-
1
-
-
69749099417
-
Fast model-based estimation of ancestry in unrelated individuals
-
Alexander DH, Novembre J, Lange K. 2009. Fast model-based estimation of ancestry in unrelated individuals. Genome Res 19(9):1655-1664.
-
(2009)
Genome Res
, vol.19
, Issue.9
, pp. 1655-1664
-
-
Alexander, D.H.1
Novembre, J.2
Lange, K.3
-
2
-
-
77955166399
-
Population structure and cryptic relatedness in genetic association studies
-
Astle W, Balding D. 2009. Population structure and cryptic relatedness in genetic association studies. Stat Sci 24(4):451-471.
-
(2009)
Stat Sci
, vol.24
, Issue.4
, pp. 451-471
-
-
Astle, W.1
Balding, D.2
-
3
-
-
73949122747
-
Results from a prostate cancer admixture mapping study in African-American men
-
others.
-
Bock C, Schwartz A, Ruterbusch J, Levin A, Neslund-Dudas C, Land S, Wenzlaff A, Reich D, Mckeigue P, Chen W and others. 2009. Results from a prostate cancer admixture mapping study in African-American men. Hum Genet 126(5):637-642.
-
(2009)
Hum Genet
, vol.126
, Issue.5
, pp. 637-642
-
-
Bock, C.1
Schwartz, A.2
Ruterbusch, J.3
Levin, A.4
Neslund-Dudas, C.5
Land, S.6
Wenzlaff, A.7
Reich, D.8
Mckeigue, P.9
Chen, W.10
-
4
-
-
76249102674
-
Genome-wide patterns of population structure and admixture in West Africans and African Americans
-
others.
-
Bryc K, Auton A, Nelson MR, Oksenberg JR, Hauser SL, Williams S, Froment A, Bodo JM, Wambebe C, Tishkoff SA and others. 2010a. Genome-wide patterns of population structure and admixture in West Africans and African Americans. Proc Natl Acad Sci USA 107(2):786-791.
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, Issue.2
, pp. 786-791
-
-
Bryc, K.1
Auton, A.2
Nelson, M.R.3
Oksenberg, J.R.4
Hauser, S.L.5
Williams, S.6
Froment, A.7
Bodo, J.M.8
Wambebe, C.9
Tishkoff, S.A.10
-
5
-
-
77952324523
-
Genome-wide patterns of population structure and admixture among Hispanic/Latino populations
-
Bryc K, Velez C, Karafet T, Moreno-Estrada A, Reynolds A, Auton A, Hammer M, Bustamante CD, Ostrer H. 2010b. Genome-wide patterns of population structure and admixture among Hispanic/Latino populations. Proc Natl Acad Sci USA 107(Suppl. 2):8954-8961.
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, Issue.SUPPL. 2
, pp. 8954-8961
-
-
Bryc, K.1
Velez, C.2
Karafet, T.3
Moreno-Estrada, A.4
Reynolds, A.5
Auton, A.6
Hammer, M.7
Bustamante, C.D.8
Ostrer, H.9
-
6
-
-
0037066430
-
A human genome diversity cell line panel
-
others.
-
Cann HM, de Toma C, Cazes L, Legrand MF, Morel V, Piouffre L, Bodmer J, Bodmer WF, Bonne-Tamir B, Cambon-Thomsen A and others. 2002. A human genome diversity cell line panel. Science 296(5566):261-262.
-
(2002)
Science
, vol.296
, Issue.5566
, pp. 261-262
-
-
Cann, H.M.1
de Toma, C.2
Cazes, L.3
Legrand, M.F.4
Morel, V.5
Piouffre, L.6
Bodmer, J.7
Bodmer, W.F.8
Bonne-Tamir, B.9
Cambon-Thomsen, A.10
-
8
-
-
0001626339
-
A classification EM algorithm for clustering and two stochastic versions
-
Celeux G, Govaert G. 1992. A classification EM algorithm for clustering and two stochastic versions. Comput Stat Data Anal 14(3):315-332.
-
(1992)
Comput Stat Data Anal
, vol.14
, Issue.3
, pp. 315-332
-
-
Celeux, G.1
Govaert, G.2
-
9
-
-
67149130298
-
Admixture mapping of 15,280 African Americans identifies obesity susceptibility loci on chromosomes 5 and X
-
others.
