-
1
-
-
33749490370
-
Packaging of Brome mosaic virus subgenomic RNA is functionally coupled to replication-dependent transcription and translation of coat protein
-
Annamalai P., Rao A.L.N. Packaging of Brome mosaic virus subgenomic RNA is functionally coupled to replication-dependent transcription and translation of coat protein. Journal of Virology 2006, 80:10096-10108.
-
(2006)
Journal of Virology
, vol.80
, pp. 10096-10108
-
-
Annamalai, P.1
Rao, A.L.N.2
-
2
-
-
38349115693
-
Replication-coupled packaging mechanism in positive-strand RNA viruses: synchronized coexpression of functional multigenome RNA components of an animal and a plant virus in Nicotiana benthamiana cells by agroinfiltration
-
Annamalai P., Rofail F., Demason D.A., Rao A.L. Replication-coupled packaging mechanism in positive-strand RNA viruses: synchronized coexpression of functional multigenome RNA components of an animal and a plant virus in Nicotiana benthamiana cells by agroinfiltration. Journal of Virology 2008, 82:1484-1495.
-
(2008)
Journal of Virology
, vol.82
, pp. 1484-1495
-
-
Annamalai, P.1
Rofail, F.2
Demason, D.A.3
Rao, A.L.4
-
3
-
-
79952365639
-
Subcellular localization and rearrangement of endoplasmic reticulum by Brome mosaic virus capsid protein
-
Bamunusinghe D., Seo J.-K., Rao A.L.N. Subcellular localization and rearrangement of endoplasmic reticulum by Brome mosaic virus capsid protein. Journal of Virology 2011, 85:2953-2963.
-
(2011)
Journal of Virology
, vol.85
, pp. 2953-2963
-
-
Bamunusinghe, D.1
Seo, J.-K.2
Rao, A.L.N.3
-
4
-
-
0035166449
-
The brome mosaic virus RNA3 intergenic replication enhancer folds to mimic a tRNA TCC-stem loop and is modified in vivo
-
Baumstrak T., Ahlquist P. The brome mosaic virus RNA3 intergenic replication enhancer folds to mimic a tRNA TCC-stem loop and is modified in vivo. RNA 2001, 7:1652-1670.
-
(2001)
RNA
, vol.7
, pp. 1652-1670
-
-
Baumstrak, T.1
Ahlquist, P.2
-
5
-
-
0025879354
-
Generation and analysis of nonhomologous RNA-RNA recombinants in brome mosaic virus: sequence complementarities at crossover sites
-
Bujarski J.J., Dzianott A.M. Generation and analysis of nonhomologous RNA-RNA recombinants in brome mosaic virus: sequence complementarities at crossover sites. Journal of Virology 1991, 65:4153-4159.
-
(1991)
Journal of Virology
, vol.65
, pp. 4153-4159
-
-
Bujarski, J.J.1
Dzianott, A.M.2
-
6
-
-
0020083772
-
Use of dodecyl-d-maltoside in the purification and stabilization of RNA polymerase from Brome mosaic virus-infected barley
-
Bujarski J.J., Hardy S.F., Miller W.A., Hall T.C. Use of dodecyl-d-maltoside in the purification and stabilization of RNA polymerase from Brome mosaic virus-infected barley. Virology 1982, 119:465-473.
-
(1982)
Virology
, vol.119
, pp. 465-473
-
-
Bujarski, J.J.1
Hardy, S.F.2
Miller, W.A.3
Hall, T.C.4
-
7
-
-
0033605077
-
A minimal RNA promoter for minus-strand RNA synthesis by the brome mosaic virus polymerase complex
-
Chapman M.R., Kao C.C. A minimal RNA promoter for minus-strand RNA synthesis by the brome mosaic virus polymerase complex. Journal of Molecular Biology 1999, 286:709-720.
