

Form and function of Clostridium thermocellum biofilms

Author keywords

[No Author keywords available]

Indexed keywords

ACID RATIO; BACTERIAL ADHERENCE; BIOFILM ACTIVITY; BIOFILM GROWTH; CARBON FLOW; CELL ATTACHMENTS; CELL DIVISIONS; CELL PRODUCTION; CELL STRUCTURE; CELLULOLYTIC BACTERIUM; CELLULOSE CONVERSION; CELLULOSE HYDROLYSIS; CELLULOSIC SUBSTRATES; CLOSTRIDIUM THERMOCELLUM; COLONIZATION RATE; CONTINUOUS-FLOW REACTORS; EXTRACELLULAR POLYMERIC MATRIXES; HYDROLYSIS RATE; PRIMARY CARBON; SITU FLUORESCENCE IMAGING; SUBSTRATE CONVERSION;

EID: 84871906709     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.02563-12     Document Type: Article
Times cited : (44)

References (46)
  • 2
    • 13044315953 scopus 로고    scopus 로고
    • Microscopy flowcells: perfusion chambers for real time study of biofilms
    • Palmer RJ, Jr. 1999. Microscopy flowcells: perfusion chambers for real time study of biofilms. Methods Enzymol. 310:160-166.
    • (1999) Methods Enzymol. , vol.310 , pp. 160-166
    • Palmer, R.J.Jr.1
  • 5
    • 33544474261 scopus 로고    scopus 로고
    • Structure of a cellulose degrading bacterial community during anaerobic digestion
    • O'Sullivan CA, Burrell PC, Clarke WP, Blackall LL. 2005. Structure of a cellulose degrading bacterial community during anaerobic digestion. Biotechnol. Bioeng. 92:871-878.
    • (2005) Biotechnol. Bioeng. , vol.92 , pp. 871-878
    • O'sullivan, C.A.1    Burrell, P.C.2    Clarke, W.P.3    Blackall, L.L.4
  • 6
    • 25144511357 scopus 로고    scopus 로고
    • Behavior of cellulosedegrading bacteria in thermophilic anaerobic digestion process
    • Syutsubo K, Nagaya Y, Sakai S, Miya A. 2005. Behavior of cellulosedegrading bacteria in thermophilic anaerobic digestion process. Water Sci. Technol. 52:79-84.
    • (2005) Water Sci. Technol. , vol.52 , pp. 79-84
    • Syutsubo, K.1    Nagaya, Y.2    Sakai, S.3    Miya, A.4
  • 7
    • 0027098171 scopus 로고
    • Characteristics of cellulose colonization by a mesophilic, cellulolytic Clostridium (strain C401)
    • Gelhaye E, Petitdemange H, Gay R. 1992. Characteristics of cellulose colonization by a mesophilic, cellulolytic Clostridium (strain C401). Res. Microbiol. 143:891-895.
    • (1992) Res. Microbiol. , vol.143 , pp. 891-895
    • Gelhaye, E.1    Petitdemange, H.2    Gay, R.3
  • 8
    • 0030693230 scopus 로고    scopus 로고
    • Image analysis for the study of the development of anaerobic biofilms on materials characteristic of landfilled refuse
    • Jones LR, Watson-Craik IA, Senior E. 1997. Image analysis for the study of the development of anaerobic biofilms on materials characteristic of landfilled refuse. Water Sci. Technol. 36:485-492.
    • (1997) Water Sci. Technol. , vol.36 , pp. 485-492
    • Jones, L.R.1    Watson-craik, I.A.2    Senior, E.3
  • 9
    • 51349111164 scopus 로고    scopus 로고
    • Application of flowcell technology for monitoring biofilm development and cellulose degradation in leachate and rumen systems
    • O'Sullivan CA, Burrell PC, Pasmore M, Clarke WP, Blackall LL. 2009. Application of flowcell technology for monitoring biofilm development and cellulose degradation in leachate and rumen systems. Bioresour. Technol. 100:492-496.