-
Cheng CY, Kao WHL, Patterson N, Tandon A, Haiman CA, Harris TB, Xing C, John EM, Ambrosone CB, Brancati FL and others. 2009. Admixture mapping of 15, 280 African Americans identifies obesity susceptibility loci on chromosomes 5 and X. PLoS Genet 5(5):e1000490.
-
(2009)
PLoS Genet
, vol.5
, Issue.5
-
-
Cheng, C.Y.1
Kao, W.H.L.2
Patterson, N.3
Tandon, A.4
Haiman, C.A.5
Harris, T.B.6
Xing, C.7
John, E.M.8
Ambrosone, C.B.9
Brancati, F.L.10
-
10
-
-
77249160162
-
Admixture mapping of obesity-related traits in African Americans: the Atherosclerosis Risk in Communities (ARIC) Study
-
others.
-
Cheng CY, Reich D, Coresh J, Boerwinkle E, Patterson N, Li M, North KE, Tandon A, Bailey-Wilson JE, Wilson JG and others. 2010. Admixture mapping of obesity-related traits in African Americans: the Atherosclerosis Risk in Communities (ARIC) Study. Obesity 18(3):563-572.
-
(2010)
Obesity
, vol.18
, Issue.3
, pp. 563-572
-
-
Cheng, C.Y.1
Reich, D.2
Coresh, J.3
Boerwinkle, E.4
Patterson, N.5
Li, M.6
North, K.E.7
Tandon, A.8
Bailey-Wilson, J.E.9
Wilson, J.G.10
-
11
-
-
77956491134
-
Using environmental correlations to identify loci underlying local adaptation
-
Coop G, Witonsky D, Rienzo AD, Pritchard JK. 2010. Using environmental correlations to identify loci underlying local adaptation. Genetics 185(4):1411-1423.
-
(2010)
Genetics
, vol.185
, Issue.4
, pp. 1411-1423
-
-
Coop, G.1
Witonsky, D.2
Rienzo, A.D.3
Pritchard, J.K.4
-
12
-
-
84856478855
-
A linear complexity phasing method for thousands of genomes
-
Delaneau O, Marchini J, Zagury JF. 2012. A linear complexity phasing method for thousands of genomes. Nat Methods 9(2):179-181.
-
(2012)
Nat Methods
, vol.9
, Issue.2
, pp. 179-181
-
-
Delaneau, O.1
Marchini, J.2
Zagury, J.F.3
-
13
-
-
63249088190
-
Genome-wide linkage and admixture mapping of type 2 diabetes in African American families from the American Diabetes Association GENNID study cohort
-
Elbein SC, Das SK, Hallman MD, Hanis CL, Hasstedt SJ. 2009. Genome-wide linkage and admixture mapping of type 2 diabetes in African American families from the American Diabetes Association GENNID study cohort. Diabetes 5(1):268-274.
-
(2009)
Diabetes
, vol.5
, Issue.1
, pp. 268-274
-
-
Elbein, S.C.1
Das, S.K.2
Hallman, M.D.3
Hanis, C.L.4
Hasstedt, S.J.5
-
14
-
-
0041817568
-
Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies
-
Falush D, Stephens M, Pritchard JK. 2003. Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies. Genetics 164(4):1567-1587.
-
(2003)
Genetics
, vol.164
, Issue.4
, pp. 1567-1587
-
-
Falush, D.1
Stephens, M.2
Pritchard, J.K.3
-
15
-
-
72749125457
-
An admixture scan in 1,484 African American women with breast cancer
-
others.
-
Fejerman L, Haiman CA, Reich D, Tandon A, Deo RC, John EM, Ingles SA, Ambrosone CB, Bovbjerg DH, Jandorf LH and others. 2009. An admixture scan in 1, 484 African American women with breast cancer. Cancer Epidemiol Biomarkers Prev 18(11):3110-3117.
-
(2009)
Cancer Epidemiol Biomarkers Prev
, vol.18
, Issue.11
, pp. 3110-3117
-
-
Fejerman, L.1
Haiman, C.A.2
Reich, D.3
Tandon, A.4
Deo, R.C.5
John, E.M.6
Ingles, S.A.7
Ambrosone, C.B.8
Bovbjerg, D.H.9
Jandorf, L.H.10
-
16
-
-
33749003979
-
Admixture mapping identifies 8q24 as a prostate cancer risk locus in African-American men
-
others.
