메뉴 건너뛰기




Volumn 129, Issue , 2013, Pages 209-218

Metagenomic analysis reveals the prevalence of biodegradation genes for organic pollutants in activated sludge

Author keywords

Activated sludge; Biodegradation genes; High throughput sequencing; Metagenomic analysis; Organic pollutants

Indexed keywords

GENES; MICROBIOLOGY; ORGANIC POLLUTANTS; PHENOLS; POLLUTION DETECTION; WASTEWATER TREATMENT;

EID: 84870859829     PISSN: 09608524     EISSN: 18732976     Source Type: Journal    
DOI: 10.1016/j.biortech.2012.11.054     Document Type: Article
Times cited : (74)

References (35)
  • 3
    • 62649147801 scopus 로고    scopus 로고
    • Bioaugmentation of activated sludge towards 3-chloroaniline removal with a mixed bacterial population carrying a degradative plasmid
    • Bathe S., Schwarzenbeck N., Hausner M. Bioaugmentation of activated sludge towards 3-chloroaniline removal with a mixed bacterial population carrying a degradative plasmid. Bioresour. Technol. 2009, 100:2902-2909.
    • (2009) Bioresour. Technol. , vol.100 , pp. 2902-2909
    • Bathe, S.1    Schwarzenbeck, N.2    Hausner, M.3
  • 4
    • 0033779946 scopus 로고    scopus 로고
    • Microbial degradation of the multiply branched alkane 2,6,10,15,19,23-hexamethyltetracosane (squalane) by Mycobacterium fortuitum and Mycobacterium ratisbonense
    • Berekaa M.M., Steinbuchel A. Microbial degradation of the multiply branched alkane 2,6,10,15,19,23-hexamethyltetracosane (squalane) by Mycobacterium fortuitum and Mycobacterium ratisbonense. Appl. Environ. Microbiol. 2000, 66:4462-4467.
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 4462-4467
    • Berekaa, M.M.1    Steinbuchel, A.2
  • 6
    • 79952086411 scopus 로고    scopus 로고
    • Acidobacteria, Rubrobacteridae and Chloroflexi are abundant among very slow-growing and mini-colony-forming soil bacteria
    • Davis K.E., Sangwan P., Janssen P.H. Acidobacteria, Rubrobacteridae and Chloroflexi are abundant among very slow-growing and mini-colony-forming soil bacteria. Environ. Microbiol. 2011, 13:798-805.
    • (2011) Environ. Microbiol. , vol.13 , pp. 798-805
    • Davis, K.E.1    Sangwan, P.2    Janssen, P.H.3
  • 7
    • 69949095770 scopus 로고    scopus 로고
    • Metagenomic approach studying the taxonomic and functional diversity of the bacterial community in a mesotrophic lake (Lac du Bourget - France)
    • Debroas D., Humbert J.F., Enault F., Bronner G., Faubladier M., Cornillot E. Metagenomic approach studying the taxonomic and functional diversity of the bacterial community in a mesotrophic lake (Lac du Bourget - France). Environ. Microbiol. 2009, 11:2412-2424.
    • (2009) Environ. Microbiol. , vol.11 , pp. 2412-2424
    • Debroas, D.1    Humbert, J.F.2    Enault, F.3    Bronner, G.4    Faubladier, M.5    Cornillot, E.6
  • 8
    • 76049112484 scopus 로고    scopus 로고
    • Polyphasic bacterial community analysis of an aerobic activated sludge removing phenols and thiocyanate from coke plant effluent
    • Felfoldi T., Szekely A.J., Goral R., Barkacs K., Scheirich G., Andras J., Racz A., Marialigeti K. Polyphasic bacterial community analysis of an aerobic activated sludge removing phenols and thiocyanate from coke plant effluent. Bioresour. Technol. 2010, 101:3406-3414.
    • (2010) Bioresour. Technol. , vol.101 , pp. 3406-3414