-
(1999)
Journal of Molecular Biology
, vol.286
, pp. 709-720
-
-
Chapman, M.R.1
Kao, C.C.2
-
8
-
-
0141570689
-
Packaging of brome mosaic virus RNA3 is mediated through a bipartite signal
-
Choi Y.G., Rao A.L.N. Packaging of brome mosaic virus RNA3 is mediated through a bipartite signal. Journal of Virology 2003, 77:9750-9757.
-
(2003)
Journal of Virology
, vol.77
, pp. 9750-9757
-
-
Choi, Y.G.1
Rao, A.L.N.2
-
9
-
-
33746683274
-
Reverse transcriptase template switching and false alternative transcripts
-
Cocquet J., Chong A., Zhang G., Veitia R.A. Reverse transcriptase template switching and false alternative transcripts. Genomics 2006, 88:127-131.
-
(2006)
Genomics
, vol.88
, pp. 127-131
-
-
Cocquet, J.1
Chong, A.2
Zhang, G.3
Veitia, R.A.4
-
10
-
-
77957316181
-
Correlation between recombination junctions and RNA secondary structure elements in poliovirus Sabin strains
-
Dedepsidis E., Kyriakopoulou Z., Pliaka V., Markoulatos P. Correlation between recombination junctions and RNA secondary structure elements in poliovirus Sabin strains. Virus Genes 2010, 41:181-191.
-
(2010)
Virus Genes
, vol.41
, pp. 181-191
-
-
Dedepsidis, E.1
Kyriakopoulou, Z.2
Pliaka, V.3
Markoulatos, P.4
-
11
-
-
84856894606
-
Bromovirus RNA replication compartment formation requires concerted action of 1a's self-interacting RNA capping and helicase domain
-
Diaz A., Gallei A., Ahlquist P. Bromovirus RNA replication compartment formation requires concerted action of 1a's self-interacting RNA capping and helicase domain. Journal of Virology 2012, 86:821-834.
-
(2012)
Journal of Virology
, vol.86
, pp. 821-834
-
-
Diaz, A.1
Gallei, A.2
Ahlquist, P.3
-
12
-
-
76249098104
-
Evidence for similarity-assisted recombination and predicted stem-loop structure determinant in potato virus×RNA recombination
-
Draghici H.-K., Varrelmann M. Evidence for similarity-assisted recombination and predicted stem-loop structure determinant in potato virus×RNA recombination. Journal of General Virology 2010, 91:552-562.
-
(2010)
Journal of General Virology
, vol.91
, pp. 552-562
-
-
Draghici, H.-K.1
Varrelmann, M.2
-
13
-
-
0034656003
-
Role of RNA structure in heteroduplex-mediated and site-specific nonhomologous recombination in brome mosaic virus
-
Figlerowicz M. Role of RNA structure in heteroduplex-mediated and site-specific nonhomologous recombination in brome mosaic virus. Nucleic Acids Research 2000, 28:1714-1723.
-
(2000)
Nucleic Acids Research
, vol.28
, pp. 1714-1723
-
-
Figlerowicz, M.1
-
14
-
-
0031048602
-
A mutation in the putative RNA polymerase gene inhibits nonhomologous, but not homologous, genetic recombination in an RNA virus
-
Figlerowicz M., Nagy P.D., Bujarski J.J. A mutation in the putative RNA polymerase gene inhibits nonhomologous, but not homologous, genetic recombination in an RNA virus. Proceedings of the National Academy of Sciences of the United States of America 1997, 94:2073-2078.
-
(1997)
Proceedings of the National Academy of Sciences of the United States of America
, vol.94
, pp. 2073-2078
-
-
Figlerowicz, M.1
Nagy, P.D.2
Bujarski, J.J.3
-
15
-
-
0031658935
-
Mutations in the N terminus of the brome mosaic virus polymerase affect genetic RNA-RNA recombination
-
Figlerowicz M., Nagy P.D., Tang N., Kao C.C., Bujarski J.J. Mutations in the N terminus of the brome mosaic virus polymerase affect genetic RNA-RNA recombination. Journal of Virology 1998, 72:9192-9200.
