Microscopic rates of peptide-phospholipid bilayer interactions from single-molecule residence times

Journal of the American Chemical Society

Volumn 134, Issue 48, 2012, Pages 19652-19660

  Myers, Grant A ^a   Gacek, Daniel A ^a   Peterson, Eric M ^a   Fox, Christopher B ^a,b,c   Harris, Joel M ^a,b  

^a UNIVERSITY OF UTAH   (United States)

^b Department of Electrical and Computer Engineering   (United States)

^c INFECTIOUS DISEASE RESEARCH INSTITUTE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BI-LAYER; FIRST-ORDER; FLUORESCENCE MEASUREMENTS; FOLDED STATE; FREE ENERGY CHANGE; FREE SOLUTIONS; HELIX CONFORMATION; KINETIC ANALYSIS; KINETIC MODELS; MEMBRANE SURFACE; MEMBRANE-ACTIVE PEPTIDES; PEPTIDE-MEMBRANE INTERACTIONS; PHOSPHOLIPID BILAYER; RANDOM COIL; RESIDENCE TIME; SINGLE-MOLECULE; SUPPORTED LIPID BILAYERS; SYSTEM OF DIFFERENTIAL EQUATIONS; THREE-STATE MODELS; TOTAL INTERNAL REFLECTION FLUORESCENCE MICROSCOPY; TWO-STEP MODEL;

ADSORPTION; DIFFERENTIAL EQUATIONS; FREE ENERGY; KINETICS; LIPID BILAYERS; MEMBRANES; MOLECULES; PHOSPHOLIPIDS; REFRACTIVE INDEX;

PEPTIDES;

DIPALMITOYLPHOSPHATIDYLCHOLINE; GLUCAGON LIKE PEPTIDE 1;

ADSORPTION; ARTICLE; FLUORESCENCE; HISTOGRAM; KINETICS; LIPID BILAYER; MICROSCOPY; MOLECULAR INTERACTION; PROTEIN BINDING; PROTEIN CONFORMATION; PROTEIN FOLDING; PROTEIN MOTIF;

GLUCAGON-LIKE PEPTIDE 1; KINETICS; LIPID BILAYERS; MICROSCOPY, FLUORESCENCE; MODELS, MOLECULAR; PEPTIDES; PHOSPHOLIPIDS; PROTEIN BINDING;

EID: 84870686123     PISSN: 00027863     EISSN: 15205126     Source Type: Journal    
DOI: 10.1021/ja306074k     Document Type: Article

References (49)

