A physiologically based kinetic model for bacterial sulfide oxidation

Water Research

Volumn 47, Issue 2, 2013, Pages 483-492

  Klok, Johannes B M ^a   de Graaff, Marco ^a,b   van den Bosch, Pim L F ^a   Boelee, Nadine C ^a   Keesman, Karel J ^a   Janssen, Albert J H ^a,c  

^a WAGENINGEN UNIVERSITY   (Netherlands)

^b EUROPEAN CENTRE OF EXCELLENCE FOR SUSTAINABLE WATER TECHNOLOGY   (Netherlands)

^c E and P   (Netherlands)

Author keywords

Haloalkaliphilic; Kinetics; Oxidation; Sulfide

Indexed keywords

BACTERIA; DISSOLVED OXYGEN; OXIDATION; PHYSIOLOGICAL MODELS; RESPIRATORY SYSTEM; SULFUR COMPOUNDS;

BIOTECHNOLOGICAL PROCESS; CYTOCHROME C; END-PRODUCTS; GAS STREAMS; HALOALKALIPHILIC; KINETIC MODELS; PRODUCT FORMATION; SULFIDE OXIDATION; SULFIDE-OXIDIZING BACTERIA; SULPHIDE;

KINETICS;

CYTOCHROME C; SULFIDE;

BACTERIUM; BIOTECHNOLOGY; CYTOCHROME; DISSOLVED OXYGEN; ENZYME ACTIVITY; HYDROGEN SULFIDE; MODEL VALIDATION; NUMERICAL MODEL; OPTIMIZATION; OXIDATION; PHYSIOLOGICAL RESPONSE; REACTION KINETICS;

ARTICLE; DESULFURIZATION; ENZYME MECHANISM; MATHEMATICAL MODEL; MICHAELIS MENTEN KINETICS; NONHUMAN; OXIDATION; PRIORITY JOURNAL;

BACTERIA (MICROORGANISMS);

EID: 84871496040     PISSN: 00431354     EISSN: 18792448     Source Type: Journal    
DOI: 10.1016/j.watres.2012.09.021     Document Type: Article

References (36)

