Highly sensitive detection of telomerase activity in tumor cells by cascade isothermal signal amplification based on three-way junction and base-stacking hybridization

Biosensors and Bioelectronics

Volumn 41, Issue 1, 2013, Pages 764-770

  Zhao, Yongxi ^a   Qi, Lin ^a   Chen, Feng ^a   Zhao, Yue ^a   Fan, Chunhai ^b  

^a XI'AN JIAOTONG UNIVERSITY   (China)

^b SHANGHAI INSTITUTE OF APPLIED PHYSICS   (China)

Author keywords

Base stacking hybridization; Cascade isothermal signal amplification; Telomerase; Three way junction; Tumor cells

Indexed keywords

BASE-STACKING; SIGNAL AMPLIFICATIONS; TELOMERASE; THREE-WAY JUNCTION; TUMOR CELLS;

CELL CULTURE; DNA; FLUORESCENCE; ISOTHERMS; OLIGONUCLEOTIDES; SIGNAL PROCESSING; TUMORS;

DIAGNOSIS;

OLIGONUCLEOTIDE; SINGLE STRANDED DNA; TELOMERASE; DNA; CELL EXTRACT; ZIDOVUDINE;

3' UNTRANSLATED REGION; ARTICLE; CASCADE ISOTHERMAL SIGNAL AMPLIFICATION; ENZYME ACTIVITY; ENZYME ASSAY; ENZYME STABILITY; FLUORESCENCE ANALYSIS; GEL ELECTROPHORESIS; GENE AMPLIFICATION; GENE REPLICATION; GENE SEQUENCE; HYBRIDIZATION; MOLECULAR BEACON; MOLECULAR PROBE; PROCESS DEVELOPMENT; STACKING HYBRIDIZATION; TUMOR CELL; CHEMISTRY; ENZYME ACTIVATION; EQUIPMENT; EQUIPMENT DESIGN; EQUIPMENT FAILURE; FLUORESCENCE IN SITU HYBRIDIZATION; GENETICS; HEAT; HELA CELL; HUMAN; METHODOLOGY; MOLECULAR GENETICS; NUCLEIC ACID AMPLIFICATION; NUCLEOTIDE SEQUENCE; REPRODUCIBILITY; SENSITIVITY AND SPECIFICITY; BASE STACKING HYBRIDIZATION ASSISTED BIOLOGICAL CIRCUIT DNA MACHINE; BIOSENSOR; CONTROLLED STUDY; DNA REPLICATION; DNA SEQUENCE; DNA STRAND; FEASIBILITY STUDY; HUMAN CELL; INTERMETHOD COMPARISON; ISOTHERMAL SIGNAL AMPLICATION PROCESS; MOLECULAR STABILITY; SENSITIVITY ANALYSIS; SOMATIC CELL; THREE WAY JUNCTION TRIGGERED DNA MACHINE;

BASE SEQUENCE; DNA; ENZYME ACTIVATION; EQUIPMENT DESIGN; EQUIPMENT FAILURE ANALYSIS; HELA CELLS; HOT TEMPERATURE; HUMANS; IN SITU HYBRIDIZATION, FLUORESCENCE; MOLECULAR SEQUENCE DATA; NUCLEIC ACID AMPLIFICATION TECHNIQUES; REPRODUCIBILITY OF RESULTS; SENSITIVITY AND SPECIFICITY; TELOMERASE;

EID: 84870839885     PISSN: 09565663     EISSN: 18734235     Source Type: Journal    
DOI: 10.1016/j.bios.2012.10.009     Document Type: Article

References (43)

