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Volumn 6, Issue 11, 2012, Pages 10239-10249

Using nanotopography and metabolomics to identify biochemical effectors of multipotency

Author keywords

mesenchymal stem cells; metabolomics; nanotopography; systems biology

Indexed keywords

BIOCHEMICAL PATHWAY; KEY REGULATORS; MESENCHYMAL STEM CELL; METABOLIC ACTIVITY; METABOLIC PROFILING; METABOLOMES; METABOLOMICS; NANOTOPOGRAPHIES; STEM CELL PHENOTYPES; SYSTEMS APPROACH; SYSTEMS BIOLOGY;

EID: 84870458992     PISSN: 19360851     EISSN: 1936086X     Source Type: Journal    
DOI: 10.1021/nn304046m     Document Type: Article
Times cited : (110)

References (47)
  • 1
    • 52549116234 scopus 로고    scopus 로고
    • Small Functional Groups for Controlled Differentiation of Hydrogel-Encapsulated Human Mesenchymal Stem Cells
    • Benoit, D. S. W.; Schwartz, M. P.; Durney, A. R.; Anseth, K. S. Small Functional Groups for Controlled Differentiation of Hydrogel-Encapsulated Human Mesenchymal Stem Cells Nat. Mater. 2008, 7, 816-823
    • (2008) Nat. Mater. , vol.7 , pp. 816-823
    • Benoit, D.S.W.1    Schwartz, M.P.2    Durney, A.R.3    Anseth, K.S.4
  • 2
    • 1842426730 scopus 로고    scopus 로고
    • Cell Shape, Cytoskeletal Tension, and Rhoa Regulate Stem Cell Lineage Commitment
    • McBeath, R.; Pirone, D. M.; Nelson, C. M.; Bhadriraju, K.; Chen, C. S. Cell Shape, Cytoskeletal Tension, and Rhoa Regulate Stem Cell Lineage Commitment Dev. Cell 2004, 6, 483-495
    • (2004) Dev. Cell , vol.6 , pp. 483-495
    • McBeath, R.1    Pirone, D.M.2    Nelson, C.M.3    Bhadriraju, K.4    Chen, C.S.5
  • 3
  • 4
    • 23244450260 scopus 로고    scopus 로고
    • Controlling the Phenotype and Function of Mesenchymal Stem Cells in Vitro by Adhesion to Silane-Modified Clean Glass Surfaces
    • Curran, J. M.; Chen, R.; Hunt, J. A. Controlling the Phenotype and Function of Mesenchymal Stem Cells in Vitro by Adhesion to Silane-Modified Clean Glass Surfaces Biomaterials 2005, 26, 7057-7067
    • (2005) Biomaterials , vol.26 , pp. 7057-7067
    • Curran, J.M.1    Chen, R.2    Hunt, J.A.3
  • 5
    • 33747152561 scopus 로고    scopus 로고
    • Matrix Elasticity Directs Stem Cell Lineage Specification
    • Engler, A. J.; Sen, S.; Sweeney, H. L.; Discher, D. E. Matrix Elasticity Directs Stem Cell Lineage Specification Cell 2006, 126, 677-689
    • (2006) Cell , vol.126 , pp. 677-689
    • Engler, A.J.1    Sen, S.2    Sweeney, H.L.3    Discher, D.E.4
  • 8
    • 0025741349 scopus 로고
    • Identification of Stromal Cell Precursors in Human Bone Marrow by a Novel Monoclonal Antibody, Stro-1
    • Simmons, P. J.; Torok-Storb, B. Identification of Stromal Cell Precursors in Human Bone Marrow by a Novel Monoclonal Antibody, Stro-1 Blood 1991, 78, 55-62
    • (1991) Blood , vol.78 , pp. 55-62
    • Simmons, P.J.1    Torok-Storb, B.2
  • 10
    • 0141887410 scopus 로고    scopus 로고
    • Stro-1, Hop-26 (Cd63), Cd49a and Sb-10 (Cd166) as Markers of Primitive Human Marrow Stromal Cells and Their More Differentiated Progeny: A Comparative Investigation in Vitro
