Impact of anisotropic atomic motions in proteins on powder-averaged incoherent neutron scattering intensities

Journal of Chemical Physics

Volumn 137, Issue 22, 2012, Pages

  Kneller, Gerald R ^a,b,c   Chevrot, Guillaume ^a,b  

^a CENTRE DE BIOPHYSIQUE MOLÉCULAIRE   (France)

^b SYNCHROTRON SOLEIL   (France)

^c UNIVERSITÉ D'ORLÉANS   (France)

Author keywords

[No Author keywords available]

Indexed keywords

ATOMIC MOTION; CORRELATION FUNCTION; ELASTIC INCOHERENT STRUCTURE FACTORS; INCOHERENT NEUTRON; MULTIPOLES; POWDER SAMPLES; SCATTERING INTENSITY;

ATOMS; NEUTRON SCATTERING; PROTEINS;

ANISOTROPY;

LYSOZYME; PROTEIN;

ANISOTROPY; ARTICLE; CHEMICAL STRUCTURE; CHEMISTRY; METABOLISM; METHODOLOGY; MOVEMENT (PHYSIOLOGY); NEUTRON DIFFRACTION; POWDER;

ANISOTROPY; MODELS, MOLECULAR; MOVEMENT; MURAMIDASE; NEUTRON DIFFRACTION; POWDERS; PROTEINS;

EID: 84871210638     PISSN: 00219606     EISSN: None     Source Type: Journal    
DOI: 10.1063/1.4769782     Document Type: Article

References (29)

1. S. Lovesey, Theory of Neutron Scattering from Condensed Matter (Clarendon, Oxford, 1984), Vol. I.
2. M. Bée, Quasielastic Neutron Scattering: Principles and Applications in Solid State Chemistry, Biology and Materials Science (Hilger, Bristol, 1988).
3. J. Higgins and H. Benoît, Polymers and Neutron Scattering (Oxford University Press, New York, 1994).
4. F. Gabel, D. Bicout, U. Lehnert, M. Tehei, M. Weik, and G. Zaccai, Q. Rev. Biophys. 35, 327 (2002). 10.1017/S0033583502003840
5. J. Boon and S. Yip, Molecular Hydrodynamics (McGraw Hill, New York, 1980).
6. H. Hartmann, F. Parak, W. Steigemann, G. Petsko, D. Ponzi, and H. Frauenfelder, Proc. Natl. Acad. Sci. U.S.A. 79, 4967 (1982). 10.1073/pnas.79.16.4967
7. K. H. Mayo, D. Kucheida, F. Parak, and J. C. Chien, Proc. Natl. Acad. Sci. U.S.A. 80, 5294 (1983). 10.1073/pnas.80.17.5294
8. W. Doster, S. Cusack, and W. Petry, Nature (London) 337, 754 (1989). 10.1038/337754a0
9. G. Zaccai, Science 288, 1604 (2000). 10.1126/science.288.5471.1604
10. T. Ichiye and M. Karplus, Proteins 2, 236 (1987). 10.1002/prot.340020308
11. A. Tokuhisa, Y. Joti, H. Nakagawa, A. Kitao, and M. Kataoka, Phys. Rev. E 75, 041912 (2007). 10.1103/PhysRevE.75.041912
12. L. Meinhold, D. Clement, M. Tehei, R. Daniel, J. Finney, and J. Smith, Biophys. J. 94, 4812 (2008). 10.1529/biophysj.107.121418
13. G. R. Kneller and K. Hinsen, J. Chem. Phys. 131, 045104 (2009). 10.1063/1.3170941
14. Z. Yi, Y. Miao, J. Baudry, N. Jain, and J. C. Smith, J. Phys. Chem. B 116, 5028 (2012). 10.1021/jp2102868
15. C. J. Burden and A. J. Oakley, Phys. Biol. 4, 79 (2007). 10.1088/1478-3975/4/2/002
16. K. Hinsen, Bioinformatics 24, 521 (2008). 10.1093/bioinformatics/btm625
17. C. C. Wilson, Crystallogr. Rev. 15, 3 (2009). 10.1080/08893110802564245
18. G. R. Kneller, Mol. Phys. 83, 63 (1994). 10.1080/00268979400101081
19. NIST Handbook of Mathematical Functions, edited by, F. W. J. Olver, D. W. Lozier, R. F. Boisvert, and, C. W. Clark, (Cambridge University Press, 2010).
20. M. Rose, Proc. Phys. Soc., London, Sect. A 67, 239 (1954). 10.1088/0370-1298/67/3/307
21. A. Edmonds, Angular Momentum in Quantum Mechanics (Princeton University Press, Princeton, NJ, 1957).
22. A. Rahman, K. Singwi, and A. Sjölander, Phys. Rev. 126, 986 (1962). 10.1103/PhysRev.126.986
23. MATHEMATICA 8.0 (Wolfram Research, Inc., Champaign, IL, 2011).
24. N. Niimura, Y. Minezaki, T. Nonaka, J. C. Castagna, F. Cipriani, P. Hoghoj, M. S. Lehmann, and C. Wilkinson, Nat. Struct. Biol. 4, 909 (1997). 10.1038/nsb1197-909
25. K. Hinsen, J. Comput. Chem. 21, 79 (2000). 10.1002/(SICI)1096- 987X(20000130)21:2<79::AID-JCC1>3.0.CO;2-B
26. J. Wang, P. Cieplak, and P. Kollman, J. Comput. Chem. 21, 1049 (2000). 10.1002/1096-987X(200009)21:12<1049::AID-JCC3>3.0.CO;2-F
27. D. Wolf, P. Keblinski, S. R. Phillpot, and J. Eggebrecht, J. Chem. Phys. 110, 8254 (1999). 10.1063/1.478738
28. S. Nosé, J. Chem. Phys. 81 (1), 511 (1984). 10.1063/1.447334
29. T. Rog, K. Murzyn, K. Hinsen, and G. R. Kneller, J. Comput. Chem. 24, 657 (2003). 10.1002/jcc.10243