-
Freedman ML, Haiman CA, Patterson N, Mcdonald GJ, Tandon A, Waliszewska A, Penney K, Steen RG, Ardlie K, John EM and others. 2006. Admixture mapping identifies 8q24 as a prostate cancer risk locus in African-American men. PNAS 103(38):14068-14073.
-
(2006)
PNAS
, vol.103
, Issue.38
, pp. 14068-14073
-
-
Freedman, M.L.1
Haiman, C.A.2
Patterson, N.3
Mcdonald, G.J.4
Tandon, A.5
Waliszewska, A.6
Penney, K.7
Steen, R.G.8
Ardlie, K.9
John, E.M.10
-
17
-
-
80051679387
-
The landscape of recombination in African Americans
-
others.
-
Hinch A, Tandon A, Patterson N, Song Y, Rohland N, Palmer CD, Chen GK, Wang K, Buxbaum SG, Akylbekova EL and others. 2011. The landscape of recombination in African Americans. Nature 476(7359):170-175.
-
(2011)
Nature
, vol.476
, Issue.7359
, pp. 170-175
-
-
Hinch, A.1
Tandon, A.2
Patterson, N.3
Song, Y.4
Rohland, N.5
Palmer, C.D.6
Chen, G.K.7
Wang, K.8
Buxbaum, S.G.9
Akylbekova, E.L.10
-
18
-
-
84863845193
-
Genotype imputation with thousands of genomes
-
Howie B, Marchini J, Stephens M. 2011. Genotype imputation with thousands of genomes. G3: Genes, Genomes, Genetics 1(6):457-470.
-
(2011)
G3: Genes, Genomes, Genetics
, vol.1
, Issue.6
, pp. 457-470
-
-
Howie, B.1
Marchini, J.2
Stephens, M.3
-
19
-
-
67651222400
-
A flexible and accurate genotype imputation method for the next generation of genome-wide association studies
-
Howie BN, Donnelly P, Marchini J. 2009. A flexible and accurate genotype imputation method for the next generation of genome-wide association studies. PLoS Genet 5(6):e1000529.
-
(2009)
PLoS Genet
, vol.5
, Issue.6
-
-
Howie, B.N.1
Donnelly, P.2
Marchini, J.3
-
20
-
-
52949092735
-
MYH9 is associated with nondiabetic end-stage renal disease in African Americans
-
others.
-
Kao LH, Klag MJ, Meoni LA, Reich D, Berthier-Schaad Y, Li M, Coresh J, Patterson N, Tandon A, Powe NR and others. 2008. MYH9 is associated with nondiabetic end-stage renal disease in African Americans. Nat Genet 40(10):1185-1192.
-
(2008)
Nat Genet
, vol.40
, Issue.10
, pp. 1185-1192
-
-
Kao, L.H.1
Klag, M.J.2
Meoni, L.A.3
Reich, D.4
Berthier-Schaad, Y.5
Li, M.6
Coresh, J.7
Patterson, N.8
Tandon, A.9
Powe, N.R.10
-
21
-
-
0347361674
-
Modeling linkage disequilibrium and identifying recombination hotspots using single-nucleotide polymorphism data
-
Li N, Stephens M. 2003. Modeling linkage disequilibrium and identifying recombination hotspots using single-nucleotide polymorphism data. Genetics 165(4):2213-2233.
-
(2003)
Genetics
, vol.165
, Issue.4
, pp. 2213-2233
-
-
Li, N.1
Stephens, M.2
-
22
-
-
0036435078
-
Assessing population differentiation and isolation from single-nucleotide polymorphism data
-
Nicholson G, Smith AV, Jónsson F, Gústafsson, Stefánsson K, Donnelly P. 2002. Assessing population differentiation and isolation from single-nucleotide polymorphism data. J R Stat Soc Series B Stat Methodol 64(4):695-715.
