메뉴 건너뛰기




Volumn , Issue , 2009, Pages 247-260

Phylogenetic Methods

Author keywords

bacteria; coevolution; evolution; functional prediction; genome analysis; horizontal gene transfer; orthology; paralogy; phylogenomics; sequence alignment

Indexed keywords


EID: 84870367250     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1016/B978-012373944-5.00272-8     Document Type: Chapter
Times cited : (1)

References (14)
  • 1
    • 19544374490 scopus 로고    scopus 로고
    • Genome rearrangement distances and gene order phylogeny in gamma-proteobacteria
    • E. Belda, A. Moya and F.J. Silva (2005) Genome rearrangement distances and gene order phylogeny in gamma-proteobacteria. Molecular Biology and Evolution 22 1456-1467
    • (2005) Molecular Biology and Evolution , vol.22 , pp. 1456-1467
    • Belda, E.1    Moya, A.2    Silva, F.J.3
  • 3
    • 33847247364 scopus 로고    scopus 로고
    • From phylogenetics to phylogenomics: The evolutionary relationships of insect endosymbiotic gamma-proteobacteria as a test case
    • I. Comas, A. Moya and F. Gonzalez-Candelas (2007) From phylogenetics to phylogenomics: The evolutionary relationships of insect endosymbiotic gamma-proteobacteria as a test case. Systematic Biology 56 1-16
    • (2007) Systematic Biology , vol.56 , pp. 1-16
    • Comas, I.1    Moya, A.2    Gonzalez-Candelas, F.3
  • 4
    • 17744394753 scopus 로고    scopus 로고
    • Phylogenomics and the reconstruction of the tree of life
    • F. Delsuc, H. Brinkmann and H. Philippe (2005) Phylogenomics and the reconstruction of the tree of life. Nature Reviews Genetics 6 361-375
    • (2005) Nature Reviews Genetics , vol.6 , pp. 361-375
    • Delsuc, F.1    Brinkmann, H.2    Philippe, H.3
  • 5
    • 0035824060 scopus 로고    scopus 로고
    • Gene arrangements and phylogeny in the class proteobacteria
    • T. Kunisawa (2001) Gene arrangements and phylogeny in the class proteobacteria. Journal of Theoretical Biology 213 9-19
    • (2001) Journal of Theoretical Biology , vol.213 , pp. 9-19
    • Kunisawa, T.1
  • 7
    • 1342271382 scopus 로고    scopus 로고
    • From gene trees to organismal phylogeny in prokaryotes: The case of the gamma-proteobacteria
    • E. Lerat, V. Daubin and N.A. Moran (2003) From gene trees to organismal phylogeny in prokaryotes: The case of the gamma-proteobacteria. PLoS Biology 1 101-109
    • (2003) PLoS Biology , vol.1 , pp. 101-109
    • Lerat, E.1    Daubin, V.2    Moran, N.A.3
  • 8
    • 33750156563 scopus 로고    scopus 로고
    • Overlapping genes as rare genomic markers: The phylogeny of gamma-proteobacteria as a case study
    • Y.Q. Luo, C. Fu, D.Y. Zhang and K. Lin (2006) Overlapping genes as rare genomic markers: The phylogeny of gamma-proteobacteria as a case study. Trends in Genetics 22 593-596
    • (2006) Trends in Genetics , vol.22 , pp. 593-596
    • Luo, Y.Q.1    Fu, C.2    Zhang, D.Y.3    Lin, K.4
  • 10
    • 85047687623 scopus 로고    scopus 로고
    • Host-symbiont recognition in the environmentally transmitted sepiolid squid-Vibrio mutualism
    • M.K. Nishiguchi (2002) Host-symbiont recognition in the environmentally transmitted sepiolid squid-Vibrio mutualism. Microbial Ecology 44 10-18
    • (2002) Microbial Ecology , vol.44 , pp. 10-18
    • Nishiguchi, M.K.1
  • 12
    • 0035927649 scopus 로고    scopus 로고
    • Phylogenetic analyses do not support horizontal gene transfers from bacteria to vertebrates
    • M.J. Stanhope, A. Lupas, M.J. Italia, K.K. Koretke, C. Volker and J.R. Brown (2001) Phylogenetic analyses do not support horizontal gene transfers from bacteria to vertebrates. Nature 411 940-944
    • (2001) Nature , vol.411 , pp. 940-944
    • Stanhope, M.J.1    Lupas, A.2    Italia, M.J.3    Koretke, K.K.4    Volker, C.5    Brown, J.R.6
  • 13
    • 33646584164 scopus 로고    scopus 로고
    • Visualizing and assessing phylogenetic congruence of core gene sets: A case study of the gamma-proteobacteria
    • E. Susko, J. Leigh, W.F. Doolittle and E. Bapteste (2006) Visualizing and assessing phylogenetic congruence of core gene sets: A case study of the gamma-proteobacteria. Molecular Biology and Evolution 23 1019-1030
    • (2006) Molecular Biology and Evolution , vol.23 , pp. 1019-1030
    • Susko, E.1    Leigh, J.2    Doolittle, W.F.3    Bapteste, E.4
  • 14
    • 0035339920 scopus 로고    scopus 로고
    • Molecular phylogenetics: State-of-the-art methods for looking into the past
    • S. Whelan, P. Lio and N. Goldman (2001) Molecular phylogenetics: State-of-the-art methods for looking into the past. Trends in Genetics 17 262-272
    • (2001) Trends in Genetics , vol.17 , pp. 262-272
    • Whelan, S.1    Lio, P.2    Goldman, N.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.