1. Abusam A., Keesman K.J., Van Straten G., Spanjers H., Meinema K. Parameter estimation procedure for complex non-linear systems: calibration of ASM No.1 for N-removal in a full-scale oxidation ditch. Water Science and Technology 2001, 43(7):357-365.
2. Arp D.J., Stein L.Y. Metabolism of inorganic N compounds by ammonia-oxidizing bacteria. Critical Reviews in Biochemistry and Molecular Biology 2003, 38(6):471-495.
3. Bamford V.A., Bruno S., Rasmussen T., Appia-Ayme C., Cheesman M.R., Berks B.C., Hemmings A.M. Structural basis for the oxidation of thiosulfate by a sulfur cycle enzyme. EMBO Journal 2002, 21(21):5599-5610.
4. Barrientos A., Cadenas E., Genis R., Papa S., Stuchebrukhov A. Molecular mechanism of proton translocation by cytochrome c oxidase. Antioxidants and Redox Signaling 2008, 10(1).
5. Brito J.A., Sousa F.L., Stelter M., Bandeiras T.M., Vonrhein C., Teixeira M., Pereira M.M., Archer M. Structural and functional insights into sulfide:quinone oxidoreductase. Biochemistry 2009, 48(24):5613-5622.
6. Changeux J.P., Edelstein S.J. Allosteric mechanisms of signal transduction. Science 2005, 308(5727):1424-1428.
7. Collman J.P., Ghosh S., Dey A., Decréau R.A. Using a functional enzyme model to understand the chemistry behind hydrogen sulfide induced hibernation. Proceedings of the National Academy of Sciences USA 2009, 106(52):22090-22095.
8. de Graaff M., Klok J.B.M., Bijmans M.F.M., Muyzer G., Janssen A.J.H. Application of a 2-step process for the biological treatment of sulfidic spent caustics. Water Research 2012, 46(3):723-730.
9. Griesbeck C., Hauska G., Schutz M. Biological sulfide oxidation: sulfide-quinone reductase (SQR), the primary reaction. Research Developments in Microbiology 2000, 4:179-203.
10. Holmberg A., Ranta J. Procedures for parameter and state estimation of microbial growth process models. Automatica 1982, 18(2):181-193.
11. Janssen A.J.H., Ruitenberg R., Buisman C.J.N. Industrial applications of new sulphur biotechnology. Water Science and Technology 2001, 44(8):85-90.
12. Janssen A.J.H., Van Leerdam R.C., Van den Bosch P.L.F., Van Zessen E., Van Heeringen G., Buisman C.J.N. Development of a family of large-scale biotechnological processes to desulphurise industrial gases. 2nd International Congress on Biotechniques for Air Pollution Control, a Coruña, Spain 2007.
13. Janssen A.J.H., Lens P.N.L., Stams A.J.M., Plugge C.M., Sorokin D.Y., Muyzer G., Dijkman H., Van Zessen E., Luimes P., Buisman C.J.N. Application of bacteria involved in the biological sulfur cycle for paper mill effluent purification. Science of the Total Environment 2009, 407(4):1333-1343.
14. Kampschreur M.J., Temmink H., Kleerebezem R., Jetten M.S.M., van Loosdrecht M.C.M. Nitrous oxide emission during wastewater treatment. Water Research 2009, 43(17):4093-4103.
15. Kappler U., Bailey S. Molecular basis of intramolecular electron transfer in sulfite-oxidizing enzymes is revealed by high resolution structure of a heterodimeric complex of the catalytic molybdopterin subunit and a c-type cytochrome subunit. The Journal of Biological Chemistry 2005, 280(26):24999-25007.
16. Keesman K.J. State and parameter estimation in biotechnical batch reactors. Control Engineering Practice 2002, 10(2):219-225.
17. Keesman K. System Identification an Introduction 2011, Springer Verlag, London.
18. Kelly D.P. Thermodynamic aspects of energy conservation by chemolithotrophic sulfur bacteria in relation to the sulfur oxidation pathways. Archives of Microbiology 1999, 171(4):219-229.
19. Kleinjan W.E., De Keizer A., Janssen A.J.H. Equilibrium of the reaction between dissolved sodium sulfide and biologically produced sulfur. Colloids and Surfaces B 2005, 43(3-4):228-237.
20. Kleinjan W.E., De Keizer A., Janssen A.J.H. Kinetics of the reaction between dissolved sodium sulfide and biologically produced sulfur. Industrial and Engineering Chemistry Research 2005, 44(2):309-317.
21. Klok J.B.M., Van Den Bosch P.L.F., Stams A.J.M., Buisman C.J.N., Keesman K.J., Janssen A.J.H. Pathways of sulfide oxidation by haloalkaliphilic bacteria in limited-oxygen gas lift bioreactors. Environmental Science and Technology 2012, 46(14):7581-7586.
22. Mitchell P., Moyle J. Chemiosmotic hypothesis of oxidative phosphorylation. Nature 1967, 213(5072):137-139.
23. Muyzer G., Sorokin D.Y., Mavromatis K., Lapidus A., Clum A., Ivanova N., Pati A., d'Haeseleer P., Woyke T., Kyrpides N.C. Complete genome sequence of "Thioalkalivibrio sulfidophilus" HL-EbGr7. Standards in Genomic Sciences 2011, 4(1):23-35.
24. O'Brien D.J., Birkner F.B. Kinetics of oxygenation of reduced sulfur species in aqueous solution. Environmental Science and Technology 1977, 11(12):1114-1120.
25. Sakurai H., Ogawa T., Shiga M., Inoue K. Inorganic sulfur oxidizing system in green sulfur bacteria. Photosynthesis Research 2010, 104(2):163-176.
26. Sin G., Odman P., Petersen N., Lantz A.E., Gernaey K.V. Matrix notation for efficient development of first-principles models within pat applications: integrated modeling of antibiotic production with streptomyces coelicolor. Biotechnology and Bioengineering 2008, 101(1):153-171.
27. Sorokin D.Y., Kuenen J.G. Haloalkaliphilic sulfur-oxidizing bacteria in soda lakes. FEMS Microbiology Reviews 2005, 29(4):685-702.
28. Sorokin D.Y., de Jong G.A.H., Robertson L.A., Kuenen G.J. Purification and characterization of sulfide dehydrogenase from alkaliphilic chemolithoautotrophic sulfur-oxidizing bacteria. FEBS Letters 1998, 427:11-14.
29. Sorokin D.Y., Banciu H., Van Loosdrecht M., Kuenen J.G. Growth physiology and competitive interaction of obligately chemolithoautotrophic, haloalkaliphilic, sulfur-oxidizing bacteria from soda lakes. Extremophiles 2003, 7(3):195-203.
30. Sorokin D.Y., Van Den Bosch P.L.F., Abbas B., Janssen A.J.H., Muyzer G. Microbiological analysis of the population of extremely haloalkaliphilic sulfur-oxidizing bacteria dominating in lab-scale sulfide-removing bioreactors. Applied Microbiology and Biotechnology 2008, 80(6):965-975.
31. Sorokin D.Y., Kuenen G.J., Muyzer G. The microbial sulfur cycle at extremely haloalkaline conditions of soda lakes. Frontiers in Microbiology 2011, 2(44).
32. Van Den Bosch P., L.F., Van Beusekom O.C., Buisman C.J.N., Janssen A.J.H. Sulfide oxidation at halo-alkaline conditions in a fed-batch bioreactor. Biotechnology and Bioengineering 2007, 97(5):1053-1063.
33. Van Den Bosch P., L.F., Sorokin D.Y., Buisman C.J.N., Janssen A.J.H. The effect of pH on thiosulfate formation in a biotechnological process for the removal of hydrogen sulfide from gas streams. Environmental Science and Technology 2008, 42(7):2637-2642.
34. Vanrolleghem P.A., Sin G., Gernaey K.V. Transient response of aerobic and anoxic activated sludge activities to sudden substrate concentration changes. Biotechnology and Bioengineering 2004, 86(3):277-290.
35. Visser J.M., Robertson L.A., Van Verseveld H.W., Kuenen J.G. Sulfur production by obligately chemolithoautotrophic thiobacillus species. Applied and Environmental Microbiology 1997, 63(6):2300-2305.
36. 2O production in biological wastewater treatment under nitrifying and denitrifying conditions. Water Research 2012, 46(4):1027-1037.