    • Stewart, K.; Monk, P.; Walsh, S.; Jefferiss, C. M.; Letchford, J.; Beresford, J. N. Stro-1, Hop-26 (Cd63), Cd49a and Sb-10 (Cd166) as Markers of Primitive Human Marrow Stromal Cells and Their More Differentiated Progeny: A Comparative Investigation in Vitro Cell Tissue Res. 2003, 313, 281-290
    • (2003) Cell Tissue Res. , vol.313 , pp. 281-290
    • Stewart, K.1    Monk, P.2    Walsh, S.3    Jefferiss, C.M.4    Letchford, J.5    Beresford, J.N.6
  • 11
    • 77953788894 scopus 로고    scopus 로고
    • Introducing Dip Pen Nanolithography as a Tool for Controlling Stem Cell Behaviour: Unlocking the Potential of the Next Generation of Smart Materials in Regenerative Medicine
    • Curran, J. M.; Stokes, R.; Irvine, E.; Graham, D.; Amro, N. A.; Sanedrin, R. G.; Jamil, H.; Hunt, J. A. Introducing Dip Pen Nanolithography as a Tool for Controlling Stem Cell Behaviour: Unlocking the Potential of the Next Generation of Smart Materials in Regenerative Medicine Lab Chip 2010, 10, 1662-1670
    • (2010) Lab Chip , vol.10 , pp. 1662-1670
    • Curran, J.M.1    Stokes, R.2    Irvine, E.3    Graham, D.4    Amro, N.A.5    Sanedrin, R.G.6    Jamil, H.7    Hunt, J.A.8
  • 14
    • 0034712109 scopus 로고    scopus 로고
    • Out of Eden: Stem Cells and Their Niches
    • Watt, F. M.; Hogan, B. L. Out of Eden: Stem Cells and Their Niches Science 2000, 287, 1427-1430
    • (2000) Science , vol.287 , pp. 1427-1430
    • Watt, F.M.1    Hogan, B.L.2
  • 16
    • 33748806476 scopus 로고    scopus 로고
    • Metabolic Changes in Mesenchymal Stem Cells in Osteogenic Medium Measured by Autofluorescence Spectroscopy
    • Reyes, J. M.; Fermanian, S.; Yang, F.; Zhou, S. Y.; Herretes, S.; Murphy, D. B.; Elisseeff, J. H.; Chuck, R. S. Metabolic Changes in Mesenchymal Stem Cells in Osteogenic Medium Measured by Autofluorescence Spectroscopy Stem Cells 2006, 24, 1213-1217
    • (2006) Stem Cells , vol.24 , pp. 1213-1217
    • Reyes, J.M.1    Fermanian, S.2    Yang, F.3    Zhou, S.Y.4    Herretes, S.5    Murphy, D.B.6    Elisseeff, J.H.7    Chuck, R.S.8
  • 17
    • 58149269409 scopus 로고    scopus 로고
    • Bone Marrow-Derived Human Mesenchymal Stem Cells Become Quiescent on Soft Substrates but Remain Responsive to Chemical or Mechanical Stimuli
    • Winer, J. P.; Janmey, P. A.; McCormick, M. E.; Funaki, M. Bone Marrow-Derived Human Mesenchymal Stem Cells Become Quiescent on Soft Substrates but Remain Responsive to Chemical or Mechanical Stimuli Tissue Eng. Part A 2009, 15, 147-154
    • (2009) Tissue Eng. Part A , vol.15 , pp. 147-154
    • Winer, J.P.1    Janmey, P.A.2    McCormick, M.E.3    Funaki, M.4
  • 18
    • 28444486367 scopus 로고    scopus 로고
    • Stem Cell Niche: Structure and Function
    • Li, L.; Xie, T. Stem Cell Niche: Structure and Function Annu. Rev. Cell Dev. Biol. 2005, 21, 605-631
    • (2005) Annu. Rev. Cell Dev. Biol. , vol.21 , pp. 605-631
    • Li, L.1    Xie, T.2
  • 19
    • 33745635043 scopus 로고    scopus 로고
    • The Stem-Cell Niche as an Entity of Action
    • Scadden, D. T. The Stem-Cell Niche as an Entity of Action Nature 2006, 441, 1075-1079
    • (2006) Nature , vol.441 , pp. 1075-1079
