메뉴 건너뛰기




Volumn 76, Issue 1, 2013, Pages 7-11

A template-based automatic skull-stripping approach for mouse brain MR microscopy

Author keywords

Brain surface extraction; MRM; Non brain tissue removal; Skull stripping

Indexed keywords

BRAIN; EXTRACTION; MAGNETIC RESONANCE; MAGNETIC RESONANCE IMAGING; MAMMALS; NEUROIMAGING; TISSUE;

EID: 84871656998     PISSN: 1059910X     EISSN: 10970029     Source Type: Journal    
DOI: 10.1002/jemt.22128     Document Type: Article
Times cited : (7)

References (20)
  • 1
    • 70049108710 scopus 로고    scopus 로고
    • Computational anatomy with the SPM software
    • Ashburner J. 2009. Computational anatomy with the SPM software. Magn Reson Imaging 27: 1163-1174.
    • (2009) Magn Reson Imaging , vol.27 , pp. 1163-1174
    • Ashburner, J.1
  • 2
    • 0032970425 scopus 로고    scopus 로고
    • Nonlinear spatial normalization using basis functions
    • Ashburner J, Friston KJ. 1999. Nonlinear spatial normalization using basis functions. Hum Brain Mapp 7: 254-266.
    • (1999) Hum Brain Mapp , vol.7 , pp. 254-266
    • Ashburner, J.1    Friston, K.J.2
  • 3
    • 0033933649 scopus 로고    scopus 로고
    • Voxel-based morphometry-The methods
    • Ashburner J, Friston KJ. 2000. Voxel-based morphometry-The methods. NeuroImage 11: 805-821.
    • (2000) NeuroImage , vol.11 , pp. 805-821
    • Ashburner, J.1    Friston, K.J.2
  • 4
    • 79955466394 scopus 로고    scopus 로고
    • Structural MRI detects progressive regional brain atrophy and neuroprotective effects in N171-82Q Huntington's disease mouse model
    • Cheng Y, Peng Q, Hou Z, Aggarwal M, Zhang J, Mori S, Ross CA, Duan W. 2011. Structural MRI detects progressive regional brain atrophy and neuroprotective effects in N171-82Q Huntington's disease mouse model. NeuroImage 56: 1027-1034.
    • (2011) NeuroImage , vol.56 , pp. 1027-1034
    • Cheng, Y.1    Peng, Q.2    Hou, Z.3    Aggarwal, M.4    Zhang, J.5    Mori, S.6    Ross, C.A.7    Duan, W.8
  • 5
    • 84855176732 scopus 로고    scopus 로고
    • Robust automatic rodent brain extraction using 3-D pulse-coupled neural networks (PCNN)
    • Chou N, Wu J, Bai Bingren J, Qiu A, Chuang KH. 2011. Robust automatic rodent brain extraction using 3-D pulse-coupled neural networks (PCNN). IEEE Trans Image Process 20: 2554-2264.
    • (2011) IEEE Trans Image Process , vol.20 , pp. 2554-2264
    • Chou, N.1    Wu, J.2    Bai Bingren, J.3    Qiu, A.4    Chuang, K.H.5
  • 6
    • 45849093291 scopus 로고    scopus 로고
    • High resolution three-dimensional brain atlas using an average magnetic resonance image of 40 adult C57Bl/6J mice
    • Dorr AE, Lerch JP, Spring S, Kabani N, Henkelman RM. 2008. High resolution three-dimensional brain atlas using an average magnetic resonance image of 40 adult C57Bl/6J mice. NeuroImage 42: 60-69.
    • (2008) NeuroImage , vol.42 , pp. 60-69
    • Dorr, A.E.1    Lerch, J.P.2    Spring, S.3    Kabani, N.4    Henkelman, R.M.5
  • 8
    • 0343517060 scopus 로고    scopus 로고
    • A cooperative framework for segmentation of MRI brain scans
    • Germond L, Dojat M, Taylor C, Garbay C. 2000. A cooperative framework for segmentation of MRI brain scans. Artif Intell Med 20: 77-93.
    • (2000) Artif Intell Med , vol.20 , pp. 77-93
    • Germond, L.1    Dojat, M.2    Taylor, C.3    Garbay, C.4
  • 12
    • 69949098104 scopus 로고    scopus 로고
    • Accurate and robust extraction of brain regions using a deformable model based on radial basis functions