-
(2002)
J R Stat Soc Series B Stat Methodol
, vol.64
, Issue.4
, pp. 695-715
-
-
Nicholson, G.1
Smith, A.V.2
Jónsson, F.3
Gústafsson4
Stefánsson, K.5
Donnelly, P.6
-
24
-
-
2342622086
-
Methods for high-density admixture mapping of disease genes
-
Patterson N, Hattangadi N, Lane B, Lohmueller K, Hafler D, Oksenberg J, Hauser S, Smith M, Obrien S, Altshuler D. 2004. Methods for high-density admixture mapping of disease genes. Am J Hum Genet 74(5):979-1000.
-
(2004)
Am J Hum Genet
, vol.74
, Issue.5
, pp. 979-1000
-
-
Patterson, N.1
Hattangadi, N.2
Lane, B.3
Lohmueller, K.4
Hafler, D.5
Oksenberg, J.6
Hauser, S.7
Smith, M.8
Obrien, S.9
Altshuler, D.10
-
25
-
-
67651225410
-
Sensitive detection of chromosomal segments of distinct ancestry in admixed population
-
Price AL, Tandon A, Patterson N, Barnes KC, Rafaels N, Ruczinski I, Beaty TH, Mathias R, Reich D, Myers S. 2009. Sensitive detection of chromosomal segments of distinct ancestry in admixed population. PLoS Genet 5(6):e1000519.
-
(2009)
PLoS Genet
, vol.5
, Issue.6
-
-
Price, A.L.1
Tandon, A.2
Patterson, N.3
Barnes, K.C.4
Rafaels, N.5
Ruczinski, I.6
Beaty, T.H.7
Mathias, R.8
Reich, D.9
Myers, S.10
-
26
-
-
46149098096
-
Long-range LD can confound genome scans in admixed populations
-
others.
-
Price AL, Weale ME, Patterson N, Myers SR, Need AC, Shianna KV, Ge D, Rotter JI, Torres E, Taylor KD and others. 2008. Long-range LD can confound genome scans in admixed populations. Am J Hum Genet 83(1):132-135.
-
(2008)
Am J Hum Genet
, vol.83
, Issue.1
, pp. 132-135
-
-
Price, A.L.1
Weale, M.E.2
Patterson, N.3
Myers, S.R.4
Need, A.C.5
Shianna, K.V.6
Ge, D.7
Rotter, J.I.8
Torres, E.9
Taylor, K.D.10
-
27
-
-
0034118493
-
Inference of population structure using multilocus genotype data
-
Pritchard JK, Stephens M, Donnelly P. 2000. Inference of population structure using multilocus genotype data. Genetics 155(2):945-959.
-
(2000)
Genetics
, vol.155
, Issue.2
, pp. 945-959
-
-
Pritchard, J.K.1
Stephens, M.2
Donnelly, P.3
-
29
-
-
41649121004
-
On the inference of ancestries in admixed populations
-
Sankararaman S, Kimmel G, Halperin E, Jordan MI. 2008a. On the inference of ancestries in admixed populations. Genome Res 18(4):668-675.
-
(2008)
Genome Res
, vol.18
, Issue.4
, pp. 668-675
-
-
Sankararaman, S.1
Kimmel, G.2
Halperin, E.3
Jordan, M.I.4
-
30
-
-
40749114839
-
Estimating local ancestry in admixed populations
-
Sankararaman S, Sridhar S, Kimmel G, Halperin E. 2008b. Estimating local ancestry in admixed populations. Am J Hum Genet 82(2):290-303.
-
(2008)
Am J Hum Genet
, vol.82
, Issue.2
, pp. 290-303
-
-
Sankararaman, S.1
Sridhar, S.2
Kimmel, G.3
Halperin, E.4
-
31
-
-
41649089607
-
Effect of genetic divergence in identifying ancestral origin using HAPAA
-
Sundquist A, Fratkin E, Do C, Batzoglou S. 2008. Effect of genetic divergence in identifying ancestral origin using HAPAA. Genome Res 18(4):676-682.
-
(2008)
Genome Res
, vol.18
, Issue.4
, pp. 676-682
-
-
Sundquist, A.1
Fratkin, E.2
Do, C.3
Batzoglou, S.4
-
32
-
-
33745228973
-
Reconstructing genetic ancestry blocks in admixed individuals
-
Tang H, Coram M, Wang P, Zhu X, Risch N. 2006. Reconstructing genetic ancestry blocks in admixed individuals. Am J Hum Genet 79(1):1-12.