-
(1998)
Journal of Virology
, vol.72
, pp. 9192-9200
-
-
Figlerowicz, M.1
Nagy, P.D.2
Tang, N.3
Kao, C.C.4
Bujarski, J.J.5
-
16
-
-
13744250186
-
Mutual interference between genomic RNA replication and subgenomic mRNA transcription in brome mosaic virus
-
Grdzelishvili VZ, Garcia-Ruiz H., Watanabe T., Ahlquist P. Mutual interference between genomic RNA replication and subgenomic mRNA transcription in brome mosaic virus. Journal of Virology 2005, 79:1438-1451.
-
(2005)
Journal of Virology
, vol.79
, pp. 1438-1451
-
-
Grdzelishvili, V.Z.1
Garcia-Ruiz, H.2
Watanabe, T.3
Ahlquist, P.4
-
17
-
-
0345742595
-
Template sequence near the initiation nucleotide can modulate Brome mosaic virus RNA accumulation in plant protoplasts
-
Hema M., Kao C.C. Template sequence near the initiation nucleotide can modulate Brome mosaic virus RNA accumulation in plant protoplasts. Journal of Virology 2004, 78:1169-1180.
-
(2004)
Journal of Virology
, vol.78
, pp. 1169-1180
-
-
Hema, M.1
Kao, C.C.2
-
19
-
-
77956837956
-
An interaction between the nucleocapsid protein and a component of the replicase-transcriptase complex is crucial for the infectivity of coronavirus genomic RNA
-
Hurst K.R., Ye R., Goebel S.J., Jayaraman P., Masters P.S. An interaction between the nucleocapsid protein and a component of the replicase-transcriptase complex is crucial for the infectivity of coronavirus genomic RNA. Journal of Virology 2010, 84:10276-10288.
-
(2010)
Journal of Virology
, vol.84
, pp. 10276-10288
-
-
Hurst, K.R.1
Ye, R.2
Goebel, S.J.3
Jayaraman, P.4
Masters, P.S.5
-
20
-
-
0023273613
-
High efficiency T7 polymerase synthesis of infectious RNA from cloned Brome mosaic virus cDNA and effects of 5' extensions of transcript infectivity
-
Janda M., French R., Ahlquist P. High efficiency T7 polymerase synthesis of infectious RNA from cloned Brome mosaic virus cDNA and effects of 5' extensions of transcript infectivity. Virology 1987, 158:259-262.
-
(1987)
Virology
, vol.158
, pp. 259-262
-
-
Janda, M.1
French, R.2
Ahlquist, P.3
-
21
-
-
0024840821
-
Defined mutations in a small region of the Brome mosaic virus 2 gene cause diverse temperature-sensitive RNA replication phenotypes
-
Kroner P., Richards D., Traynor P., Ahlquist P. Defined mutations in a small region of the Brome mosaic virus 2 gene cause diverse temperature-sensitive RNA replication phenotypes. Journal of Virology 1989, 63:5302-5309.
-
(1989)
Journal of Virology
, vol.63
, pp. 5302-5309
-
-
Kroner, P.1
Richards, D.2
Traynor, P.3
Ahlquist, P.4
-
23
-
-
0028936186
-
Efficient system of homologous RNA recombination in Brome mosaic virus: sequence and structure requirements and accuracy of crossovers
-
Nagy P.D., Bujarski J.J. Efficient system of homologous RNA recombination in Brome mosaic virus: sequence and structure requirements and accuracy of crossovers. Journal of Virology 1994, 69:131-140.
-
(1994)
Journal of Virology
, vol.69
, pp. 131-140
-
-
Nagy, P.D.1
Bujarski, J.J.2
-
24
-
-
0029656131
-
Homologous RNA recombination in Brome mosaic virus: AU-rich sequences decrease the accuracy of crossovers
-
Nagy P.D., Bujarski J.J. Homologous RNA recombination in Brome mosaic virus: AU-rich sequences decrease the accuracy of crossovers. Journal of Virology 1996, 70:217-225.