    • (2009) Bioresour. Technol. , vol.100 , pp. 492-496
    • O'sullivan, C.A.1    Burrell, P.C.2    Pasmore, M.3    Clarke, W.P.4    Blackall, L.L.5
  • 10
    • 0024404585 scopus 로고
    • Fermentation of cellulosic substrates in batch and continuous culture by Clostridium thermocellum
    • Lynd LR, Grethlein HE, Wolkin RH. 1989. Fermentation of cellulosic substrates in batch and continuous culture by Clostridium thermocellum. Appl. Environ. Microbiol. 55:3131-3139.
    • (1989) Appl. Environ. Microbiol. , vol.55 , pp. 3131-3139
    • Lynd, L.R.1    Grethlein, H.E.2    Wolkin, R.H.3
  • 11
    • 58549116354 scopus 로고    scopus 로고
    • Influence of initial cellulose concentration on the carbon flow distribution during batch fermentation by Clostridium thermocellum ATCC 27405
    • Islam R, Cicek N, Sparling R, Levin D. 2009. Influence of initial cellulose concentration on the carbon flow distribution during batch fermentation by Clostridium thermocellum ATCC 27405. Appl. Microbiol. Biotechnol. 82:141-148.
    • (2009) Appl. Microbiol. Biotechnol. , vol.82 , pp. 141-148
    • Islam, R.1    Cicek, N.2    Sparling, R.3    Levin, D.4
  • 12
    • 18844371475 scopus 로고    scopus 로고
    • Cellulose utilization by Clostridium thermocellum: bioenergetics and hydrolysis product assimilation
    • Zhang YP, Lynd LR. 2005. Cellulose utilization by Clostridium thermocellum: bioenergetics and hydrolysis product assimilation. Proc. Natl. Acad. Sci. U. S. A. 102:7321-7325.
    • (2005) Proc. Natl. Acad. Sci. U. S. A. , vol.102 , pp. 7321-7325
    • Zhang, Y.P.1    Lynd, L.R.2
  • 14
    • 84871899166 scopus 로고    scopus 로고
    • Surface microbiology of cellulolytic bacteria
    • In Baltz RH, Davies JE, Demain AL (ed), 3rd ed. ASM Press, Washington, DC
    • Dumitrache A, Wolfaardt GM, Lynd LR. 2010. Surface microbiology of cellulolytic bacteria, p 634-643. In Baltz RH, Davies JE, Demain AL (ed), Manual of industrial microbiology and biotechnology, 3rd ed. ASM Press, Washington, DC.
    • (2010) Manual of industrial microbiology and biotechnology , pp. 634-643
    • Dumitrache, A.1    Wolfaardt, G.M.2    Lynd, L.R.3
  • 15
    • 84863469563 scopus 로고    scopus 로고
    • A defined growth medium with very low background carbon for culturing Clostridium thermocellum
    • Holwerda EK, Hirst KD, Lynd LR. 2012. A defined growth medium with very low background carbon for culturing Clostridium thermocellum. J. Ind. Microbiol. Biotechnol. 39:943-947.
    • (2012) J. Ind. Microbiol. Biotechnol. , vol.39 , pp. 943-947
    • Holwerda, E.K.1    Hirst, K.D.2    Lynd, L.R.3
  • 16
    • 0028117074 scopus 로고
    • Use of fluorochromes for direct enumeration of total bacteria in environmental samples: past and present
    • Kepner RL, Jr, Pratt JR. 1994. Use of fluorochromes for direct enumeration of total bacteria in environmental samples: past and present. Microbiol. Rev. 58:603-615.
    • (1994) Microbiol. Rev. , vol.58 , pp. 603-615
    • Kepner Jr., R.L.1    Pratt, J.R.2
  • 17
    • 0031399514 scopus 로고    scopus 로고
    • Measurement of bacterial size via image analysis of epifluorescence preparations: description of an inexpensive system and solutions to some of the most common problems
    • Massana R, Gasol JM, Bjørnsen PK, Blackburn N, Hagström A, Hietanen S, Hygum BH, Kuparinen J, Pedrós-Alió C. 1997. Measurement of bacterial size via image analysis of epifluorescence preparations: description of an inexpensive system and solutions to some of the most common problems. Sci. Mar. 61:397-407.