    • Felfoldi, T.1    Szekely, A.J.2    Goral, R.3    Barkacs, K.4    Scheirich, G.5    Andras, J.6    Racz, A.7    Marialigeti, K.8
  • 9
    • 75549089640 scopus 로고    scopus 로고
    • The University of Minnesota Biocatalysis/Biodegradation Database: improving public access
    • Gao J., Ellis L.B.M., Wackett L.P. The University of Minnesota Biocatalysis/Biodegradation Database: improving public access. Nucleic Acids Res. 2010, 38:D488-D491.
    • (2010) Nucleic Acids Res. , vol.38
    • Gao, J.1    Ellis, L.B.M.2    Wackett, L.P.3
  • 10
    • 79551501375 scopus 로고    scopus 로고
    • Linking low-level stable isotope fractionation to expression of the cytochrome P450 monooxygenase-encoding ethB gene for elucidation of methyl tert-butyl ether biodegradation in aerated treatment pond systems
    • Jechalke S., Rosell M., Martinez-Lavanchy P.M., Perez-Leiva P., Rohwerder T., Vogt C., Richnow H.H. Linking low-level stable isotope fractionation to expression of the cytochrome P450 monooxygenase-encoding ethB gene for elucidation of methyl tert-butyl ether biodegradation in aerated treatment pond systems. Appl. Environ. Microbiol. 2011, 77:1086-1096.
    • (2011) Appl. Environ. Microbiol. , vol.77 , pp. 1086-1096
    • Jechalke, S.1    Rosell, M.2    Martinez-Lavanchy, P.M.3    Perez-Leiva, P.4    Rohwerder, T.5    Vogt, C.6    Richnow, H.H.7
  • 11
    • 33750738580 scopus 로고    scopus 로고
    • Physiological, biochemical, and genetic characterization of an alicyclic amine-degrading Mycobacterium sp. strain THO100 isolated from a morpholine-containing culture of activated sewage sludge
    • Kim Y.H., Kang I., Bergeron H., Lau P.C.K., Engesser K.H., Kim S.J. Physiological, biochemical, and genetic characterization of an alicyclic amine-degrading Mycobacterium sp. strain THO100 isolated from a morpholine-containing culture of activated sewage sludge. Arch. Microbiol. 2006, 186:425-434.
    • (2006) Arch. Microbiol. , vol.186 , pp. 425-434
    • Kim, Y.H.1    Kang, I.2    Bergeron, H.3    Lau, P.C.K.4    Engesser, K.H.5    Kim, S.J.6
  • 13
    • 80054002022 scopus 로고    scopus 로고
    • Biodegradation of vinyl chloride, cis-dichloroethene and 1,2-dichloroethane in the alkene/alkane-oxidising Mycobacterium strain NBB4
    • Le N.B., Coleman N.V. Biodegradation of vinyl chloride, cis-dichloroethene and 1,2-dichloroethane in the alkene/alkane-oxidising Mycobacterium strain NBB4. Biodegradation 2011, 22:1095-1108.
    • (2011) Biodegradation , vol.22 , pp. 1095-1108
    • Le, N.B.1    Coleman, N.V.2
  • 14
    • 79251612187 scopus 로고    scopus 로고
    • Targeted gene disruption and functional complementation of cytochrome P450 hydroxylase involved in cyclosporin A hydroxylation in Sebekia benihana
    • Lee M.J., Han K.B., Kim E.S. Targeted gene disruption and functional complementation of cytochrome P450 hydroxylase involved in cyclosporin A hydroxylation in Sebekia benihana. J. Microbiol. Biotechnol. 2011, 21:14-19.
    • (2011) J. Microbiol. Biotechnol. , vol.21 , pp. 14-19
    • Lee, M.J.1    Han, K.B.2    Kim, E.S.3
  • 15
    • 78650815820 scopus 로고    scopus 로고
    • The characteristics and enzyme activities of 4-chlorophenol biodegradation by Fusarium sp.
    • Li J.W., Cai W.J., Zhu L. The characteristics and enzyme activities of 4-chlorophenol biodegradation by Fusarium sp. Bioresour. Technol. 2011, 102:2985-2989.