    • Scadden, D.T.1
  • 20
    • 67849101009 scopus 로고    scopus 로고
    • The Use of Nanoscale Topography to Modulate the Dynamics of Adhesion Formation in Primary Osteoblasts and Erk/Mapk Signalling in Stro-1+ Enriched Skeletal Stem Cells
    • Biggs, M. J.; Richards, R. G.; Gadegaard, N.; Wilkinson, C. D.; Oreffo, R. O.; Dalby, M. J. The Use of Nanoscale Topography to Modulate the Dynamics of Adhesion Formation in Primary Osteoblasts and Erk/Mapk Signalling in Stro-1+ Enriched Skeletal Stem Cells Biomaterials 2009, 30, 5094-5103
    • (2009) Biomaterials , vol.30 , pp. 5094-5103
    • Biggs, M.J.1    Richards, R.G.2    Gadegaard, N.3    Wilkinson, C.D.4    Oreffo, R.O.5    Dalby, M.J.6
  • 22
    • 84862281756 scopus 로고    scopus 로고
    • Markers for Characterization of Bone Marrow Multipotential Stromal Cells
    • Boxall, S. A.; Jones, E. Markers for Characterization of Bone Marrow Multipotential Stromal Cells Stem Cells Int. 2012, 2012, 975871
    • (2012) Stem Cells Int. , vol.2012 , pp. 975871
    • Boxall, S.A.1    Jones, E.2
  • 23
    • 38849200402 scopus 로고    scopus 로고
    • The Beta Integrins and Cytoskeletal Nanoimprinting
    • Wood, M. A.; Bagnaninchi, P.; Dalby, M. J. The Beta Integrins and Cytoskeletal Nanoimprinting Exp. Cell Res. 2008, 314, 927-935
    • (2008) Exp. Cell Res. , vol.314 , pp. 927-935
    • Wood, M.A.1    Bagnaninchi, P.2    Dalby, M.J.3
  • 24
    • 0037404407 scopus 로고    scopus 로고
    • Molecular Cloning of the Cell Surface Antigen Identified by the Osteoprogenitor-Specific Monoclonal Antibody, Hop-26
    • Zannettino, A. C.; Harrison, K.; Joyner, C. J.; Triffitt, J. T.; Simmons, P. J. Molecular Cloning of the Cell Surface Antigen Identified by the Osteoprogenitor-Specific Monoclonal Antibody, Hop-26 J. Cell Biochem. 2003, 89, 56-66
    • (2003) J. Cell Biochem. , vol.89 , pp. 56-66
    • Zannettino, A.C.1    Harrison, K.2    Joyner, C.J.3    Triffitt, J.T.4    Simmons, P.J.5
  • 25
    • 33745480223 scopus 로고    scopus 로고
    • Characterization and Multipotentiality of Human Fetal Femur-Derived Cells: Implications for Skeletal Tissue Regeneration
    • Mirmalek-Sani, S. H.; Tare, R. S.; Morgan, S. M.; Roach, H. I.; Wilson, D. I.; Hanley, N. A.; Oreffo, R. O. Characterization and Multipotentiality of Human Fetal Femur-Derived Cells: Implications for Skeletal Tissue Regeneration Stem Cells 2006, 24, 1042-1053
    • (2006) Stem Cells , vol.24 , pp. 1042-1053
    • Mirmalek-Sani, S.H.1    Tare, R.S.2    Morgan, S.M.3    Roach, H.I.4    Wilson, D.I.5    Hanley, N.A.6    Oreffo, R.O.7
  • 27
    • 12244289928 scopus 로고    scopus 로고
    • Cell Cycle-Dependent Translocation of Prc1 on the Spindle by Kif4 Is Essential for Midzone Formation and Cytokinesis
    • Zhu, C.; Jiang, W. Cell Cycle-Dependent Translocation of Prc1 on the Spindle by Kif4 Is Essential for Midzone Formation and Cytokinesis Proc. Natl. Acad. Sci. U. S. A. 2005, 102, 343-348
    • (2005) Proc. Natl. Acad. Sci. U. S. A. , vol.102 , pp. 343-348
    • Zhu, C.1    Jiang, W.2
  • 28
    • 0033174155 scopus 로고    scopus 로고
