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Volumn 7, Issue 12, 2012, Pages

iPiG: Integrating Peptide Spectrum Matches into Genome Browser Visualizations

Author keywords

[No Author keywords available]

Indexed keywords

PEPTIDE;

EID: 84870751362     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0050246     Document Type: Article
Times cited : (21)

References (17)
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  • 5
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    • The generic genome browser: A building block for a model organism system database
    • Stein LD, Mungall C, Shu S, Caudy M, Mangone M, et al. (2002) The generic genome browser: A building block for a model organism system database. Genome Research 12: 1599-1610.
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  • 6
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    • The integrated genome browser: free software for distribution and exploration of genome-scale datasets
    • Nicol JW, Helt GA, Blanchard SG, Raja A, Loraine AE, (2009) The integrated genome browser: free software for distribution and exploration of genome-scale datasets. Bioinformatics 25: 2730-2731.
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  • 8
    • 84863507534 scopus 로고    scopus 로고
    • Geneious basic: An in-tegrated and extendable desktop software platform for the organization and analysis of sequence data
    • Kearse M, Moir R, Wilson A, Stones-Havas S, Cheung M, et al. (2012) Geneious basic: An in-tegrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics 28: 1647-1649.
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    • Kearse, M.1    Moir, R.2    Wilson, A.3    Stones-Havas, S.4    Cheung, M.5
  • 9
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    • Kalume D, Peri S, Reddy R, Zhong J, Okulate M, et al. (2005) Genome annotation of anopheles gambiae using mass spectrometry-derived data. BMC Genomics 6: 128.
    • (2005) BMC Genomics , vol.6 , pp. 128
    • Kalume, D.1    Peri, S.2    Reddy, R.3    Zhong, J.4    Okulate, M.5
  • 12
    • 84870721324 scopus 로고    scopus 로고
    • File formats commonly used in mass spectrometry proteomics
    • doi:10.1074/mcp.R112.019695
    • Deutsch EW (2012) File formats commonly used in mass spectrometry proteomics. Molecular & Cellular Proteomics doi:10.1074/mcp.R112.019695.
    • (2012) Molecular & Cellular Proteomics
    • Deutsch, E.W.1
  • 13
    • 54949129419 scopus 로고    scopus 로고
    • ProteoWizard: open source software for rapid proteomics tools development
    • Kessner D, Chambers M, Burke R, Agus D, Mallick P, (2008) ProteoWizard: open source software for rapid proteomics tools development. Bioinformatics 24: 2534-2536.
    • (2008) Bioinformatics , vol.24 , pp. 2534-2536
    • Kessner, D.1    Chambers, M.2    Burke, R.3    Agus, D.4    Mallick, P.5
  • 16
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    • Technical Report TR94-17, Department of Computer Science, The University of Arizona
    • Wu S, Manber U (1994) A fast algorithm for multi-pattern searching. Technical Report TR94-17, Department of Computer Science, The University of Arizona.
    • (1994) A fast algorithm for multi-pattern searching
    • Wu, S.1    Manber, U.2
  • 17
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    • When less can yield more - computational preprocessing of MS/MS spectra for peptide identification
    • Renard BY, Kirchner M, Monigatti F, Ivanov AR, Rappsilber J, et al. (2009) When less can yield more - computational preprocessing of MS/MS spectra for peptide identification. PROTEOMICS 9: 4978-4984.
    • (2009) PROTEOMICS , vol.9 , pp. 4978-4984
    • Renard, B.Y.1    Kirchner, M.2    Monigatti, F.3    Ivanov, A.R.4    Rappsilber, J.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.