-
(1996)
Journal of Virology
, vol.70
, pp. 217-225
-
-
Nagy, P.D.1
Bujarski, J.J.2
-
25
-
-
0030900659
-
Engineering of homologous recombination hot-spots with AU-rich sequences in Brome mosaic virus
-
Nagy P.D., Bujarski J.J. Engineering of homologous recombination hot-spots with AU-rich sequences in Brome mosaic virus. Journal of Virology 1997, 71:3799-3810.
-
(1997)
Journal of Virology
, vol.71
, pp. 3799-3810
-
-
Nagy, P.D.1
Bujarski, J.J.2
-
26
-
-
0031883260
-
Silencing homologous RNA recombination hot spots with GC-rich sequences in Brome mosaic virus
-
Nagy P.D., Bujarski J.J. Silencing homologous RNA recombination hot spots with GC-rich sequences in Brome mosaic virus. Journal of Virology 1998, 72:1122-1130.
-
(1998)
Journal of Virology
, vol.72
, pp. 1122-1130
-
-
Nagy, P.D.1
Bujarski, J.J.2
-
28
-
-
0036893345
-
RNA recombination in brome mosaic virus: effects of strand-specific stem-loop inserts
-
Olsthoorn R.C.L., Bruyére A., Dzianott A., Bujarski J.J. RNA recombination in brome mosaic virus: effects of strand-specific stem-loop inserts. Journal of Virology 2002, 76:12654-12662.
-
(2002)
Journal of Virology
, vol.76
, pp. 12654-12662
-
-
Olsthoorn, R.C.L.1
Bruyére, A.2
Dzianott, A.3
Bujarski, J.J.4
-
29
-
-
0347416788
-
Mutations in the RNA-binding domains of tombusvirus replicase proteins affect RNA recombination in vivo
-
Panaviene Z., Nagy P.D. Mutations in the RNA-binding domains of tombusvirus replicase proteins affect RNA recombination in vivo. Virology 2003, 317:359-372.
-
(2003)
Virology
, vol.317
, pp. 359-372
-
-
Panaviene, Z.1
Nagy, P.D.2
-
30
-
-
0026643534
-
Requirements for ICR-like sequences in the replication of brome mosaic virus genomic RNA
-
Pogue G.P., Marsh L.E., Connell J.P., Hall T.C. Requirements for ICR-like sequences in the replication of brome mosaic virus genomic RNA. Virology 1992, 188:742-753.
-
(1992)
Virology
, vol.188
, pp. 742-753
-
-
Pogue, G.P.1
Marsh, L.E.2
Connell, J.P.3
Hall, T.C.4
-
31
-
-
0036892593
-
Requirements for de novo initiation of RNA synthesis by recombinant flaviviral RNA-dependent RNA polymerases
-
Ranjith-Kumar C.T., Gutshall L., Kim M.J., Sarisky R.T., Kao C.C. Requirements for de novo initiation of RNA synthesis by recombinant flaviviral RNA-dependent RNA polymerases. Journal of Virology 2002, 76:12526-12536.
-
(2002)
Journal of Virology
, vol.76
, pp. 12526-12536
-
-
Ranjith-Kumar, C.T.1
Gutshall, L.2
Kim, M.J.3
Sarisky, R.T.4
Kao, C.C.5
-
32
-
-
33748940970
-
Genome packaging by spherical plant RNA viruses
-
Rao A.L.N. Genome packaging by spherical plant RNA viruses. Annual Review of Phytopathology 2006, 44:61-87.
-
(2006)
Annual Review of Phytopathology
, vol.44
, pp. 61-87
-
-
Rao, A.L.N.1
-
33
-
-
54649083901
-
Preparation and inoculation of mesophyll protoplasts from monocotyledonous and dicotyledenous hosts
-
16D.2.1-16D.2.8
-
Rao A.L.N. Preparation and inoculation of mesophyll protoplasts from monocotyledonous and dicotyledenous hosts. Current Protocols in Microbiology 2007, 16D.2.1-16D.2.8.