    • Kip1Meets Skp2: New Links in Cell-Cycle Control
    • Amati, B.; Vlach, J. Kip1Meets Skp2: New Links in Cell-Cycle Control Nat. Cell Biol. 1999, 1, E91-93
    • (1999) Nat. Cell Biol. , vol.1 , pp. 91-93
    • Amati, B.1    Vlach, J.2
  • 31
    • 28644436192 scopus 로고    scopus 로고
    • Changes in Regulatory Phosphorylation of Cdc25c Ser287 and Wee1 Ser549 during Normal Cell Cycle Progression and Checkpoint Arrests
    • Stanford, J. S.; Ruderman, J. V. Changes in Regulatory Phosphorylation of Cdc25c Ser287 and Wee1 Ser549 During Normal Cell Cycle Progression and Checkpoint Arrests Mol. Biol. Cell 2005, 16, 5749-5760
    • (2005) Mol. Biol. Cell , vol.16 , pp. 5749-5760
    • Stanford, J.S.1    Ruderman, J.V.2
  • 32
    • 0018102359 scopus 로고
    • The Relationship between the Spleen Colony-Forming Cell and the Haemopoietic Stem Cell
    • Schofield, R. The Relationship between the Spleen Colony-Forming Cell and the Haemopoietic Stem Cell Blood Cells 1978, 4, 7-25
    • (1978) Blood Cells , vol.4 , pp. 7-25
    • Schofield, R.1
  • 34
    • 80155205233 scopus 로고    scopus 로고
    • Artificial Niche Microarrays for Probing Single Stem Cell Fate in High Throughput
    • Gobaa, S.; Hoehnel, S.; Roccio, M.; Negro, A.; Kobel, S.; Lutolf, M. P. Artificial Niche Microarrays for Probing Single Stem Cell Fate in High Throughput Nat. Methods 2011, 8, 949-955
    • (2011) Nat. Methods , vol.8 , pp. 949-955
    • Gobaa, S.1    Hoehnel, S.2    Roccio, M.3    Negro, A.4    Kobel, S.5    Lutolf, M.P.6
  • 35
    • 3042825341 scopus 로고    scopus 로고
    • Nanoliter-Scale Synthesis of Arrayed Biomaterials and Application to Human Embryonic Stem Cells
    • Anderson, D. G.; Levenberg, S.; Langer, R. Nanoliter-Scale Synthesis of Arrayed Biomaterials and Application to Human Embryonic Stem Cells Nat. Biotechnol. 2004, 22, 863-866
    • (2004) Nat. Biotechnol. , vol.22 , pp. 863-866
    • Anderson, D.G.1    Levenberg, S.2    Langer, R.3
  • 37
    • 79960842007 scopus 로고    scopus 로고
    • Engineered Polymer-Media Interfaces for the Long-Term Self-Renewal of Human Embryonic Stem Cells
    • Irwin, E. F.; Gupta, R.; Dashti, D. C.; Healy, K. E. Engineered Polymer-Media Interfaces for the Long-Term Self-Renewal of Human Embryonic Stem Cells Biomaterials 2011, 32, 6912-6919
    • (2011) Biomaterials , vol.32 , pp. 6912-6919
    • Irwin, E.F.1    Gupta, R.2    Dashti, D.C.3    Healy, K.E.4
  • 39
    • 84860575660 scopus 로고    scopus 로고
    • Changes in Embryonic Stem Cell Colony Morphology and Early Differentiation Markers Driven by Colloidal Crystal Topographical Cues
    • Ji, L.; LaPointe, V. L.; Evans, N. D.; Stevens, M. M. Changes in Embryonic Stem Cell Colony Morphology and Early Differentiation Markers Driven by Colloidal Crystal Topographical Cues Eur. Cell Mater. 2012, 23, 135-146
    • (2012) Eur. Cell Mater. , vol.23 , pp. 135-146
    • Ji, L.1    Lapointe, V.L.2    Evans, N.D.3    Stevens, M.M.4
  • 41
    • 79751471991 scopus 로고    scopus 로고
    • Development of an Assay Based on Cell Counting with Quantum Dot Labels for Comparing Cell Adhesion within Cocultures