    • (1997) Sci. Mar. , vol.61 , pp. 397-407
    • Massana, R.1    Gasol, J.M.2    Bjornsen, P.K.3    Blackburn, N.4    Hagström, A.5    Hietanen, S.6    Hygum, B.H.7    Kuparinen, J.8    Pedrós-alió, C.9
  • 18
    • 42549123024 scopus 로고    scopus 로고
    • Measurement and quantification of sessile and planktonic microbial populations during the anaerobic digestion of cellulose
    • Jensen PD, Hardin MT, Clarke WP. 2008. Measurement and quantification of sessile and planktonic microbial populations during the anaerobic digestion of cellulose. Water Sci. Technol. 57:465-469.
    • (2008) Water Sci. Technol. , vol.57 , pp. 465-469
    • Jensen, P.D.1    Hardin, M.T.2    Clarke, W.P.3
  • 22
    • 67650263428 scopus 로고    scopus 로고
    • Effect of biomass concentration and inoculum source on the rate of anaerobic cellulose solubilization
    • Jensen PD, Hardin MT, Clarke WP. 2009. Effect of biomass concentration and inoculum source on the rate of anaerobic cellulose solubilization. Bioresour. Technol. 100:5219-5225.
    • (2009) Bioresour. Technol. , vol.100 , pp. 5219-5225
    • Jensen, P.D.1    Hardin, M.T.2    Clarke, W.P.3
  • 23
    • 0022512490 scopus 로고
    • Ultrastructure of the cell surface cellulosome of Clostridium thermocellum and its interaction with cellulose
    • Bayer EA, Lamed R. 1986. Ultrastructure of the cell surface cellulosome of Clostridium thermocellum and its interaction with cellulose. J. Bacteriol. 167:828-836.
    • (1986) J. Bacteriol. , vol.167 , pp. 828-836
    • Bayer, E.A.1    Lamed, R.2
  • 24
    • 84856072252 scopus 로고    scopus 로고
    • Cellulases dig deep: in situ observation of the mesoscopic structural dynamics of enzymatic cellulose degradation
    • Bubner P, Dohr J, Plank H, Mayrhofer C, Nidetzky B. 2012. Cellulases dig deep: in situ observation of the mesoscopic structural dynamics of enzymatic cellulose degradation. J. Biol. Chem. 287:2759-2765.
    • (2012) J. Biol. Chem. , vol.287 , pp. 2759-2765
    • Bubner, P.1    Dohr, J.2    Plank, H.3    Mayrhofer, C.4    Nidetzky, B.5
  • 26
    • 0034655515 scopus 로고    scopus 로고
    • Adhesion to cellulose by Ruminococcus albus: a combination of cellulosomes and Pil-proteins?
    • Morrison M, Miron J. 2000. Adhesion to cellulose by Ruminococcus albus: a combination of cellulosomes and Pil-proteins? FEMS Microbiol. Lett. 185:109-115.
    • (2000) FEMS Microbiol. Lett. , vol.185 , pp. 109-115
    • Morrison, M.1    Miron, J.2
  • 27
    • 0021167693 scopus 로고
    • Clostridium thermocellum: adhesion and sporulation while adhered to cellulose and hemicellulose
    • Wiegel J, Dykstra M. 1984. Clostridium thermocellum: adhesion and sporulation while adhered to cellulose and hemicellulose. Appl. Microbiol. Biotechnol. 20:59-65.
    • (1984) Appl. Microbiol. Biotechnol. , vol.20 , pp. 59-65
    • Wiegel, J.1    Dykstra, M.2
  • 28
    • 70350238670 scopus 로고    scopus 로고
    • Planktonic cell yield is linked to biofilm development
    • Bester E, Edwards EA, Wolfaardt GM. 2009. Planktonic cell yield is linked to biofilm development. Can. J. Microbiol. 55:1195-1206.