-
(2007)
Current Protocols in Microbiology
-
-
Rao, A.L.N.1
-
34
-
-
0042858256
-
Role of the reverse transcriptase, nucleocapsid protein, and template structure in the two-step transfer mechanism in retroviral recombination
-
Roda R.H., Balakrishnan M., Hanson M.N., Wohrl B.M., Le Grice S.F., Roques B.P., Gorelick R.J., Bambara R.A. Role of the reverse transcriptase, nucleocapsid protein, and template structure in the two-step transfer mechanism in retroviral recombination. Journal of Biological Chemistry 2003, 278:31536-31546.
-
(2003)
Journal of Biological Chemistry
, vol.278
, pp. 31536-31546
-
-
Roda, R.H.1
Balakrishnan, M.2
Hanson, M.N.3
Wohrl, B.M.4
Le Grice, S.F.5
Roques, B.P.6
Gorelick, R.J.7
Bambara, R.A.8
-
36
-
-
84863600678
-
A physical interaction between viral replicase and capsid protein is required for genome packaging specificity in an RNA virus
-
Seo J.-K., Kwon S.-J., Rao A.L.N. A physical interaction between viral replicase and capsid protein is required for genome packaging specificity in an RNA virus. Journal of Virology 2012, 86:6210-6221.
-
(2012)
Journal of Virology
, vol.86
, pp. 6210-6221
-
-
Seo, J.-K.1
Kwon, S.-J.2
Rao, A.L.N.3
-
37
-
-
3843102498
-
Alternate, virus-induced membrane rearrangements support positive-strand RNA virus genome replication
-
Schwartz M., Chen J., Lee W.M., Janda M., Ahlquist P. Alternate, virus-induced membrane rearrangements support positive-strand RNA virus genome replication. Proceedings of the National Academy of Sciences of the United States of America 2004, 101:11263-11268.
-
(2004)
Proceedings of the National Academy of Sciences of the United States of America
, vol.101
, pp. 11263-11268
-
-
Schwartz, M.1
Chen, J.2
Lee, W.M.3
Janda, M.4
Ahlquist, P.5
-
38
-
-
1242274560
-
The AU-rich RNA recombination hot spot sequence of Brome mosaic virus is functional in tombusviruses: implications for the mechanism of RNA recombination
-
Shapka N., Nagy P. The AU-rich RNA recombination hot spot sequence of Brome mosaic virus is functional in tombusviruses: implications for the mechanism of RNA recombination. Journal of Virology 2004, 78:2288-2300.
-
(2004)
Journal of Virology
, vol.78
, pp. 2288-2300
-
-
Shapka, N.1
Nagy, P.2
-
39
-
-
2642519500
-
Requirements for Brome mosaic virus subgenomic RNA synthesis in vivo and replicase-core promoter interactions in vitro
-
Sivakumaran K., Choi S.-K., Hema M., Kao C.C. Requirements for Brome mosaic virus subgenomic RNA synthesis in vivo and replicase-core promoter interactions in vitro. Journal of Virology 2004, 78:6091-6101.
-
(2004)
Journal of Virology
, vol.78
, pp. 6091-6101
-
-
Sivakumaran, K.1
Choi, S.-K.2
Hema, M.3
Kao, C.C.4
-
40
-
-
0037294730
-
RNA recombination between cucumoviruses: possible role of predicted stem-loop structures and an internal subgenomic promoter-like motif
-
Suzuki M., Hibi T., Masuta C. RNA recombination between cucumoviruses: possible role of predicted stem-loop structures and an internal subgenomic promoter-like motif. Virology 2003, 306:77-86.
-
(2003)
Virology
, vol.306
, pp. 77-86
-
-
Suzuki, M.1
Hibi, T.2
Masuta, C.3
-
41
-
-
78650756180
-
Recombination of 5' subgenomic RNA3a with genomic RNA3 of Brome mosaic bromovirus in vitro and in vivo
-
Sztuba-Solińska J., Dzianott A., Bujarski J.J. Recombination of 5' subgenomic RNA3a with genomic RNA3 of Brome mosaic bromovirus in vitro and in vivo. Virology 2011, 410:129-141.