    • Liu JX, Chen YS, Chen LF. 2009. Accurate and robust extraction of brain regions using a deformable model based on radial basis functions. J Neurosci Methods 183: 255-266.
    • (2009) J Neurosci Methods , vol.183 , pp. 255-266
    • Liu, J.X.1    Chen, Y.S.2    Chen, L.F.3
  • 13
    • 0018306059 scopus 로고
    • A threshold selection method from gray-level histograms
    • Otsu N. 1979. A threshold selection method from gray-level histograms. IEEE Trans Syst Man Cybernetics 9: 62-66.
    • (1979) IEEE Trans Syst Man Cybernetics , vol.9 , pp. 62-66
    • Otsu, N.1
  • 14
    • 57449088803 scopus 로고    scopus 로고
    • Use of magnetic resonance imaging for anatomical phenotyping of the R6/2 mouse model of Huntington's disease
    • Sawiak SJ, Wood NI, Williams GB, Morton AJ, Carpenter TA. 2009. Use of magnetic resonance imaging for anatomical phenotyping of the R6/2 mouse model of Huntington's disease. Neurobiol Dis 33: 12-19.
    • (2009) Neurobiol Dis , vol.33 , pp. 12-19
    • Sawiak, S.J.1    Wood, N.I.2    Williams, G.B.3    Morton, A.J.4    Carpenter, T.A.5
  • 15
    • 0036624329 scopus 로고    scopus 로고
    • BrainSuite: An automated cortical surface extraction tool
    • Shattuck DW, Leahy RM. 2002. BrainSuite: An automated cortical surface extraction tool. Med Image Anal 6: 129-142.
    • (2002) Med Image Anal , vol.6 , pp. 129-142
    • Shattuck, D.W.1    Leahy, R.M.2
  • 16
    • 0031987382 scopus 로고    scopus 로고
    • A non-parametric method for automatic correction of intensity non-uniformity in MRI data
    • Sled JG, Zijdenbos AP, Evans AC. 1998. A non-parametric method for automatic correction of intensity non-uniformity in MRI data. IEEE Trans Med Imaging 17: 87-97.
    • (1998) IEEE Trans Med Imaging , vol.17 , pp. 87-97
    • Sled, J.G.1    Zijdenbos, A.P.2    Evans, A.C.3
  • 17
    • 0036828879 scopus 로고    scopus 로고
    • Fast robust automated brain extraction
    • Smith S. 2002. Fast robust automated brain extraction. Hum Brain Mapp 17: 143-155.
    • (2002) Hum Brain Mapp , vol.17 , pp. 143-155
    • Smith, S.1
  • 18
    • 63049098646 scopus 로고    scopus 로고
    • A semi-automatic image segmentation method for extraction of brain volume from in vivo mouse head magnetic resonance imaging using Constraint Level Sets
    • Uberti MG, Boska MD, Liu Y. 2009. A semi-automatic image segmentation method for extraction of brain volume from in vivo mouse head magnetic resonance imaging using Constraint Level Sets. J Neurosci Methods 179: 338-344.
    • (2009) J Neurosci Methods , vol.179 , pp. 338-344
    • Uberti, M.G.1    Boska, M.D.2    Liu, Y.3
  • 19
    • 44949148164 scopus 로고    scopus 로고
    • Longitudinal brain MRI study in a mouse model of Rett Syndrome and the effects of choline
    • Ward BC, Agarwal S, Wang K, Berger-Sweeney J, Kolodny NH. 2008. Longitudinal brain MRI study in a mouse model of Rett Syndrome and the effects of choline. Neurobiol Dis 31: 110-119.
    • (2008) Neurobiol Dis , vol.31 , pp. 110-119
    • Ward, B.C.1    Agarwal, S.2    Wang, K.3    Berger-Sweeney, J.4    Kolodny, N.H.5
  • 20
    • 0035889774 scopus 로고    scopus 로고
    • Interactive 3-dimensional segmentation of MRI data in personal computer environment
    • Yoo SS, Lee CU, Choi BG, Saiviroonporn P. 2001. Interactive 3-dimensional segmentation of MRI data in personal computer environment. J Neurosci Methods 112: 75-82.
    • (2001) J Neurosci Methods , vol.112 , pp. 75-82
    • Yoo, S.S.1    Lee, C.U.2    Choi, B.G.3    Saiviroonporn, P.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.