1. Sargent, D. F.; Schwyzer, R. Proc. Natl. Acad. Sci. U.S.A. 1986, 83, 5774
2. Castanho, M. A. R. B.; Fernandes, M. X. Eur. Biophys. J. 2006, 35, 92
3. Langelaan, D. N.; Rainey, J. K. Biochem. Cell Biol. 2010, 88, 203
4. Grieve, D. J.; Cassidy, R. S.; Green, B. D. Br. J. Pharmacol. 2009, 157, 1340
5. Van Gaal, L. F.; Gutkin, S. W.; Nauck, M. A. Eur. J. Endocrinol. 2008, 158, 773
6. MacDonald, P. E.; El-kholy, W.; Riedel, M. J.; Salapatek, A. M. F.; Light, P. E.; Wheeler, M. B. Diabetes 2002, 51, S434
7. Wieprecht, T.; Apostolov, O.; Beyermann, M.; Seelig, J. J. Mol. Biol. 1999, 294, 785
8. Thornton, K.; Gorenstein, D. G. Biochemistry 1994, 33, 3532
9. Neidigh, J. W.; Fesinmeyer, R. M.; Prickett, K. S.; Andersen, N. H. Biochemistry 2001, 40, 13188
10. Andersen, N. H.; Brodsky, Y.; Neidigh, J. W.; Prickett, K. S. Bioorg. Med. Chem. 2002, 10, 79
11. Xiaoqing, C.; Danielle, K.; Søren, B.; Jens, J. L. Magn. Reson. Chem. 2001, 39, 477
12. Underwood, C. R.; Garibay, P.; Knudsen, L. B.; Hastrup, S.; Peters, G. H.; Rudolph, R.; Reedtz-Runge, S. J. Biol. Chem. 2010, 285, 723
13. Constantinescu, I.; Lafleur, M. Biochim. Biophys. Acta 2004, 1667, 26
14. Papo, N.; Shai, Y. Biochemistry 2003, 42, 458
15. Fox, C. B.; Wayment, J. R.; Myers, G. A.; Endicott, S. K.; Harris, J. M. Anal. Chem. 2009, 81, 5130
16. Tolman, R. C. The Principles of Statistical Mechanics; Oxford University Press: London, 1938.
17. Evans, M. G.; Polanyi, M. Trans. Faraday Soc. 1935, 31, 875
18. Eyring, H. J. Chem. Phys. 1935, 3, 107
19. Day, R.; Daggett, V. J. Mol. Biol. 2007, 366, 677
20. Walder, R.; Kastantin, M.; Schwartz, D. K. Analyst 2012, 137, 2987
21. Lowry, T. M.; John, W. T. J. Chem. Soc. Trans. 1910, 97, 2634
22. Wei, J.; Prater, C. D. In Advances in Catalysis; Eley, D. D.; Selwood, P. W.; Weisz, P. B., Eds.; Academic Press: New York, NY, 1962; Vol. 13, p 203.
23. Capellos, C. Kinetic systems: mathematical description of chemical kinetics in solution; Wiley-Interscience: New York, 1972.
24. Hansen, R. L. Anal. Chem. 1998, 70, 4247
25. Starr, T. E.; Thompson, N. L. Biophys. J. 2001, 80, 1575
26. Bard, A. J.; Faulkner, L. R. Electrochemical Methods: Fundamentals and Applications, 2 nd ed.; Wiley: New York, 2001.
27. Charitat, T.; Bellet-Amalric, E.; Fragneto, G.; Graner, F. Eur. Phys. J. B 1999, 8, 583
28. Starr, T. E.; Thompson, N. L. Langmuir 2000, 16, 10301
29. Tamm, L. K.; McConnell, H. M. Biophys. J. 1985, 47, 105
30. Wayment, J. R.; Harris, J. M. Anal. Chem. 2008, 81, 336
31. Peterson, E. M.; Harris, J. M. Anal. Chem. 2009, 82, 189
32. Ambrose, W. P.; Goodwin, P. M.; Martin, J. C.; Keller, R. A. Phys. Rev. Lett. 1994, 72, 160
33. Lu, H. P.; Xie, X. S. Nature 1997, 385, 143
34. Yip, W.-T.; Hu, D.; Yu, J.; Bout, D. A. V.; Barbara, P. F. J. Phys. Chem. A 1998, 102, 7564
35. Gensch, T.; Böhmer, M.; Aramendía, P. F. J. Phys. Chem. A 2005, 109, 6652
36. Gao, F.; Mei, E.; Lim, M.; Hochstrasser, R. M. J. Am. Chem. Soc. 2006, 128, 4814
37. Hanley, D. C.; Harris, J. M. Anal. Chem. 2001, 73, 5030
38. Sun, S.; Luo, N.; Ornstein, R. L.; Rein, R. Biophys. J. 1992, 62, 104
39. Zagrovic, B.; Jayachandran, G.; Millett, I. S.; Doniach, S.; Pande, V. S. J. Mol. Biol. 2005, 353, 232
40. Rice, S. A. In Comprehensive Chemical Kinetics; Bramford, C. H.; Tipper, C. F. H.; Compton, R. G., Eds.; Elsevier: Amsterdam, 1985; Vol. 25.
41. Koynova, R.; Caffrey, M. Biochim. Biophys. Acta 1998, 1376, 91
42. Pott, T.; Dufourcq, J.; Dufourc, E. J. Eur. Biophys. J. 1996, 25, 55
43. Sekharam, K. M.; Bradrick, T. D.; Georghiou, S. Biochim. Biophys. Acta 1991, 1063, 171
44. Ishihara, A.; Jacobson, K. Biophys. J. 1993, 65, 1754
45. Simson, R.; Sheets, E. D.; Jacobson, K. Biophys. J. 1995, 69, 989
46. Saxton, M. J.; Jacobson, K. Annu. Rev. Biophys. Biomol. Struct. 1997, 26, 373
47. Ahyayauch, H.; Raab, M.; Busto, J. V.; Andraka, N.; Arrondo, J.-L. R.; Masserini, M.; Tvaroska, I.; Goñi, F. M. Biophys. J. 2012, 103, 453
48. Bong, D. T.; Janshoff, A.; Steinem, C.; Ghadiri, M. R. Biophys. J. 2000, 78, 839
49. Kastantin, M.; Schwartz, D. K. ACS Nano 2011, 5, 9861