-
(2011)
Virology
, vol.410
, pp. 129-141
-
-
Sztuba-Solińska, J.1
Dzianott, A.2
Bujarski, J.J.3
-
43
-
-
3543061610
-
Dissecting the requirement for subgenomic promoter sequences by RNA recombination of brome mosaic virus in vivo: evidence for functional separation of transcription and recombination
-
Wierzchoslawski R., Dzianott A., Bujarski J.J. Dissecting the requirement for subgenomic promoter sequences by RNA recombination of brome mosaic virus in vivo: evidence for functional separation of transcription and recombination. Journal of Virology 2004, 78:8552-8564.
-
(2004)
Journal of Virology
, vol.78
, pp. 8552-8564
-
-
Wierzchoslawski, R.1
Dzianott, A.2
Bujarski, J.J.3
-
44
-
-
33845463807
-
Characterization of a novel 5' subgenomic RNA3a derived from RNA3 of Brome mosaic bromovirus
-
Wierzchoslawski R., Urbanowicz A., Dzianott A., Figlerowicz M., Bujarski J.J. Characterization of a novel 5' subgenomic RNA3a derived from RNA3 of Brome mosaic bromovirus. Journal of Virology 2006, 80:12357-12366.
-
(2006)
Journal of Virology
, vol.80
, pp. 12357-12366
-
-
Wierzchoslawski, R.1
Urbanowicz, A.2
Dzianott, A.3
Figlerowicz, M.4
Bujarski, J.J.5
-
45
-
-
62549135687
-
Brome mosaic virus capsid protein regulates accumulation of viral replication proteins by binding to the replicase assembly RNA element
-
Yi G., Letteney E., Kim Ch-H., Kao C.C. Brome mosaic virus capsid protein regulates accumulation of viral replication proteins by binding to the replicase assembly RNA element. RNA 2009, 15:615-626.
-
(2009)
RNA
, vol.15
, pp. 615-626
-
-
Yi, G.1
Letteney, E.2
Kim, C.-H.3
Kao, C.C.4
-
46
-
-
67650700208
-
RNA binding by the Brome mosaic virus capsid protein and the regulation of viral RNA accumulation
-
Yi G., Vaughan R.C., Yarbrough I., Dharmaiah S., Kao C.C. RNA binding by the Brome mosaic virus capsid protein and the regulation of viral RNA accumulation. Journal of Molecular Biology 2009, 14:314-326.
-
(2009)
Journal of Molecular Biology
, vol.14
, pp. 314-326
-
-
Yi, G.1
Vaughan, R.C.2
Yarbrough, I.3
Dharmaiah, S.4
Kao, C.C.5
-
47
-
-
33847655582
-
RNA-binding proteins that inhibit RNA virus infection
-
Zhu J., Gopinath K., Murali A., Yi G., Hayward S.D., Zhu H., Kao C.C. RNA-binding proteins that inhibit RNA virus infection. Proceedings of the National Academy of Sciences of the United States of America 2007, 104:3129-3134.
-
(2007)
Proceedings of the National Academy of Sciences of the United States of America
, vol.104
, pp. 3129-3134
-
-
Zhu, J.1
Gopinath, K.2
Murali, A.3
Yi, G.4
Hayward, S.D.5
Zhu, H.6
Kao, C.C.7
-
48
-
-
75449101470
-
Coronavirus nucleocapsid protein facilitates template switching and is required for efficient transcription
-
Zúñiga S., Cruz J.L., Sola I., Mateos-Gómez P.A., Palacio L., Enjuanes L. Coronavirus nucleocapsid protein facilitates template switching and is required for efficient transcription. Journal of Virology 2010, 84:2169-2175.
-
(2010)
Journal of Virology
, vol.84
, pp. 2169-2175
-
-
Zúñiga, S.1
Cruz, J.L.2
Sola, I.3
Mateos-Gómez, P.A.4
Palacio, L.5
Enjuanes, L.6
|