    • (2009) Can. J. Microbiol. , vol.55 , pp. 1195-1206
    • Bester, E.1    Edwards, E.A.2    Wolfaardt, G.M.3
  • 29
    • 0021090370 scopus 로고
    • Ultrastructure and extreme heat resistance of spores from thermophilic Clostridium species
    • Hyun HH, Zeikus JG, Longin R. 1983. Ultrastructure and extreme heat resistance of spores from thermophilic Clostridium species. J. Bacteriol. 156:1332-1337.
    • (1983) J. Bacteriol. , vol.156 , pp. 1332-1337
    • Hyun, H.H.1    Zeikus, J.G.2    Longin, R.3
  • 30
    • 0016804596 scopus 로고
    • Heat resistance of bacterial endospores and concept of an expanded osmoregulatory cortex
    • Gould GW, Dring GJ. 1975. Heat resistance of bacterial endospores and concept of an expanded osmoregulatory cortex. Nature 258:402-405.
    • (1975) Nature , vol.258 , pp. 402-405
    • Gould, G.W.1    Dring, G.J.2
  • 31
    • 84857087282 scopus 로고    scopus 로고
    • An agr quorum sensing system that regulates granulose formation and sporulation in Clostridium acetobutylicum
    • Steiner E, Scott J, Minton NP, Winzer K. 2012. An agr quorum sensing system that regulates granulose formation and sporulation in Clostridium acetobutylicum. Appl. Environ. Microbiol. 78:1113-1122.
    • (2012) Appl. Environ. Microbiol. , vol.78 , pp. 1113-1122
    • Steiner, E.1    Scott, J.2    Minton, N.P.3    Winzer, K.4
  • 32
    • 38749094897 scopus 로고    scopus 로고
    • Conservation and evolutionary dynamics of the agr cell-to-cell communication system across firmicutes
    • Wuster A, Babu MM. 2008. Conservation and evolutionary dynamics of the agr cell-to-cell communication system across firmicutes. J. Bacteriol. 190:743-746.
    • (2008) J. Bacteriol. , vol.190 , pp. 743-746
    • Wuster, A.1    Babu, M.M.2
  • 33
    • 33748615139 scopus 로고    scopus 로고
    • The detection of environmental autoinducing peptide quorum-sensing genes from an uncultured Clostridium sp
    • Burrell PC. 2006. The detection of environmental autoinducing peptide quorum-sensing genes from an uncultured Clostridium sp. in landfill leachate reactor biomass. Lett. Appl. Microbiol. 43:455-460.
    • (2006) in landfill leachate reactor biomass. Lett. Appl. Microbiol. , vol.43 , pp. 455-460
    • Burrell, P.C.1
  • 35
    • 79961072865 scopus 로고    scopus 로고
    • Enzymatic hydrolysis of cellulosic biomass
    • Yang B, Dai Z, Ding SY, Wyman CE. 2011. Enzymatic hydrolysis of cellulosic biomass. Biofuels 2:421-450.
    • (2011) Biofuels , vol.2 , pp. 421-450
    • Yang, B.1    Dai, Z.2    Ding, S.Y.3    Wyman, C.E.4
  • 36
    • 10844286172 scopus 로고    scopus 로고
    • Toward an aggregated understanding of enzymatic hydrolysis of cellulose: noncomplexed cellulase systems
    • Zhang YP, Lynd LR. 2004. Toward an aggregated understanding of enzymatic hydrolysis of cellulose: noncomplexed cellulase systems. Biotechnol. Bioeng. 88:797-824.
    • (2004) Biotechnol. Bioeng. , vol.88 , pp. 797-824
    • Zhang, Y.P.1    Lynd, L.R.2
  • 37
    • 0029146404 scopus 로고
    • Growth of the thermophilic bacterium Clostridium thermocellum in continuous culture
    • Strobel HJ. 1995. Growth of the thermophilic bacterium Clostridium thermocellum in continuous culture. Curr. Microbiol. 31:210-214.