    • (2011) Bioresour. Technol. , vol.102 , pp. 2985-2989
    • Li, J.W.1    Cai, W.J.2    Zhu, L.3
  • 17
    • 38849160166 scopus 로고    scopus 로고
    • Biodegradation of pyrene by Mycobacterium frederiksbergense in a two-phase partitioning bioreactor system
    • Mahanty B., Pakshirajan K., Dasu V.V. Biodegradation of pyrene by Mycobacterium frederiksbergense in a two-phase partitioning bioreactor system. Bioresour. Technol. 2008, 99:2694-2698.
    • (2008) Bioresour. Technol. , vol.99 , pp. 2694-2698
    • Mahanty, B.1    Pakshirajan, K.2    Dasu, V.V.3
  • 18
    • 77950656086 scopus 로고    scopus 로고
    • Cytochromes P450-mediated degradation of fuel oxygenates by environmental isolates
    • Malandain C., Fayolle-Guichard F., Vogel T.M. Cytochromes P450-mediated degradation of fuel oxygenates by environmental isolates. FEMS Microbiol. Ecol. 2010, 72:289-296.
    • (2010) FEMS Microbiol. Ecol. , vol.72 , pp. 289-296
    • Malandain, C.1    Fayolle-Guichard, F.2    Vogel, T.M.3
  • 21
    • 84862835995 scopus 로고    scopus 로고
    • Biodegradation of 2-chlorophenol by Rhodopseudomonas palustris
    • Mutharasaiah K., Govindareddy V., Chandrakant K. Biodegradation of 2-chlorophenol by Rhodopseudomonas palustris. Biorem. J. 2012, 16:1-8.
    • (2012) Biorem. J. , vol.16 , pp. 1-8
    • Mutharasaiah, K.1    Govindareddy, V.2    Chandrakant, K.3
  • 22
    • 39149093982 scopus 로고    scopus 로고
    • Bioaugmentation of aerobic microbial granules with Pseudomonas putida carrying TOL plasmid
    • Nancharaiah V., Joshi H.M., Hausner M., Venugopalan V.P. Bioaugmentation of aerobic microbial granules with Pseudomonas putida carrying TOL plasmid. Chemosphere 2008, 71:30-35.
    • (2008) Chemosphere , vol.71 , pp. 30-35
    • Nancharaiah, V.1    Joshi, H.M.2    Hausner, M.3    Venugopalan, V.P.4
  • 23
    • 84860473244 scopus 로고    scopus 로고
    • Impact of treated wastewater irrigation on antibiotic resistance in agricultural soils
    • Negreanu Y., Pasternak Z., Jurkevitch E., Cytryn E. Impact of treated wastewater irrigation on antibiotic resistance in agricultural soils. Environ. Sci. Technol. 2012, 46:4800-4808.
    • (2012) Environ. Sci. Technol. , vol.46 , pp. 4800-4808
    • Negreanu, Y.1    Pasternak, Z.2    Jurkevitch, E.3    Cytryn, E.4
  • 24
    • 77952891740 scopus 로고    scopus 로고
    • Bioaugmentation of aerobic sludge granules with a plasmid donor strain for enhanced degradation of 2,4-dichlorophenoxyacetic acid
    • Quan X.C., Tang H., Xiong W.C., Yang Z.F. Bioaugmentation of aerobic sludge granules with a plasmid donor strain for enhanced degradation of 2,4-dichlorophenoxyacetic acid. J. Hazard. Mater. 2010, 179:1136-1142.
    • (2010) J. Hazard. Mater. , vol.179 , pp. 1136-1142
    • Quan, X.C.1    Tang, H.2    Xiong, W.C.3    Yang, Z.F.4
  • 27
    • 84870777134 scopus 로고    scopus 로고
    • Identification and distribution of high-abundance proteins in the Octopus Spring microbial mat community
    • Schaffert C.S., Klatt C.G., Ward D.M., Pauley M., Steinke L.A. Identification and distribution of high-abundance proteins in the Octopus Spring microbial mat community. Appl. Environ. Microbiol. 2012, 10.1128/AEM.01695-12.
    • (2012) Appl. Environ. Microbiol.
    • Schaffert, C.S.1    Klatt, C.G.2    Ward, D.M.3    Pauley, M.4    Steinke, L.A.5
  • 28