    • Rivera-Gil, P.; Yang, F.; Thomas, H.; Li, L.; Terfort, A.; Parak, W. J. Development of an Assay Based on Cell Counting with Quantum Dot Labels for Comparing Cell Adhesion within Cocultures Nano Today 2011, 6, 20-27
    • (2011) Nano Today , vol.6 , pp. 20-27
    • Rivera-Gil, P.1    Yang, F.2    Thomas, H.3    Li, L.4    Terfort, A.5    Parak, W.J.6
  • 42
    • 0035710746 scopus 로고    scopus 로고
    • Analysis of Relative Gene Expression Data Using Real-Time Quantitative Pcr and the 2(-Delta Delta C(T)) Method
    • Livak, K. J.; Schmittgen, T. D. Analysis of Relative Gene Expression Data Using Real-Time Quantitative Pcr and the 2(-Delta Delta C(T)) Method Methods 2001, 25, 402-408
    • (2001) Methods , vol.25 , pp. 402-408
    • Livak, K.J.1    Schmittgen, T.D.2
  • 43
    • 4344571581 scopus 로고    scopus 로고
    • Rank Products: A Simple, yet Powerful, New Method to Detect Differentially Regulated Genes in Replicated Microarray Experiments
    • Breitling, R.; Armengaud, P.; Amtmann, A.; Herzyk, P. Rank Products: A Simple, yet Powerful, New Method to Detect Differentially Regulated Genes in Replicated Microarray Experiments FEBS Lett. 2004, 573, 83-92
    • (2004) FEBS Lett. , vol.573 , pp. 83-92
    • Breitling, R.1    Armengaud, P.2    Amtmann, A.3    Herzyk, P.4
  • 44
    • 32444446805 scopus 로고    scopus 로고
    • Xcms: Processing Mass Spectrometry Data for Metabolite Profiling Using Nonlinear Peak Alignment, Matching, and Identification
    • Smith, C. A.; Want, E. J.; O'Maille, G.; Abagyan, R.; Siuzdak, G. Xcms: Processing Mass Spectrometry Data for Metabolite Profiling Using Nonlinear Peak Alignment, Matching, and Identification Anal. Chem. 2006, 78, 779-787
    • (2006) Anal. Chem. , vol.78 , pp. 779-787
    • Smith, C.A.1    Want, E.J.2    O'Maille, G.3    Abagyan, R.4    Siuzdak, G.5
  • 45
    • 79953267955 scopus 로고    scopus 로고
    • Peakml/Mzmatch: A File Format, Java Library, R Library, and Tool-Chain for Mass Spectrometry Data Analysis
    • Scheltema, R. A.; Jankevics, A.; Jansen, R. C.; Swertz, M. A.; Breitling, R. Peakml/Mzmatch: A File Format, Java Library, R Library, and Tool-Chain for Mass Spectrometry Data Analysis Anal. Chem. 2011, 83, 2786-2793
    • (2011) Anal. Chem. , vol.83 , pp. 2786-2793
    • Scheltema, R.A.1    Jankevics, A.2    Jansen, R.C.3    Swertz, M.A.4    Breitling, R.5
  • 47
    • 81255144050 scopus 로고    scopus 로고
    • Toward Global Metabolomics Analysis with Hydrophilic Interaction Liquid Chromatography-Mass Spectrometry: Improved Metabolite Identification by Retention Time Prediction
    • Creek, D. J.; Jankevics, A.; Breitling, R.; Watson, D. G.; Barrett, M. P.; Burgess, K. E. Toward Global Metabolomics Analysis with Hydrophilic Interaction Liquid Chromatography-Mass Spectrometry: Improved Metabolite Identification by Retention Time Prediction Anal. Chem. 2011, 83, 8703-8710
    • (2011) Anal. Chem. , vol.83 , pp. 8703-8710
    • Creek, D.J.1    Jankevics, A.2    Breitling, R.3    Watson, D.G.4    Barrett, M.P.5    Burgess, K.E.6


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