    • (1995) Curr. Microbiol. , vol.31 , pp. 210-214
    • Strobel, H.J.1
  • 38
    • 0028785825 scopus 로고
    • Carbohydrate transport by the anaerobic thermophile Clostridium thermocellum LQRI
    • Strobel HJ, Caldwell FC, Dawson KA. 1995. Carbohydrate transport by the anaerobic thermophile Clostridium thermocellum LQRI. Appl. Environ. Microbiol. 61:4012-4015.
    • (1995) Appl. Environ. Microbiol. , vol.61 , pp. 4012-4015
    • Strobel, H.J.1    Caldwell, F.C.2    Dawson, K.A.3
  • 39
    • 0029012688 scopus 로고
    • Cellodextrin efflux by the cellulolytic ruminal bacterium Fibrobacter succinogenes and its potential role in the growth of nonadherent bacteria
    • Wells JE, Russell JB, Shi Y, Weimer PJ. 1995. Cellodextrin efflux by the cellulolytic ruminal bacterium Fibrobacter succinogenes and its potential role in the growth of nonadherent bacteria. Appl. Environ. Microbiol. 61:1757-1762.
    • (1995) Appl. Environ. Microbiol. , vol.61 , pp. 1757-1762
    • Wells, J.E.1    Russell, J.B.2    Shi, Y.3    Weimer, P.J.4
  • 41
    • 0000304953 scopus 로고
    • Effects of stirring and hydrogen on fermentation products of Clostridium thermocellum
    • Lamed R, Lobos J, Su T. 1988. Effects of stirring and hydrogen on fermentation products of Clostridium thermocellum. Appl. Environ. Microbiol. 54:1216-1221.
    • (1988) Appl. Environ. Microbiol. , vol.54 , pp. 1216-1221
    • Lamed, R.1    Lobos, J.2    Su, T.3
  • 42
    • 0017389068 scopus 로고
    • Fermentation of cellulose and cellobiose by Clostridium thermocellum in the absence and presence of Methanobacterium thermoautotrophicum
    • Weimer PJ, Zeikus JG. 1977. Fermentation of cellulose and cellobiose by Clostridium thermocellum in the absence and presence of Methanobacterium thermoautotrophicum. Appl. Environ. Microbiol. 33:289-297.
    • (1977) Appl. Environ. Microbiol. , vol.33 , pp. 289-297
    • Weimer, P.J.1    Zeikus, J.G.2
  • 43
    • 0032912348 scopus 로고    scopus 로고
    • Carbon and electron flow in Clostridium cellulolyticum grown in chemostat culture on synthetic medium
    • Guedon E, Payot S, Desvaux M, Petitdemange H. 1999. Carbon and electron flow in Clostridium cellulolyticum grown in chemostat culture on synthetic medium. J. Bacteriol. 181:3262-3269.
    • (1999) J. Bacteriol. , vol.181 , pp. 3262-3269
    • Guedon, E.1    Payot, S.2    Desvaux, M.3    Petitdemange, H.4
  • 44
    • 33747725321 scopus 로고    scopus 로고
    • Effect of substrate loading on hydrogen production during anaerobic fermentation by Clostridium thermocellum 27405
    • Islam R, Cicek N, Sparling R, Levin D. 2006. Effect of substrate loading on hydrogen production during anaerobic fermentation by Clostridium thermocellum 27405. Appl. Microbiol. Biotechnol. 72:576-583.
    • (2006) Appl. Microbiol. Biotechnol. , vol.72 , pp. 576-583
    • Islam, R.1    Cicek, N.2    Sparling, R.3    Levin, D.4
  • 46
    • 82455199199 scopus 로고    scopus 로고
    • End-product induced metabolic shifts in Clostridium thermocellum ATCC 27405
    • Rydzak T, Levin DB, Cicek N, Sparling R. 2011. End-product induced metabolic shifts in Clostridium thermocellum ATCC 27405. Appl. Microbiol. Biotechnol. 92:199-209.
    • (2011) Appl. Microbiol. Biotechnol. , vol.92 , pp. 199-209
    • Rydzak, T.1    Levin, D.B.2    Cicek, N.3    Sparling, R.4


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