1. Atha D.H., Miller K., Sanow A.D., Xu J., Hess J.L., Wu O.C., Wang W., Srivastava S., Highsmith W.E. Electrophoresis 2003, 24:109-114.
2. Blackburn E.H. Nature 1991, 350:569-573.
3. Cohen S.B., Graham M.E., Lovrecz G.O., Bache N., Robinson P.J., Reddel R.R. Science 2007, 315:1850-1853.
4. De Cian A., Cristofari G., Reichenbach P., De Lemos E., Monchaud D., Teulade-Fichou M.P., Shin-ya K., Lacroix L., Lingner J., Mergny J.L. Proceedings of the National Academy of Sciences of the United States of America 2007, 104:17347-17352.
5. Ding C., Li X., Ge Y., Zhang S. Analytical Chemistry 2010, 82:2850-2855.
6. Eskiocak U., Ozkan-Ariksoysal D., Ozsoz M., Öktem H.A. Analytical Chemistry 2007, 79:8807-8811.
7. Greider C.W. Proceedings of the National Academy of Sciences of the United States of America 1998, 95:90-92.
8. Hou M., Xu D., Björkholm M., Gruber A. Clinical Chemistry 2001, 47:519-524.
9. Jia H., Li Z., Liu C., Cheng Y. Angewandate Chemie International Edition 2010, 49:5498-5501.
10. Kim N.W., Piatyszek M.A., Prowse K.R., Harley C.B., West M.D., Ho P.L., Coviello G.M., Wright W.E., Weinrich S.L., Shay J.W. Science 1994, 266:2011-2015.
11. Kim N.W., Wu F. Nucleic Acids Research 1997, 25:2595-2597.
12. Kong R.M., Zhang X.B., Zhang L.L., Huang Y., Lu D.Q., Tan W., Shen G.L., Yu R.Q. Analytical Chemistry 2011, 83:14-17.
13. Li D., Wieckowska A., Willner I. Angewandate Chemie International Edition 2008, 120:3991-3995.
14. Li Y., Li X., Ji X. Biosensors and Bioelectronics 2011, 26:4095-4098.
15. Lu Z., Duan D., Cao R., Zhang L., Zheng K., Li J. Chemical Communications 2011, 47:7452-7454.
16. Ma C., Zhao C., Ge Y., Shi C. Clinical Chemistry 2012, 58:384-390.
17. Mergny J.L., Riou J.F., Mailliet P., Teulade-Fichou M.P., Gilson E. Nucleic Acids Research 2002, 30:839-865.
18. Morin G.B. Cell 1989, 59:521-529.
19. Murakami T., Sumaoka J., Komiyama M. Nucleic Acids Research 2012, 40:e22.
20. Niazov T., Pavlov V., Xiao Y., Gill R., Willner I. Nano Letters 2004, 4:1683-1687.
21. Niemeyer C.M., Adler M., Wacker R. Trends in Biotechnology 2005, 23:208-216.
22. Niemz A., Ferguson T.M., Boyle D.S. Trends in Biotechnology 2011, 29:240-250.
23. Öztürk K., Durusoy M., Pişkin E.J. Bioactive and Compatible Polymers 2008, 23:579-593.
24. Peng L., Zhu Z., Chen Y., Han D., Tan W. Biosensors and Bioelectronics 2012, 35:475-478.
25. Qian J., Ferguson T.M., Shinde D.N., Ramírez-Borrero A.J., Hintze A., Adami C., Niemz A. Nucleic Acids Research 2012, 40:e87.
26. Shao Z., Liu Y., Xiao H., Li G. Electrochemistry Communications 2008, 10:1502-1504.
27. Sharon E., Freeman R., Riskin M., Gil N., Tzfati Y., Willner I. Analytical Chemistry 2010, 82:8390-8397.
28. Shay J., Bacchetti S. European Journal of Cancer 1997, 33:787-791.
29. Shay J.W., Wright W.E. Cancer Cell 2002, 2:257-265.
30. Shlyahovsky B., Li D., Weizmann Y., Nowarski R., Kotler M., Willner I. Journal of the American Chemical Society 2007, 129:3814-3815.
31. Wang H., Wu S., Chu X., Yu R. Chemical Communications 2012, 48:5916-5918.
32. Wang J., Wu L., Ren J., Qu X. Small 2012, 8:259-264.
33. Wege H., Chui M.S., Le H.T., Tran J.M., Zern M.A. Nucleic Acids Research 2002, 31:e3.
34. Wu L., Wang J., Feng L., Ren J., Wei W., Qu X. Advanced Materials 2012, 24:2447-2452.
35. Xiao Y., Dane K.Y., Uzawa T., Csordas A., Qian J., Soh H.T., Daugherty P.S., Lagally E.T., Heeger A.J., Plaxco K.W. Journal of the American Chemical Society 2010, 132:15300-15307.
36. Xiao Y., Pavlov V., Niazov T., Dishon A., Kotler M., Willner I. Journal of the American Chemical Society 2004, 126:7430-7431.
37. Yang W., Zhu X., Liu Q., Lin Z., Qiu B., Chen G. Chemical Communications 2011, 47:7452-7454.
38. Zhang Z., Sharon E., Freeman R., Liu X., Willner I. Analytical Chemistry 2012, 84:4789-4797.
39. Zhang Z., Zhang C. Analytical Chemistry 2012, 84:1623-1629.
40. Zhou H., Liu J., Xu J.J., Chen H.Y. Chemical Communications 2011, 47:8358-8360.
41. Zhou X., Xing D. Chemical Society Reviews 2012, 41:4643-4656.
42. Zhou X., Xing D., Zhu D., Jia L. Analytical Chemistry 2008, 81:255-261.
43. Zuo X., Xia F., Patterson A., Soh H.T., Xiao Y., Plaxco K.W. ChemBioChem 2011, 12:2745-2747.