-
(2006)
Am J Hum Genet
, vol.79
, Issue.1
, pp. 1-12
-
-
Tang, H.1
Coram, M.2
Wang, P.3
Zhu, X.4
Risch, N.5
-
33
-
-
17644402806
-
Estimation of individual admixture: analytical and study design considerations
-
Tang H, Peng J, Wang P, Risch NJ. 2005. Estimation of individual admixture: analytical and study design considerations. Genet Epidemiol 28(4):289-301.
-
(2005)
Genet Epidemiol
, vol.28
, Issue.4
, pp. 289-301
-
-
Tang, H.1
Peng, J.2
Wang, P.3
Risch, N.J.4
-
34
-
-
84975795680
-
An integrated map of genetic variation from 1,092 human genomes
-
The 1000 Genomes Project Consortium. Nature, in press.
-
The 1000 Genomes Project Consortium. 2012. An integrated map of genetic variation from 1, 092 human genomes. Nature, in press.
-
(2012)
-
-
-
35
-
-
79959524146
-
A haplotype map of the human genome
-
The International Hapmap Consortium. 2005. A haplotype map of the human genome. Nature 437(7063):1299-1320.
-
(2005)
Nature
, vol.437
, Issue.7063
, pp. 1299-1320
-
-
The, I.H.C.1
-
36
-
-
35348983887
-
A second generation human haplotype map of over 3.1 million SNPs
-
The International Hapmap Consortium. 2007. A second generation human haplotype map of over 3.1 million SNPs. Nature 449(7164):851-861.
-
(2007)
Nature
, vol.449
, Issue.7164
, pp. 851-861
-
-
The, I.H.C.1
-
37
-
-
77956331627
-
Integrating common and rare genetic variation in diverse human populations
-
The International HapMap 3 Consortium. 2010. Integrating common and rare genetic variation in diverse human populations. Nature 467(7311):52-58.
-
(2010)
Nature
, vol.467
, Issue.7311
, pp. 52-58
-
-
The, I.H.3.C.1
-
38
-
-
80052249755
-
Recombination rates in admixed individuals identified by ancestry-based inference
-
others.
-
Wegmann D, Kessner D, Veeramah K, Mathias R, Nicolae D, Yanek L, Sun Y, Torgerson D, Rafaels N, Mosley T and others. 2011. Recombination rates in admixed individuals identified by ancestry-based inference. Nat Genet 43(9):847-853.
-
(2011)
Nat Genet
, vol.43
, Issue.9
, pp. 847-853
-
-
Wegmann, D.1
Kessner, D.2
Veeramah, K.3
Mathias, R.4
Nicolae, D.5
Yanek, L.6
Sun, Y.7
Torgerson, D.8
Rafaels, N.9
Mosley, T.10
-
39
-
-
84861461948
-
Using linear predictors to impute allele frequencies from summary or pooled genotype data
-
Wen X, Stephens M. 2010. Using linear predictors to impute allele frequencies from summary or pooled genotype data. Ann App Stat 4(3):1158-1182.
-
(2010)
Ann App Stat
, vol.4
, Issue.3
, pp. 1158-1182
-
-
Wen, X.1
Stephens, M.2
-
40
-
-
44249128395
-
Admixture mapping provides evidence of association of the VNN1 gene with hypertension
-
Zhu X, Cooper RS. 2007. Admixture mapping provides evidence of association of the VNN1 gene with hypertension. PLoS One 2(11):e1244.
-
(2007)
PLoS One
, vol.2
, Issue.11
-
-
Zhu, X.1
Cooper, R.S.2
-
41
-
-
13944250687
-
Admixture mapping for hypertension loci with genome-scan markers
-
others.
-
Zhu X, Luke A, Cooper RS, Quertermous T, Hanis C, Mosley T, Gu CC, Tang H, Rao DC, Risch N and others. 2005. Admixture mapping for hypertension loci with genome-scan markers. Nat Genet 37(2):177-181.
-
(2005)
Nat Genet
, vol.37
, Issue.2
, pp. 177-181
-
-
Zhu, X.1
Luke, A.2
Cooper, R.S.3
Quertermous, T.4
Hanis, C.5
Mosley, T.6
Gu, C.C.7
Tang, H.8
Rao, D.C.9
Risch, N.10
|