    • 84856567776 scopus 로고    scopus 로고
    • Identification and removal of ribosomal RNA sequences from metatranscriptomes
    • Schmieder R., Lim Y.W., Edwards R. Identification and removal of ribosomal RNA sequences from metatranscriptomes. Bioinformatics 2012, 28:433-435.
    • (2012) Bioinformatics , vol.28 , pp. 433-435
    • Schmieder, R.1    Lim, Y.W.2    Edwards, R.3
  • 29
  • 30
    • 34547748431 scopus 로고    scopus 로고
    • Functional screening of a metagenomic library for genes involved in microbial degradation of aromatic compounds
    • Suenaga H., Ohnuki T., Miyazaki K. Functional screening of a metagenomic library for genes involved in microbial degradation of aromatic compounds. Environ. Microbiol. 2007, 9:2289-2297.
    • (2007) Environ. Microbiol. , vol.9 , pp. 2289-2297
    • Suenaga, H.1    Ohnuki, T.2    Miyazaki, K.3
  • 31
    • 33846621913 scopus 로고    scopus 로고
    • Alkane hydroxylases involved in microbial alkane degradation
    • van Beilen J.B., Funhoff E.G. Alkane hydroxylases involved in microbial alkane degradation. Appl. Microbiol. Biotechnol. 2007, 74:13-21.
    • (2007) Appl. Microbiol. Biotechnol. , vol.74 , pp. 13-21
    • van Beilen, J.B.1    Funhoff, E.G.2
  • 32
    • 32044454655 scopus 로고    scopus 로고
    • Occurrence of Mycobacterium avium subsp. paratuberculosis in untreated water in Northern Ireland
    • Whan L., Ball H.J., Grant I.R., Rowe M.T. Occurrence of Mycobacterium avium subsp. paratuberculosis in untreated water in Northern Ireland. Appl. Environ. Microbiol. 2005, 71:7107-7112.
    • (2005) Appl. Environ. Microbiol. , vol.71 , pp. 7107-7112
    • Whan, L.1    Ball, H.J.2    Grant, I.R.3    Rowe, M.T.4
  • 33
    • 79751528166 scopus 로고    scopus 로고
    • The effects of nutrient amendment on biodegradation and cytochrome P450 activity of an n-alkane degrading strain of Burkholderia sp. GS3C
    • Wu R.R., Dang Z., Yi X.Y., Yang C., Lu G.N., Guo C.L., Liu C.Q. The effects of nutrient amendment on biodegradation and cytochrome P450 activity of an n-alkane degrading strain of Burkholderia sp. GS3C. J. Hazard. Mater. 2011, 186:978-983.
    • (2011) J. Hazard. Mater. , vol.186 , pp. 978-983
    • Wu, R.R.1    Dang, Z.2    Yi, X.Y.3    Yang, C.4    Lu, G.N.5    Guo, C.L.6    Liu, C.Q.7
  • 34
    • 84855714036 scopus 로고    scopus 로고
    • Metagenomic analysis of the bioremediation of diesel-contaminated Canadian high Arctic soils
    • Yergeau E., Sanschagrin S., Beaumier D., Greer C.W. Metagenomic analysis of the bioremediation of diesel-contaminated Canadian high Arctic soils. PLoS One 2012, 7:e30058.
    • (2012) PLoS One , vol.7
    • Yergeau, E.1    Sanschagrin, S.2    Beaumier, D.3    Greer, C.W.4
  • 35
    • 78650833792 scopus 로고    scopus 로고
    • Production of metabolites in the biodegradation of phenanthrene, fluoranthene and pyrene by the mixed culture of Mycobacterium sp. and Sphingomonas sp.
    • Zhong Y., Luan T.G., Lin L., Liu H., Tam N.F.Y. Production of metabolites in the biodegradation of phenanthrene, fluoranthene and pyrene by the mixed culture of Mycobacterium sp. and Sphingomonas sp. Bioresour. Technol. 2011, 102:2965-2972.
    • (2011) Bioresour. Technol. , vol.102 , pp. 2965-2972
    • Zhong, Y.1    Luan, T.G.2    Lin, L.3    Liu, H.4    Tam, N.F.Y.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.